Pisum_sativum_v1_Contig2718

Contig Overview
NamePisum_sativum_v1_Contig2718
Unique NamePisum_sativum_v1_Contig2718
Typecontig
OrganismPisum sativum (pea)
Sequence length680
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FG532720ESTFG532720:6..453 +Pisum sativum unigene v1n/a
AM161675ESTAM161675:1..680 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG532720FG532720Pisum sativumEST
AM161675AM161675Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2718 vs. TrEMBL
Match: A5C7N2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027594 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.675e-16
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 1 
Query:  181 N*LIPTNRFSGSDFENHAFEKPSHAAATSIEKHTHPVIGNVDMHHDKDKRKKEVEAKLQVLNAKKHSLVLVLKQILNAEEDLKRRNSLQ 447
            N ++P N    +D   H   +   A A S   +      NVD  +D++KRK+E+E KLQ+LNAKKH+LV VLKQILNAEE+LKRRN++Q
Sbjct:  134 NPIVPGNASDPAD--GHGNSQGEKAVAVSQNPNLE-ANKNVDAVNDQEKRKREIEEKLQILNAKKHNLVQVLKQILNAEEELKRRNNMQ 219

HSP 2 Score: 30.8018 bits (68), Expect = 8.675e-16
Identity = 18/51 (35.29%), Postives = 24/51 (47.06%), Query Frame = 2 
Query:  473 PSVPPKADGTNDTGSDTKYLAXXXXXXXXXXXXXXV-EPDDFTNHNHNMQH 622
            PS P   D TND+GS T+ +                 EPDD +NHN + +H
Sbjct:  225 PSGPLHIDTTNDSGSLTRQVTPRLGSDANLGGEMEGGEPDDISNHNMHSRH 275
[Close]
BLAST of Pisum_sativum_v1_Contig2718 vs. TrEMBL
Match: B9I329_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_661919 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.915e-12
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 1 
Query:  304 DMHHDKDKRKKEVEAKLQVLNAKKHSLVLVLKQILNAEEDLKRRNSLQ 447
            ++  +K+KRK+E+E KLQVLNAKKH+LV  LKQILN EE+LKRRNS Q
Sbjct:  155 ELDEEKEKRKREIEDKLQVLNAKKHNLVKALKQILNVEEELKRRNSTQ 202

HSP 2 Score: 25.409 bits (54), Expect = 4.915e-12
Identity = 15/51 (29.41%), Postives = 24/51 (47.06%), Query Frame = 2 
Query:  473 PSVPPKADGTNDTGSDTKY-LAXXXXXXXXXXXXXXVEPDDFTNHNHNMQH 622
            PSV  + D +ND+GS T++                  E +D +NHN + +H
Sbjct:  208 PSVQLQVDVSNDSGSMTRHPTPRMGSEANPGGDIEGGEAEDISNHNTHSRH 258
[Close]
BLAST of Pisum_sativum_v1_Contig2718 vs. TrEMBL
Match: D7LRG3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485149 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.405e-10
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 1 
Query:  322 DKRKKEVEAKLQVLNAKKHSLVLVLKQILNAEEDLKRRNSLQQQG 456
            +K++KEVE +LQVLNAKKH+LV VLKQILNAEE+LKRR  +QQQG
Sbjct:  184 EKKQKEVEERLQVLNAKKHNLVQVLKQILNAEEELKRRGCMQQQG 228
[Close]
BLAST of Pisum_sativum_v1_Contig2718 vs. TrEMBL
Match: Q9STS8_ARATH (AT3g47850/T23J7_180 OS=Arabidopsis thaliana GN=T23J7.180 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.130e-10
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 1 
Query:  316 DKDKRKKEVEAKLQVLNAKKHSLVLVLKQILNAEEDLKRRNSLQQQG-VVMLRP 474
            + + ++KEVE +LQVLNAKKH+LV VLKQILNAEE+LKRR+ +QQQG  V  RP
Sbjct:  150 ETELKRKEVEERLQVLNAKKHNLVQVLKQILNAEEELKRRSYMQQQGTTVATRP 203
[Close]
BLAST of Pisum_sativum_v1_Contig2718 vs. TrEMBL
Match: Q8LCV7_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.130e-10
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 1 
Query:  316 DKDKRKKEVEAKLQVLNAKKHSLVLVLKQILNAEEDLKRRNSLQQQG-VVMLRP 474
            + + ++KEVE +LQVLNAKKH+LV VLKQILNAEE+LKRR+ +QQQG  V  RP
Sbjct:  150 ETELKRKEVEERLQVLNAKKHNLVQVLKQILNAEEELKRRSYMQQQGTTVATRP 203
[Close]
BLAST of Pisum_sativum_v1_Contig2718 vs. TrEMBL
Match: B9R913_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1512970 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.650e-9
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 1 
Query:  313 HDKDKRKKEVEAKLQVLNAKKHSLVLVLKQILNAEEDLKRRNSLQ 447
            +D++KR+ EVE KLQVLN KKHSLV VLKQILN EE+LKRRN  Q
Sbjct:  183 NDQEKRQNEVEEKLQVLNQKKHSLVQVLKQILNVEEELKRRNIAQ 227
[Close]
BLAST of Pisum_sativum_v1_Contig2718 vs. TAIR peptide
Match: AT3G47850.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr3:17654256-17656000 REVERSE LENGTH=352)

HSP 1 Score: 69.3218 bits (168), Expect = 2.147e-12
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = 1 
Query:  316 DKDKRKKEVEAKLQVLNAKKHSLVLVLKQILNAEEDLKRRNSLQQQG-VVMLRP 474
            + + ++KEVE +LQVLNAKKH+LV VLKQILNAEE+LKRR+ +QQQG  V  RP
Sbjct:  180 ETELKRKEVEERLQVLNAKKHNLVQVLKQILNAEEELKRRSYMQQQGTTVATRP 233
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2718 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
A5C7N2_VITVI8.675e-1649.44Putative uncharacterized protein OS=Vitis vinifera... [more]
B9I329_POPTR4.915e-1268.75Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LRG3_ARALY1.405e-1075.56Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9STS8_ARATH3.130e-1066.67AT3g47850/T23J7_180 OS=Arabidopsis thaliana GN=T23... [more]
Q8LCV7_ARATH3.130e-1066.67Putative uncharacterized protein OS=Arabidopsis th... [more]
B9R913_RICCO2.650e-973.33Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of Pisum_sativum_v1_Contig2718 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G47850.12.147e-1266.67| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..38
score: NAcoord: 59..71
score
NoneNo IPR availableSEGsegsegcoord: 22..45
score
NoneNo IPR availableSEGsegsegcoord: 7..27
score
NoneNo IPR availableSEGsegsegcoord: 45..57
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2718 ID=Pisum_sativum_v1_Contig2718; Name=Pisum_sativum_v1_Contig2718; organism=Pisum sativum; type=contig; length=680bp
ACCGAACACCAGATCTGCCTCGTCGATGGCTTATGCCAAACCCTAAAATC
TCTCTCAAAGATTTCAAATCCCTTTTAGCTCGTCGTTCTAAGGCACTCTC
TCGTTCTTCCAACCCTAACCCTAACCCTCTATCCTCCGCCACAAACCGTA
AACAGCTTCAACTTTCTAATCAACCTCCAGAACTAGTTGATTCCAACAAA
CCGCTTCAGTGGATCCGATTTCGAGAATCATGCTTTCGAGAAACCATCTC
ACGCTGCTGCAACTTCCATCGAAAAACATACCCACCCTGTTATTGGAAAT
GTGGATATGCATCATGATAAAGACAAAAGGAAAAAAGAAGTTGAGGCCAA
GCTACAAGTTTTGAATGCCAAGAAACATAGTCTGGTGTTAGTGTTGAAGC
AGATTTTAAATGCGGAGGAGGATTTAAAGAGACGGAACAGTTTGCAACAG
CAAGGGGTTGTGATGCTGCGGCCCTTCTGTTCCGCCTAAAGCTGATGGGA
CCAATGATACTGGGTCAGATACCAAGTATTTGGCTCTGAGGTTGGGCTCT
GATGGAAATCTTGGTGACCTCGATGGTGTTGAACCTGATGATTTTACTAA
TCATAATCATAATATGCAGCATTCTCAACTTGTTCTTCCGACCAGTAGCA
TGTCTCCTTCATCAGAATCCCCATCTTACG
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