Pisum_sativum_v1_Contig2772

Contig Overview


Name	Pisum_sativum_v1_Contig2772
Unique Name	Pisum_sativum_v1_Contig2772
Type	contig
Organism	Pisum sativum (pea)
Sequence length	289

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CD860933	EST	CD860933:1..176 +	Pisum sativum unigene v1	n/a
CD860921	EST	CD860921:1..176 +	Pisum sativum unigene v1	n/a
CD860783	EST	CD860783:22..176 +	Pisum sativum unigene v1	n/a
GH719137	EST	GH719137:15..289 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD860933	CD860933	Pisum sativum	EST
CD860921	CD860921	Pisum sativum	EST
CD860783	CD860783	Pisum sativum	EST
GH719137	GH719137	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.700e-19
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY
Sbjct:  136 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.700e-19
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY
Sbjct:  136 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.577e-16
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D +QV+KE+DEVVAAYP+AFVR+IGF+NVRQVQCISFIAHTPESY
Sbjct:   92 DPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTPESY 136

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.661e-13
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D+SQVLKEL +  A YP +F+RIIGFDNVRQVQCISFIAHTP++Y
Sbjct:  136 DSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTPKNY 180

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.834e-13
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKEL E   AYP AF+RIIGFDNVRQVQCISFIA+ P S+
Sbjct:  134 DASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.246e-13
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D+SQVLKEL+E   AYPQ+F+RIIGFDNVRQVQCISFIA+ P  +
Sbjct:  139 DSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.246e-13
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D+SQVLKEL+E   AYPQ+F+RIIGFDNVRQVQCISFIA+ P  +
Sbjct:  139 DSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.246e-13
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKEL E   AYP  F+RIIGFDNVRQVQCISFIA+ P S+
Sbjct:  134 DASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.246e-13
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DA+QVL E++E   AYPQA+VRIIGFDNVRQVQCISFIA+ PE Y
Sbjct:  136 DATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEGY 180

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.246e-13
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKEL E   AYP  F+RIIGFDNVRQVQCISFIA+ P S+
Sbjct:  134 DASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: Q9ZRI4_PEA (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Pisum sativum GN=RuBP PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.540e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY
Sbjct:   95 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 139

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: B7FMC2_MEDTR (Ribulose bisphosphate carboxylase small chain OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.450e-16
Identity = 42/45 (93.33%), Postives = 42/45 (93.33%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKELDEVV AYP AFVRIIGFDNVRQVQCISFIAHTPE Y
Sbjct:  137 DASQVLKELDEVVVAYPNAFVRIIGFDNVRQVQCISFIAHTPEVY 181

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: B7FHB2_MEDTR (Ribulose bisphosphate carboxylase small chain OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.006e-13
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D+SQVLKEL E  AAYP++F+RIIGFDNVRQVQCISFIAHTP +Y
Sbjct:  136 DSSQVLKELAEAKAAYPESFIRIIGFDNVRQVQCISFIAHTPATY 180

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: Q9ZP07_CICAR (Ribulose bisphosphate carboxylase small chain OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.925e-13
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            +A QVLKEL EVV AYP AFVRIIGFDNVRQVQCISFIAHTP+ +
Sbjct:  137 EAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPKEF 181

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: Q945R2_MEDSA (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.323e-12
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D+SQVLKEL +  A YP +F+RIIGFDNVRQVQCISFIAHTP++Y
Sbjct:   56 DSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTPKNY 100

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: B9T1N0_RICCO (Ribulose bisphosphate carboxylase small chain OS=Ricinus communis GN=RCOM_1158790 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.323e-12
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DA QVLKELDE + AYP +FVRIIGFDNVRQVQCISFIA+ P S+
Sbjct:  138 DAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPPSF 182

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: Q84Y16_CHRMO (Ribulose bisphosphate carboxylase small chain OS=Chrysanthemum morifolium PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.340e-12
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKEL+E    YPQ++VRIIGFDNVRQVQCISFIAH P+ Y
Sbjct:  135 DASQVLKELNECKKEYPQSWVRIIGFDNVRQVQCISFIAHKPDGY 179

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: Q42815_GLYSO (Ribulose bisphosphate carboxylase small chain OS=Glycine soja GN=rbcS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.649e-11
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DASQVLKEL E   AYP  F+RIIGFDNVRQVQCISFIA+ P S+
Sbjct:  134 DASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: Q9SAP7_TRIRP (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Trifolium repens PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.154e-11
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DA+QVLKE+ E  A YP+AF+RIIGFDNVRQVQCISFIA TP+ Y
Sbjct:   31 DAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKVY 75

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Match: Q6RWD8_CAPAN (Ribulose bisphosphate carboxylase small chain OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.813e-11
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            DA+QVL E+ E   AYPQA++RIIGFDNVRQVQCISFIA+ PE Y
Sbjct:  136 DATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY 180

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide
Match: AT1G67090.1 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180)

HSP 1 Score: 67.0106 bits (162), Expect = 2.724e-12
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  134 DSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide
Match: AT5G38410.3 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186)

HSP 1 Score: 66.2402 bits (160), Expect = 4.646e-12
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  139 DSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 183

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide
Match: AT5G38410.2 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=174)

HSP 1 Score: 66.2402 bits (160), Expect = 4.646e-12
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  127 DSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 171

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide
Match: AT5G38410.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181)

HSP 1 Score: 66.2402 bits (160), Expect = 4.646e-12
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  134 DSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide
Match: AT5G38420.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15381203-15381978 REVERSE LENGTH=181)

HSP 1 Score: 66.2402 bits (160), Expect = 4.646e-12
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  134 DSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide
Match: AT5G38430.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181)

HSP 1 Score: 66.2402 bits (160), Expect = 4.646e-12
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1

Query:    1 DASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 135
            D++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  134 DSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2772 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RBS3_PEA	7.700e-19	100.00	Ribulose bisphosphate carboxylase small chain 3A, ...	[more]
RBS2_PEA	7.700e-19	100.00	Ribulose bisphosphate carboxylase small chain 3C, ...	[more]
RBS1_PEA	3.577e-16	84.44	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_MEDSA	1.661e-13	75.56	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_GLYTA	2.834e-13	77.78	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_PYRPY	8.246e-13	73.33	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_MALSP	8.246e-13	73.33	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_GLYTO	8.246e-13	75.56	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS8_NICPL	8.246e-13	75.56	Ribulose bisphosphate carboxylase small chain 8B, ...	[more]
RBS4_SOYBN	8.246e-13	75.56	Ribulose bisphosphate carboxylase small chain 4, c...	[more]

BLAST of Pisum_sativum_v1_Contig2772 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9ZRI4_PEA	1.540e-17	100.00	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
B7FMC2_MEDTR	8.450e-16	93.33	Ribulose bisphosphate carboxylase small chain OS=M...	[more]
B7FHB2_MEDTR	3.006e-13	80.00	Ribulose bisphosphate carboxylase small chain OS=M...	[more]
Q9ZP07_CICAR	3.925e-13	82.22	Ribulose bisphosphate carboxylase small chain OS=C...	[more]
Q945R2_MEDSA	3.323e-12	75.56	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
B9T1N0_RICCO	3.323e-12	77.78	Ribulose bisphosphate carboxylase small chain OS=R...	[more]
Q84Y16_CHRMO	4.340e-12	77.78	Ribulose bisphosphate carboxylase small chain OS=C...	[more]
Q42815_GLYSO	1.649e-11	75.56	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
Q9SAP7_TRIRP	2.154e-11	75.56	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
Q6RWD8_CAPAN	2.813e-11	73.33	Ribulose bisphosphate carboxylase small chain OS=C...	[more]

BLAST of Pisum_sativum_v1_Contig2772 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT1G67090.1	2.724e-12	66.67	\| Symbols: RBCS1A \| ribulose bisphosphate carboxyl...	[more]
AT5G38410.3	4.646e-12	66.67	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.2	4.646e-12	66.67	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.1	4.646e-12	66.67	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38420.1	4.646e-12	66.67	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38430.1	4.646e-12	66.67	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 3..26 score
None	No IPR available	SEG	seg	seg	coord: 6..17 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2772 ID=Pisum_sativum_v1_Contig2772; Name=Pisum_sativum_v1_Contig2772; organism=Pisum sativum; type=contig; length=289bp
GATGCTTCTCAAGTCTTGAAGGAGCTTGATGAAGTTGTTGCCGCTTACCC
TCAAGCTTTCGTTCGTATCATCGGTTTCGACAACGTTCGTCAAGTTCAAT
GCATCAGTTTCATTGCACACACACCAGAATCCTACTAAGTTTGAGTATTA
TGGCATTGGAAAAGCTGTTTCTCTTGTACCATTTGTTGTGCTTGTAATTT
ACTGTGTTTTTTTTTCGGTTTTTGGTTTCGGACTGTAAAATGGAAATGGA
TGGAGAAGAGTTAATGAATGATATGGTCCTTTTGTTCAT

Search form

Pisum_sativum_v1_Contig2772