Pisum_sativum_v1_Contig2740

Contig Overview
NamePisum_sativum_v1_Contig2740
Unique NamePisum_sativum_v1_Contig2740
Typecontig
OrganismPisum sativum (pea)
Sequence length925
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD861228ESTCD861228:1..562 +Pisum sativum unigene v1n/a
AM161932ESTAM161932:212..714 -Pisum sativum unigene v1n/a
FG538136ESTFG538136:359..925 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD861228CD861228Pisum sativumEST
AM161932AM161932Pisum sativumEST
FG538136FG538136Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig2740 vs. TrEMBL
Match: C6TED3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.199e-36
Identity = 106/208 (50.96%), Postives = 124/208 (59.62%), Query Frame = 2
Query:  290 TQPIDK--PVVKEAPSMAVDNV---ETEEHTVKSDVTQ----PIDGPVVKEAPSMVVDNVETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSSSGSTNRFSYETYEXXXXXXXWLK-EDSSEMVGPSGTSIHTGGDDEDVSFSDLEEDDGDVH-AXXXXXXXXXXXXXXXRDWVQLGRSSPNSDKDVN--XXXXXXXXXXXARNSMTK 874
            TQ +DK     KE+   A  N+   E E+H       Q    P+     + APS+VV +VE  +H V     + ID SVVKEAP+I SAEQSSSGSTNRF  ETY+       WLK ED+SEMVGPSGTS+HT G+DEDVSFSDLEEDDGDVH +               RDWVQLGRSSPNSDKD+N             ARNS+TK
Sbjct:  126 TQALDKRSKEKKESDLSAGGNIPSKEEEQHLFVPSNAQLEPVPLQTSAAEAAPSVVVSDVEMEKHVVP----EIIDKSVVKEAPVISSAEQSSSGSTNRFLDETYD--DDADDWLKEEDTSEMVGPSGTSVHT-GNDEDVSFSDLEEDDGDVHESYKKTRSGSDSSTKDSRDWVQLGRSSPNSDKDINSVEGKHVGSQHSSARNSVTK 326          

HSP 2 Score: 116.701 bits (291), Expect = 3.044e-24
Identity = 64/103 (62.14%), Postives = 79/103 (76.70%), Query Frame = 3
Query:    3 LHPKLSKNDAVFLSTPQIMEARAMLTQALDIRRKEKKEPDLI---SIPSKEEEQERHLFVPSNAQLESVPLQTSAVEESPSMAVANCRDRRGILLKVIQLNLL 302
            +HP+LSK DA  LSTPQIMEARAMLTQALD R KEKKE DL    +IPSKEEEQ  HLFVPSNAQLE VPLQTSA E +PS+ V++    + ++ ++I  +++
Sbjct:  101 VHPRLSKTDAAILSTPQIMEARAMLTQALDKRSKEKKESDLSAGGNIPSKEEEQ--HLFVPSNAQLEPVPLQTSAAEAAPSVVVSDVEMEKHVVPEIIDKSVV 201          
BLAST of Pisum_sativum_v1_Contig2740 vs. TrEMBL
Match: B9SH31_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0581590 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.976e-20
Identity = 74/190 (38.95%), Postives = 94/190 (49.47%), Query Frame = 2
Query:  272 TVKSDSTQPIDKPVVKEAPSMAVDNVETEEHTVKSDVTQPIDGPVVKEA------PSMVVDNVETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSSSGSTNRFSYETYEXXXXXXXWLKEDSSEMVGPSGTSIHTGGDDEDVSFSDLEEDDGDVH-AXXXXXXXXXXXXXXXRDWVQLGRSSPNSDKDVN 820
            T  S ST+    P   E P       ETE   +K+   + I       A      PS+V D +ET +H V+   ++ ID +VV+E P   +  Q  S ST+    E  E       WL E+SS MVGPSGT+IH   +DEDVSFSDLEEDDG+V  +               RDWVQL  SS  S KD+N
Sbjct:  283 TGSSISTKTAGLP--HEEPLSVPSRPETESAPLKTSSIEVISSTFAANAIGNEASPSVVADELETEKHLVQSTEMRIIDKAVVEEEPAYQAKHQYLSSSTSNVPDEKSEDDGDD--WLNEESSVMVGPSGTTIHI-ENDEDVSFSDLEEDDGEVPVSYKKVTSGSDASSKDPRDWVQLSESSALSVKDIN 467          

HSP 2 Score: 64.3142 bits (155), Expect = 1.793e-8
Identity = 40/88 (45.45%), Postives = 49/88 (55.68%), Query Frame = 3
Query:    3 LHPKLSKNDAVFLSTPQIMEARAMLTQALDIRRKEKKE-----PDLISIPSKEEEQERHLFVPSNAQLESVPLQTSAVEESPSMAVAN 251
            LHP+LSK DA  LSTPQ++EARAML+  L  R K  K         IS  +     E  L VPS  + ES PL+TS++E   S   AN
Sbjct:  241 LHPRLSKQDAELLSTPQVVEARAMLSHELPNRAKPTKSGWSETGSSISTKTAGLPHEEPLSVPSRPETESAPLKTSSIEVISSTFAAN 328          
BLAST of Pisum_sativum_v1_Contig2740 vs. TrEMBL
Match: B9IBL7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571988 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.776e-17
Identity = 60/135 (44.44%), Postives = 77/135 (57.04%), Query Frame = 2
Query:  416 APSMVVDNVETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSSSGSTNRFSYETYEXXXXXXXWLKEDSSEMVGPSGTSIHTGGDDEDVSFSDLEEDDGDVHA-XXXXXXXXXXXXXXXRDWVQLGRSSPNSDKDV 817
            APS V    ET +H V+   +Q ID SVV+E  +  +  Q SS S++    E  +       WLK+DSSEM+G SG+S+  G +DEDVSFSDLEEDDGD  A                +DWVQL RSS +S KD+
Sbjct:  339 APSFVSVESETEKHPVESTQMQIIDKSVVEEGKVDQTKHQHSSSSSSSGILEE-KFDDDGDDWLKDDSSEMIGVSGSSMPLG-NDEDVSFSDLEEDDGDEPASYKKVASGSDCATKGSQDWVQLSRSSADSVKDI 471          

HSP 2 Score: 71.633 bits (174), Expect = 1.123e-10
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 3
Query:    3 LHPKLSKNDAVFLSTPQIMEARAMLTQALDIRRKEKKEPDLISIPSKEEE----QERHLFVPSNAQLESVPLQTSAVEE-SPSMA 242
            LHP+LSK+DA  LSTPQI+EARAML+  L  + K K  PD   + +   +     E  L VPS A+ ESVP+ TS +E  SP++A
Sbjct:  246 LHPRLSKHDAELLSTPQIVEARAMLSHELQNKAKAKSTPDWSGVDTSNVKADLPHEESLSVPSRAKSESVPIMTSGIEAVSPTLA 330          
BLAST of Pisum_sativum_v1_Contig2740 vs. TrEMBL
Match: D7TZ20_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_686.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00002340001 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.930e-16
Identity = 63/163 (38.65%), Postives = 84/163 (51.53%), Query Frame = 2
Query:  344 NVETEEHTVKSDVTQ----PIDGPVVKEAPSMVVDNVETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSS-SGSTNRFSYETYEXXXXXXXWLKEDSSEMVGPSGTSIHTGGDDEDVSFSDLEEDDGDV-HAXXXXXXXXXXXXXXXRDWVQLGRSSPNSDKD 814
            N   EEH      +Q    P+    ++ A S+V  +  T +H V    +Q +D SVV+E P+     Q S SGS++R   E YE       WLKE+SSE+VG +G +     ++EDVSFSDLEEDDGD   +               RDWVQL  SS +S KD
Sbjct: 2570 NPPHEEHPSVPSSSQSESLPLKTSSIESATSIVASDFPTEKHTVLSTKVQIVDKSVVEEGPVKEIKNQDSLSGSSSRILDEKYE--DDGDDWLKEESSEIVG-AGRATMPLVNEEDVSFSDLEEDDGDAPTSYKKVTYGSDSSTKDSRDWVQLSSSSADSAKD 2729          
BLAST of Pisum_sativum_v1_Contig2740 vs. TrEMBL
Match: Q9M2X8_ARATH (AT3g49800/T16K5_150 OS=Arabidopsis thaliana GN=T16K5.150 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 4.869e-13
Identity = 43/143 (30.07%), Postives = 63/143 (44.06%), Query Frame = 2
Query:  293 QPIDKPVVKEAPSMAVDNVETEEHTVKSDVTQPIDGPVVKEAPSMVVDNVETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSSSGSTNRFSYETYEXXXXXXXWLK-EDSSEMVGPSGTSIHTGGD-DEDVSFSDLEEDDGDV 715
            +P+    V+   S      ETE+HTV++   Q +D PV++E P+    +             +P+ + V   +P +   +                       WLK ED++  V  S T+ H   D DEDVSFSDLEEDD DV
Sbjct:  311 EPVKTITVETIHSAERSEFETEKHTVETKEVQVVDKPVIEERPAPAYHD-------------KPVQSLVTGSSPRVIDVQVDDDAD----------------DWLKDEDNAGTV--SATTNHLVQDVDEDVSFSDLEEDDDDV 422          

HSP 2 Score: 46.9802 bits (110), Expect = 4.869e-13
Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 3
Query:    3 LHPKLSKNDAVFLSTPQIMEARAMLTQALDIRRKEKKEPDLISIPSK-----EEEQERHLFVPSN--AQLESVPLQTSAVE 224
            +HP  SK+DA+ LSTPQ++E+RA+L+  L +R++ K   D + +P       + E    LF P+N   + E  P++T  VE
Sbjct:  243 VHPIFSKHDALTLSTPQVLESRALLSHEL-LRKRNK---DTVVVPESSDRGADSENVEPLFQPTNPSPKSEPEPVKTITVE 319          
BLAST of Pisum_sativum_v1_Contig2740 vs. TrEMBL
Match: B9HFZ2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_215790 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 7.076e-13
Identity = 56/143 (39.16%), Postives = 74/143 (51.75%), Query Frame = 2
Query:  302 DKPVVKEAPSMAVDNVETEEHTVKSDVTQPIDG------PVVKEAPSMVVDNVETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSSSGSTNRFSYETYEXXXXXXXWLKEDSSEMVGPSGTSIHTGGDDEDVSFSDLEEDDGD 712
            D P     PS A    ETE  T+ +  T+          P  +  PS V    E  +H V+   +Q ID  +V+E  +  +  Q SS S++R   E +E       WLK+DSSEM+G SG S+   G+DEDVSFSDLEEDD D
Sbjct:  255 DWPGTLSVPSHA----ETESVTIMTSGTKAAPPTLAAKTPDHETVPSSVSAEPEMEKHPVESTQMQIIDKYIVEEEKVNQAKHQHSSSSSSRILDEKFEDDGDD--WLKDDSSEMIGASGASMPL-GNDEDVSFSDLEEDDED 390          

HSP 2 Score: 62.7734 bits (151), Expect = 5.217e-8
Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 3
Query:    3 LHPKLSKNDAVFLSTPQIMEARAMLTQALDIRRKEKKEPDLISIPSKEEEQERHLFVPSNAQLESVPLQTSAVEESPSMAVANCRDRRGI 272
            LHP+L+K+DA  LSTPQI+EARAML+  L  + K K  PD              L VPS+A+ ESV + TS  + +P    A   D   +
Sbjct:  216 LHPRLTKHDAQLLSTPQIVEARAMLSHELQNKDKAKSTPDWPGT----------LSVPSHAETESVTIMTSGTKAAPPTLAAKTPDHETV 295          
BLAST of Pisum_sativum_v1_Contig2740 vs. TAIR peptide
Match: AT3G49800.1 (| Symbols: | BSD domain-containing protein | chr3:18471957-18473676 REVERSE LENGTH=428)

HSP 1 Score: 52.7582 bits (125), Expect = 2.959e-15
Identity = 43/143 (30.07%), Postives = 63/143 (44.06%), Query Frame = 2
Query:  293 QPIDKPVVKEAPSMAVDNVETEEHTVKSDVTQPIDGPVVKEAPSMVVDNVETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSSSGSTNRFSYETYEXXXXXXXWLK-EDSSEMVGPSGTSIHTGGD-DEDVSFSDLEEDDGDV 715
            +P+    V+   S      ETE+HTV++   Q +D PV++E P+    +             +P+ + V   +P +   +                       WLK ED++  V  S T+ H   D DEDVSFSDLEEDD DV
Sbjct:  311 EPVKTITVETIHSAERSEFETEKHTVETKEVQVVDKPVIEERPAPAYHD-------------KPVQSLVTGSSPRVIDVQVDDDAD----------------DWLKDEDNAGTV--SATTNHLVQDVDEDVSFSDLEEDDDDV 422          

HSP 2 Score: 46.9802 bits (110), Expect = 2.959e-15
Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 3
Query:    3 LHPKLSKNDAVFLSTPQIMEARAMLTQALDIRRKEKKEPDLISIPSK-----EEEQERHLFVPSN--AQLESVPLQTSAVE 224
            +HP  SK+DA+ LSTPQ++E+RA+L+  L +R++ K   D + +P       + E    LF P+N   + E  P++T  VE
Sbjct:  243 VHPIFSKHDALTLSTPQVLESRALLSHEL-LRKRNK---DTVVVPESSDRGADSENVEPLFQPTNPSPKSEPEPVKTITVE 319          
BLAST of Pisum_sativum_v1_Contig2740 vs. TAIR peptide
Match: AT5G65910.1 (| Symbols: | BSD domain-containing protein | chr5:26361592-26363341 REVERSE LENGTH=432)

HSP 1 Score: 56.9954 bits (136), Expect = 1.761e-8
Identity = 55/195 (28.21%), Postives = 82/195 (42.05%), Query Frame = 2
Query:  275 VKSDSTQPIDKPVVKEAPSMAVDN--------VETEEHTVKSDVTQPIDGPVVKEAPSMVVDN------VETNEHAVKGAVIQPIDNSVVKEAPIIPSAEQSSSGSTNRFSYETY--EXXXXXXXWLKEDSSEMV----GPSGTSIHTGGDDEDVSFSDLEEDD---GDVHAXXXXXXXXXXXXXXXR--DWVQL 784
            +  D    +  P V EA SM            VE       + + +P+  P   E  ++ + N      VET++H ++   IQ +D SV++E         +S+ S++RF       E       WL ++ +  V    G S T+   G D+EDVSFSDLEE+D   GDV                 +  DWVQL
Sbjct:  227 LSKDHALLLSTPQVLEARSMLSQELQKRSKLPVEAGSSEANTVIVEPLTVPPSPETAAVKIVNPVESSDVETDKHPIESKEIQIVDKSVIEE-------RSTSTASSSRFINVQVDDEDDDDADDWLNDEETSSVSAIGGRSTTNHPFGEDEEDVSFSDLEEEDDNEGDVKVSYKNLTNSGSDSSDKKSPDWVQL 414          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2740 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
C6TED3_SOYBN1.199e-3650.96Putative uncharacterized protein OS=Glycine max PE... [more]
B9SH31_RICCO5.976e-2038.95Putative uncharacterized protein OS=Ricinus commun... [more]
B9IBL7_POPTR2.776e-1744.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TZ20_VITVI8.930e-1638.65Whole genome shotgun sequence of line PN40024, sca... [more]
Q9M2X8_ARATH4.869e-1330.07AT3g49800/T16K5_150 OS=Arabidopsis thaliana GN=T16... [more]
B9HFZ2_POPTR7.076e-1339.16Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of Pisum_sativum_v1_Contig2740 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G49800.12.959e-1530.07| Symbols: | BSD domain-containing protein | chr3... [more]
AT5G65910.11.761e-828.21| Symbols: | BSD domain-containing protein | chr5... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 28..41
score
NoneNo IPR availableSEGsegsegcoord: 109..115
score: NAcoord: 156..170
score: NAcoord: 189..199
score: NAcoord: 207..220
score
NoneNo IPR availableSEGsegsegcoord: 42..52
score
NoneNo IPR availableSEGsegsegcoord: 10..28
score
NoneNo IPR availableSEGsegsegcoord: 29..41
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2740 ID=Pisum_sativum_v1_Contig2740; Name=Pisum_sativum_v1_Contig2740; organism=Pisum sativum; type=contig; length=925bp
TACTGCACCCTAAACTCAGCAAAAATGATGCTGTTTTTTTATCAACTCCA
CAAATAATGGAAGCCAGAGCAATGTTAACTCAGGCATTAGACATAAGAAG
AAAGGAAAAGAAAGAACCAGACTTAATCAGCATTCCCTCAAAAGAGGAGG
AACAAGAACGGCATCTTTTCGTGCCAAGCAATGCTCAACTTGAATCAGTG
CCTCTTCAGACATCTGCGGTTGAAGAATCTCCATCTATGGCTGTGGCTAA
TTGTAGAGATCGGAGGGGCATACTGTTAAAAGTGATTCAACTCAACCTAT
TGACAAGCCTGTGGTTAAAGAAGCCCCGTCTATGGCTGTTGATAATGTAG
AGACCGAGGAGCATACCGTTAAAAGTGATGTAACTCAACCTATTGACGGG
CCTGTGGTTAAAGAAGCTCCATCTATGGTTGTGGATAATGTAGAGACCAA
TGAGCATGCTGTTAAAGGTGCTGTTATTCAACCAATCGACAATTCTGTTG
TTAAAGAAGCCCCAATTATTCCATCTGCAGAACAATCATCATCTGGTTCA
ACAAATCGGTTCTCATATGAAACATATGAGGATGATGCTGATGCCGATGA
TTGGCTGAAAGAGGATAGTTCTGAAATGGTTGGTCCCAGTGGAACTTCCA
TTCATACTGGTGGCGATGACGAGGATGTCTCATTCAGTGATCTTGAGGAG
GATGATGGTGATGTACATGCAAGTTATAAGAAAACATCAGGTTCTGATTC
TTCCACAAAAGACTCCAGAGATTGGGTTCAGTTAGGTAGAAGTTCACCTA
ACTCTGATAAGGATGTAAACTCTTTGGAACGCAGAAGCTCTGAGCTTTCC
AGTGCTCGTAATTCTATGACCAAGGATTCCAATGATTGNCTTAATGTTGA
CGACATTGATGTAATTTGATAATGC
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