Pisum_sativum_v1_Contig2700

Contig Overview


Name	Pisum_sativum_v1_Contig2700
Unique Name	Pisum_sativum_v1_Contig2700
Type	contig
Organism	Pisum sativum (pea)
Sequence length	588

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
AM161821	EST	AM161821:1..423 +	Pisum sativum unigene v1	n/a
AM161963	EST	AM161963:109..529 +	Pisum sativum unigene v1	n/a
AM162176	EST	AM162176:109..591 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
AM161821	AM161821	Pisum sativum	EST
AM161963	AM161963	Pisum sativum	EST
AM162176	AM162176	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA4_ARATH (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Arabidopsis thaliana GN=MSR4 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.655e-21
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL +QRVPGV+KTEVGY+ G+VHNP+YEDVC GTT
Sbjct:  101 FWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTGTT 139

HSP 2 Score: 49.6766 bits (117), Expect = 7.655e-21
Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 2

Query:  203 VFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQT--RPYSTVTKPSMNLLNKLGFGSGRSSENLDP---AIPQGPDEDIPAPG 433
            +  ++S S P  +    +LS    K  C   QT  RP S    P  NL N+LGFGS R     DP   AI QGPD+D+P+ G
Sbjct:   10 LIAAASLSKPLNSLSKAALSFSRAKPICPFPQTSRRPISVYKSPMNNLFNRLGFGS-RPQAQADPSSAAIAQGPDDDVPSSG 90

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BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA_LACSA (Peptide methionine sulfoxide reductase OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.213e-18
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQRVPGVSKTEVGYTQG +HNP Y D+C+GTTN
Sbjct:  102 FWGVELAFQRVPGVSKTEVGYTQGFLHNPTYNDICSGTTN 141

HSP 2 Score: 35.4242 bits (80), Expect = 9.213e-18
Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 2

Query:  299 TRPYSTVTKPSMNLLNKLGFGSGRSSE-NLDPA-IPQGPDEDIPAPG 433
            T  +S+ T   M+ L +LG G+   ++ ++D + I QGPD+DIPAPG
Sbjct:   45 TLRHSSSTPKIMSWLGRLGXGTRTPADASMDQSSIAQGPDDDIPAPG 91

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BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA_BRANA (Peptide methionine sulfoxide reductase OS=Brassica napus GN=PMSR PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 9.771e-17
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F G EL +QRVPGV+KTEVGY+ G V NP YEDVC+ TT
Sbjct:  100 FWGAELAYQRVPGVTKTEVGYSHGFVDNPTYEDVCSETT 138

HSP 2 Score: 44.669 bits (104), Expect = 9.771e-17
Identity = 25/61 (40.98%), Postives = 32/61 (52.46%), Query Frame = 2

Query:  254 SLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSENL-DPAIPQGPDEDIPAPG 433
            SLS+ +   S F    R  S    P  NL  +LGFGS    +     AI QGPD+D+P+PG
Sbjct:   29 SLSKRAKPTSPFPKTARSISVYKSPMNNLFTRLGFGSRPQPDPAASSAIAQGPDDDVPSPG 89

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA3_ARATH (Peptide methionine sulfoxide reductase A3 OS=Arabidopsis thaliana GN=MSRA3 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.813e-16
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL FQRVPGV++TE GYTQG V NP+Y DVC+GTT
Sbjct:   45 FWGVELAFQRVPGVTQTEAGYTQGTVDNPSYGDVCSGTT 83

HSP 2 Score: 39.6614 bits (91), Expect = 2.813e-16
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 2

Query:  332 MNLLNKLGFGSGRSSENLDPA-IPQGPDEDIPAPG 433
            MN+LN+LG GS   + N+DP+ I QG D+D PAPG
Sbjct:    1 MNILNRLGLGSSGQT-NMDPSPIAQGNDDDTPAPG 34

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA1_ARATH (Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana GN=MSRA1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.656e-16
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F  VEL +QRVPGV++TEVGY+QG+ H+P+Y+DVC+GTTN
Sbjct:   45 FWSVELAYQRVPGVTQTEVGYSQGITHDPSYKDVCSGTTN 84

HSP 2 Score: 38.1206 bits (87), Expect = 3.656e-16
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 2

Query:  332 MNLLNKLGFGSGRSSENLDPA-IPQGPDEDIPAPG 433
            MN+LNKLG GS R + N+DP+ I Q  D++ PAPG
Sbjct:    1 MNILNKLGIGSSRQT-NMDPSPIAQVIDDEAPAPG 34

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA4_ORYSJ (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRA4 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 1.494e-13
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL FQRVPGV++TEVGY+QG +H+P YEDVC G T
Sbjct:  106 FWGVELAFQRVPGVTRTEVGYSQGNLHDPTYEDVCTGAT 144

HSP 2 Score: 30.4166 bits (67), Expect = 1.494e-13
Identity = 21/52 (40.38%), Postives = 28/52 (53.85%), Query Frame = 2

Query:  290 SSQTRPYSTVTKPSMNLLNKLGFG----SGRSSENLDPAIPQGPDEDIPAPG 433
            S+ T   +  +  +M+ L KLG G    S R+S     A+ QGPDED PA G
Sbjct:   45 STTTTQTTRTSFAAMSWLGKLGLGGLGGSPRASA-ASAALAQGPDEDRPAAG 95

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA2_ARATH (Peptide methionine sulfoxide reductase A2 OS=Arabidopsis thaliana GN=MRSA2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.219e-12
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQR+PGV+ TEVGYT G+ HNP+YEDVC  TTN
Sbjct:   61 FWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTNTTN 100

HSP 2 Score: 24.6386 bits (52), Expect = 1.219e-12
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2

Query:  395 IPQGPDEDIPAPG 433
            I Q PD D+PAPG
Sbjct:   38 IAQEPDNDVPAPG 50

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA_SOLLC (Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum GN=E4 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.645e-8
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL FQRV GV KTEVGY+QG VH+P Y+ +C+GTT
Sbjct:   38 FWGVELAFQRVGGVVKTEVGYSQGNVHDPNYKLICSGTT 76

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSRA_FRAAN (Peptide methionine sulfoxide reductase OS=Fragaria ananassa PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 2.805e-8
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = 3

Query:  441 LLNLVLAAFXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            L       F G EL FQRV GV KTEVGY+QG VH+P Y  VC+GTTN
Sbjct:   25 LAQFASGCFWGSELRFQRVVGVIKTEVGYSQGHVHDPNYRLVCSGTTN 72

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Match: MSR21_ORYSJ (Peptide methionine sulfoxide reductase A2-1 OS=Oryza sativa subsp. japonica GN=MSRA2-1 PE=2 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 4.785e-8
Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 3

Query:  429 QACSLLNLVLAAFXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            +   L       F  VEL +QR+PGV++TEVGY+QG  H P Y DVC G T
Sbjct:   23 EGLELAQFAAGCFWSVELTYQRLPGVARTEVGYSQGHRHEPTYRDVCGGGT 73

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BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: B7FJB1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.830e-47
Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 2

Query:  197 LQVFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSENLDPAIPQGPDEDIPAPG 433
            L VF SSSFSTPAKT FLPSLSRFSVK SC  S TRP+ TVTKPSMNLLNKLGFGSGRSSE++D  IPQGPD+DIPAPG
Sbjct:   19 LLVFGSSSFSTPAKTKFLPSLSRFSVKHSCLFSPTRPHFTVTKPSMNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPG 97

HSP 2 Score: 80.4925 bits (197), Expect = 6.830e-47
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVELVFQRVPGVSKTEVGYTQGL+HNP YEDVC+GTTN
Sbjct:  108 FWGVELVFQRVPGVSKTEVGYTQGLLHNPTYEDVCSGTTN 147

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: C6TLL9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.365e-44
Identity = 64/98 (65.31%), Postives = 72/98 (73.47%), Query Frame = 2

Query:  140 MLLKLLPXXXXXXXXXXXXLQVFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSENLDPAIPQGPDEDIPAPG 433
            MLLK L             L VF SSS S+PAKT FLPSLSRFSVKR CF SQTRP+ +V KPSMN LN+LGFGS R+ EN+D +IPQGPD+DIPAPG
Sbjct:    1 MLLKCLAAISSSYTTTSNSLLVFASSSLSSPAKTKFLPSLSRFSVKRLCFLSQTRPHISVNKPSMNPLNRLGFGSARAPENMDSSIPQGPDDDIPAPG 98

HSP 2 Score: 78.5666 bits (192), Expect = 1.365e-44
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQRVPGV+KTEVGYTQGLVHNP YEDVC GTTN
Sbjct:  109 FWGVELAFQRVPGVTKTEVGYTQGLVHNPTYEDVCTGTTN 148

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: C6TDT0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.939e-44
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 2

Query:  197 LQVFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSENLDPAIPQGPDEDIPAPG 433
            L VF SSS S+PAKT FLPSLSRFSVKR CF SQTRP+ +V KPSMNLLN+LGFGS R+ EN+D +IPQGPD+DIPAPG
Sbjct:   19 LLVFASSSLSSPAKTKFLPSLSRFSVKRLCFLSQTRPHISVNKPSMNLLNRLGFGSARAPENMDSSIPQGPDDDIPAPG 97

HSP 2 Score: 77.411 bits (189), Expect = 3.939e-44
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQRVPGV++TEVGYTQGLVHNP YEDVC GTTN
Sbjct:  108 FWGVELAFQRVPGVTRTEVGYTQGLVHNPTYEDVCTGTTN 147

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: C6TEM0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.550e-42
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 2

Query:  197 LQVFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSENLDPAIPQGPDEDIPAPG 433
            L VF SSS S+PAKT FLPSLSRFSVKR  F SQT P   V KPSMNLLN+LGFGS R++EN+D +IPQGPD+DIPAPG
Sbjct:   19 LLVFASSSLSSPAKTKFLPSLSRFSVKRPYFLSQTYPRIAVNKPSMNLLNRLGFGSARATENMDSSIPQGPDDDIPAPG 97

HSP 2 Score: 78.5666 bits (192), Expect = 3.550e-42
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQRVPGV+KTEVGYTQGLVHNP YEDVC GTTN
Sbjct:  108 FWGVELAFQRVPGVTKTEVGYTQGLVHNPTYEDVCTGTTN 147

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: B9R9Z9_RICCO (Methionine sulfoxide reductase, putative OS=Ricinus communis GN=RCOM_1502430 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.670e-24
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL FQRVPGV+KTEVGYTQGL+HNP+YEDVC GTT
Sbjct:  104 FWGVELAFQRVPGVTKTEVGYTQGLMHNPSYEDVCTGTT 142

HSP 2 Score: 61.6178 bits (148), Expect = 1.670e-24
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 2

Query:  212 SSSFSTP---AKTNFLPSLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSENLDPAIPQGPDEDIPAPG 433
            SSS + P      NF  SLS    K   +   ++P S   +P MN+LNKLGFG+      +DP IPQGPD+D+PAPG
Sbjct:   22 SSSLTKPFVSLSKNFQSSLS----KPFTYPQNSKPISYY-RPPMNILNKLGFGTKPDPSTMDPTIPQGPDDDVPAPG 93

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: Q6QPJ4_9ROSI (Methionine sulfoxide reductase A OS=Populus trichocarpa x Populus deltoides PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.691e-23
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQRVPGV+KTEVGYTQGL+HNP YEDVC GTTN
Sbjct:  104 FWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTN 143

HSP 2 Score: 53.9138 bits (128), Expect = 8.691e-23
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 2

Query:  203 VFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSE--NLDPAIPQGPDEDIPAPG 433
            + +S  F +P+  + L     F+  R+      +P S    P  N+L+KLGFG+ RS +   +DP IPQGPD+D+PAPG
Sbjct:   21 LLLSKPFLSPSAKSQLSHSKPFNFPRTL-----KPISYYKPPMANILSKLGFGT-RSPDPSTMDPTIPQGPDDDLPAPG 93

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: A9PFX3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.491e-22
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL FQRVPGV+KTEVGYTQGL HNP+YEDVC GTT
Sbjct:  103 FWGVELAFQRVPGVTKTEVGYTQGLSHNPSYEDVCTGTT 141

HSP 2 Score: 54.299 bits (129), Expect = 5.491e-22
Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 2

Query:  203 VFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQTRPYSTVTKPSMNLLNKLGFGSGRSSE--NLDPAIPQGPDEDIPAPG 433
            + +S  F +P+  + L     F+  R+      +P S   KP MN+L+KLGFG+ RS +   +DP IPQGPD+D+PAPG
Sbjct:   21 LLLSKPFLSPSAKSQLSHSKPFNFPRTL-----KPISYY-KPPMNILSKLGFGT-RSPDPSTMDPTIPQGPDDDLPAPG 92

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: B9ICF7_POPTR (Methionine sulfoxide reductase type OS=Populus trichocarpa GN=PtrcMsrA3 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.372e-22
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQRVPGV+KTEVGYTQGL+HNP YEDVC+GTTN
Sbjct:   46 FWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCSGTTN 85

HSP 2 Score: 50.0618 bits (118), Expect = 9.372e-22
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 2

Query:  332 MNLLNKLGFGSGRSSE--NLDPAIPQGPDEDIPAPG 433
            MN+LNKLGFG  RS +   +DP IPQGPD+D+PAPG
Sbjct:    1 MNILNKLGFGP-RSPDPSTMDPTIPQGPDDDLPAPG 35

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: B9NKV3_POPTR (Methionine sulfoxide reductase type (Fragment) OS=Populus trichocarpa GN=PtrcMsrA6 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.933e-22
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQRVPGV+KTEVGYTQGL+HNP YEDVC+GTTN
Sbjct:   46 FWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCSGTTN 85

HSP 2 Score: 50.0618 bits (118), Expect = 9.933e-22
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 2

Query:  332 MNLLNKLGFGSGRSSE--NLDPAIPQGPDEDIPAPG 433
            MN+LNKLGFG  RS +   +DP IPQGPD+D+PAPG
Sbjct:    1 MNILNKLGFGP-RSPDPSTMDPTIPQGPDDDLPAPG 35

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Match: D7MGJ3_ARALY (Protein-methionine-s-oxide reductase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492320 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.636e-21
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL +QRVPGV+KTEVGY+ GL+HNP+YEDVC GTT
Sbjct:  100 FWGVELAYQRVPGVTKTEVGYSHGLMHNPSYEDVCTGTT 138

HSP 2 Score: 53.9138 bits (128), Expect = 7.636e-21
Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 2

Query:  212 SSSFSTPAKTNFLPSLSRFSVKRSC-FSSQTRPYSTVTKPSMNLLNKLGFGSGRSSENLDP---AIPQGPDEDIPAPG 433
            ++S S P  +    +LS    K  C F   +RP S    P  NL N+LGFGS R    +DP   AI QGPD+D+P+PG
Sbjct:   13 AASLSKPLHSLSKAALSFSRAKPLCPFPQTSRPISVYKSPMNNLFNRLGFGS-RPQAQVDPTSAAIAQGPDDDVPSPG 89

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TAIR peptide
Match: AT4G25130.1 (| Symbols: PMSR4 | peptide met sulfoxide reductase 4 | chr4:12898802-12899998 REVERSE LENGTH=258)

HSP 1 Score: 71.2478 bits (173), Expect = 8.034e-22
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL +QRVPGV+KTEVGY+ G+VHNP+YEDVC GTT
Sbjct:  101 FWGVELAYQRVPGVTKTEVGYSHGIVHNPSYEDVCTGTT 139

HSP 2 Score: 49.6766 bits (117), Expect = 8.034e-22
Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 2

Query:  203 VFVSSSFSTPAKTNFLPSLSRFSVKRSCFSSQT--RPYSTVTKPSMNLLNKLGFGSGRSSENLDP---AIPQGPDEDIPAPG 433
            +  ++S S P  +    +LS    K  C   QT  RP S    P  NL N+LGFGS R     DP   AI QGPD+D+P+ G
Sbjct:   10 LIAAASLSKPLNSLSKAALSFSRAKPICPFPQTSRRPISVYKSPMNNLFNRLGFGS-RPQAQADPSSAAIAQGPDDDVPSSG 90

[Close]

BLAST of Pisum_sativum_v1_Contig2700 vs. TAIR peptide
Match: AT5G07470.1 (| Symbols: PMSR3, ATMSRA3 | peptidemethionine sulfoxide reductase 3 | chr5:2362760-2364286 REVERSE LENGTH=202)

HSP 1 Score: 65.855 bits (159), Expect = 2.947e-17
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTT 581
            F GVEL FQRVPGV++TE GYTQG V NP+Y DVC+GTT
Sbjct:   45 FWGVELAFQRVPGVTQTEAGYTQGTVDNPSYGDVCSGTT 83

HSP 2 Score: 39.6614 bits (91), Expect = 2.947e-17
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 2

Query:  332 MNLLNKLGFGSGRSSENLDPA-IPQGPDEDIPAPG 433
            MN+LN+LG GS   + N+DP+ I QG D+D PAPG
Sbjct:    1 MNILNRLGLGSSGQT-NMDPSPIAQGNDDDTPAPG 34

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BLAST of Pisum_sativum_v1_Contig2700 vs. TAIR peptide
Match: AT5G61640.1 (| Symbols: PMSR1, ATMSRA1 | peptidemethionine sulfoxide reductase 1 | chr5:24775107-24776147 FORWARD LENGTH=202)

HSP 1 Score: 67.0106 bits (162), Expect = 3.830e-17
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F  VEL +QRVPGV++TEVGY+QG+ H+P+Y+DVC+GTTN
Sbjct:   45 FWSVELAYQRVPGVTQTEVGYSQGITHDPSYKDVCSGTTN 84

HSP 2 Score: 38.1206 bits (87), Expect = 3.830e-17
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 2

Query:  332 MNLLNKLGFGSGRSSENLDPA-IPQGPDEDIPAPG 433
            MN+LNKLG GS R + N+DP+ I Q  D++ PAPG
Sbjct:    1 MNILNKLGIGSSRQT-NMDPSPIAQVIDDEAPAPG 34

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BLAST of Pisum_sativum_v1_Contig2700 vs. TAIR peptide
Match: AT5G07460.1 (| Symbols: PMSR2, ATMSRA2 | peptidemethionine sulfoxide reductase 2 | chr5:2360844-2361885 REVERSE LENGTH=218)

HSP 1 Score: 68.5514 bits (166), Expect = 1.276e-13
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 3

Query:  465 FXGVELVFQRVPGVSKTEVGYTQGLVHNPAYEDVCAGTTN 584
            F GVEL FQR+PGV+ TEVGYT G+ HNP+YEDVC  TTN
Sbjct:   61 FWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTNTTN 100

HSP 2 Score: 24.6386 bits (52), Expect = 1.276e-13
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2

Query:  395 IPQGPDEDIPAPG 433
            I Q PD D+PAPG
Sbjct:   38 IAQEPDNDVPAPG 50

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2700 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2700 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
MSRA4_ARATH	7.655e-21	76.92	Peptide methionine sulfoxide reductase A4, chlorop...	[more]
MSRA_LACSA	9.213e-18	80.00	Peptide methionine sulfoxide reductase OS=Lactuca ...	[more]
MSRA_BRANA	9.771e-17	69.23	Peptide methionine sulfoxide reductase OS=Brassica...	[more]
MSRA3_ARATH	2.813e-16	74.36	Peptide methionine sulfoxide reductase A3 OS=Arabi...	[more]
MSRA1_ARATH	3.656e-16	67.50	Peptide methionine sulfoxide reductase A1 OS=Arabi...	[more]
MSRA4_ORYSJ	1.494e-13	71.79	Peptide methionine sulfoxide reductase A4, chlorop...	[more]
MSRA2_ARATH	1.219e-12	72.50	Peptide methionine sulfoxide reductase A2 OS=Arabi...	[more]
MSRA_SOLLC	1.645e-8	69.23	Peptide methionine sulfoxide reductase (Fragment) ...	[more]
MSRA_FRAAN	2.805e-8	60.42	Peptide methionine sulfoxide reductase OS=Fragaria...	[more]
MSR21_ORYSJ	4.785e-8	49.02	Peptide methionine sulfoxide reductase A2-1 OS=Ory...	[more]

BLAST of Pisum_sativum_v1_Contig2700 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FJB1_MEDTR	6.830e-47	82.28	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TLL9_SOYBN	1.365e-44	65.31	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TDT0_SOYBN	3.939e-44	75.95	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TEM0_SOYBN	3.550e-42	73.42	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9R9Z9_RICCO	1.670e-24	84.62	Methionine sulfoxide reductase, putative OS=Ricinu...	[more]
Q6QPJ4_9ROSI	8.691e-23	85.00	Methionine sulfoxide reductase A OS=Populus tricho...	[more]
A9PFX3_POPTR	5.491e-22	84.62	Putative uncharacterized protein OS=Populus tricho...	[more]
B9ICF7_POPTR	9.372e-22	85.00	Methionine sulfoxide reductase type OS=Populus tri...	[more]
B9NKV3_POPTR	9.933e-22	85.00	Methionine sulfoxide reductase type (Fragment) OS=...	[more]
D7MGJ3_ARALY	7.636e-21	76.92	Protein-methionine-s-oxide reductase OS=Arabidopsi...	[more]

BLAST of Pisum_sativum_v1_Contig2700 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G25130.1	8.034e-22	76.92	\| Symbols: PMSR4 \| peptide met sulfoxide reductase...	[more]
AT5G07470.1	2.947e-17	74.36	\| Symbols: PMSR3, ATMSRA3 \| peptidemethionine sulf...	[more]
AT5G61640.1	3.830e-17	67.50	\| Symbols: PMSR1, ATMSRA1 \| peptidemethionine sulf...	[more]
AT5G07460.1	1.276e-13	72.50	\| Symbols: PMSR2, ATMSRA2 \| peptidemethionine sulf...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 12..23 score
None	No IPR available	PANTHER	PTHR10173	METHIONINE SULFOXIDE REDUCTASE	coord: 41..80 score: 6.4
None	No IPR available	SEG	seg	seg	coord: 22..36 score
IPR002569	Peptide methionine sulphoxide reductase MsrA	GENE3D	3.30.1060.10	no description	coord: 31..80 score: 6.5
IPR002569	Peptide methionine sulphoxide reductase MsrA	PFAM	PF01625	PMSR	coord: 40..80 score: 1.8
IPR002569	Peptide methionine sulphoxide reductase MsrA	SUPERFAMILY	55068	Peptide methionine sulfoxide reductase	coord: 43..80 score: 1.1

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2700 ID=Pisum_sativum_v1_Contig2700; Name=Pisum_sativum_v1_Contig2700; organism=Pisum sativum; type=contig; length=588bp
GTTCTTTTTGCCGTGAACGAATCCTCATCCTCTTTCTCTCTCACTCTAAC
AACCACCGAAGCCTCTCTCTCTCTCTCGGATGAGAATTTGTGGAGCAGGG
TATATTGAAATTGATTATAGTTTCTAGATAAGGATTCTGATGTTACTCAA
ACTCTTACCAGCAACCAGCAGCACCTATAGCACTGCGTCTAATTCCCTGC
AAGTGTTTGTTTCTTCTTCCTTCTCTACTCCAGCCAAAACCAATTTCCTA
CCCTCACTTTCTAGATTTTCTGTCAAGCGTTCTTGCTTCTCTTCACAGAC
CCGACCCTATTCTACTGTGACCAAGCCCTCCATGAACCTTCTGAACAAAC
TTGGATTTGGCAGTGGAAGGTCATCAGAGAATCTGGATCCAGCCATTCCT
CAGGGACCAGATGAAGATATACCAGCACCAGGCCTGCAGTTTGCTCAATT
TGGTGCTGGCTGCTTTTNGGGGTGTTGAATTGGTCTTCCAGAGGGTGCCG
GGAGTGAGTAAGACAGAGGTTGGTTACACCCAGGGGCTTGTGCATAATCC
GGCGTATGAAGATGTGTGTGCAGGGACCACAAACCAAC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Biological Process**
Term	Definition
GO:0019538	protein metabolic process
GO:0055114	obsolete oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR002569	Met_Sox_Rdtase_MsrA_dom

Search form

Pisum_sativum_v1_Contig2700