Pisum_sativum_v1_Contig2774

Contig Overview
NamePisum_sativum_v1_Contig2774
Unique NamePisum_sativum_v1_Contig2774
Typecontig
OrganismPisum sativum (pea)
Sequence length485
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD860925ESTCD860925:1..271 -Pisum sativum unigene v1n/a
EX569812ESTEX569812:55..485 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860925CD860925Pisum sativumEST
EX569812EX569812Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: Q9S7N8_SOYBN (Putative uncharacterized protein OS=Glycine max GN=PM21 PE=4 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.515e-23
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = -2 
Query:  143 KDSTEGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSGANVSSEAQFKAADAVNREGVP 364
            + STEG+P  +DSPY+KY +LEDYK+QGYGTQGHQ+P  GRGAG+TEAPTLSGA VSS+AQ  A DA+N +GVP
Sbjct:   23 ESSTEGLPM-EDSPYVKYKDLEDYKRQGYGTQGHQEPKTGRGAGATEAPTLSGAAVSSDAQVAATDAINSKGVP 95
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: Q9LL46_PHAVU (LEA-18 OS=Phaseolus vulgaris PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.831e-19
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = -2 
Query:  152 NEPGKDSTEGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSGANVSSEAQFKAADAVNRE 376
            +E GK + EG+P  +DSPY+KY +LEDYK+QGYGTQGHQ+P  GRGAG+TEAPTLSGA  SS++Q  A  A N +
Sbjct:    9 SEQGKVNLEGLP-TEDSPYVKYKDLEDYKQQGYGTQGHQEPKTGRGAGATEAPTLSGAAFSSKSQATATGATNHK 82
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: O24439_PHAVU (PvLEA-18 OS=Phaseolus vulgaris GN=Pvlea-18 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.406e-18
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = -2 
Query:  152 NEPGKDSTEGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSGANVSSEAQFKAADAVNRE 376
            +E GK + EG+P  +DSPY+KY +LEDYK+QGYGTQGHQ+P  GRGAG+TEAPTLSGA  SS++Q     A N +
Sbjct:   13 SEQGKVNLEGLP-TEDSPYVKYKDLEDYKQQGYGTQGHQEPKTGRGAGATEAPTLSGAAFSSKSQATGTGATNHK 86
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: B9T4J9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0396800 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.718e-16
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  143 KDSTEGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSGANVSSEAQFKAADAVNREGVP 364
            K+S + +   KDSPYL+Y +LEDYKK+GYGT+GH QP  GRGAG+T+APTLSG +V  EA     DA+  +  P
Sbjct:   23 KESVDQILPIKDSPYLQYKDLEDYKKKGYGTEGHLQPKPGRGAGATDAPTLSGGSVPREADVSTIDAITSKPTP 96
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: A5BE80_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032080 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.241e-15
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = -2 
Query:  143 EGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSGANVSSEAQFKAADAVNREGVP 352
            EG+P  + SPY +  +LEDYK++GYGT+GH QP  GRG+ ST+APT+SGA+VSS ++  A DA NR GVP
Sbjct:   22 EGLPM-ETSPYTQXSDLEDYKRKGYGTEGHLQPKPGRGS-STDAPTISGASVSSRSELSATDAKNRHGVP 89
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: O64820_ARATH (At2g23110 OS=Arabidopsis thaliana GN=At2g23110/F21P24.17 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.757e-13
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = -2 
Query:  143 SPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSG----ANVSSEAQFKAADAVNREGVP 328
            +PYL YDNLEDYK +GYG QGHQ+P  G G G+T+APT SG       ++     + DA+NR+GVP
Sbjct:   27 TPYLDYDNLEDYKMKGYGAQGHQEPKLGMGGGATDAPTPSGGLGRGGGAASTDLSSTDAINRQGVP 92
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: D7LEP0_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_667549 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.471e-12
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = -2 
Query:  143 SPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSG----ANVSSEAQFKAADAVNREGVP 328
            SPYL YDNLEDYK +GYG  GHQ+P  G G G+T+APT SG       ++     +  A+NR+GVP
Sbjct:   27 SPYLDYDNLEDYKMKGYGAHGHQEPKLGMGGGATDAPTPSGGLGRGGGAASTDLSSTGAINRQGVP 92
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: B9H6M0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_208842 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.664e-11
Identity = 35/63 (55.56%), Postives = 49/63 (77.78%), Query Frame = -2 
Query:  191 NEPGKDSTEGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAG-STEAPTLSGANVSS 376
            +E  K ++EG+P  +DSPY+ Y +LEDYK++ YGT+GH +P  GRGAG ST+APT+SG  +SS
Sbjct:   12 HEDKKVNSEGLPV-EDSPYVNYGDLEDYKRKAYGTEGHLEPKTGRGAGASTDAPTISGGALSS 73
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: D7LGC8_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482317 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.193e-9
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = -2 
Query:  152 KDSTEGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSGANVSSEAQFKAADAVNRE 364
            ++  E +P  + SPY KY+++EDYKK  YGT GHQ    G+G G+T+APTLSG+   S     A D+ N++
Sbjct:    5 REEKEELPL-ETSPYTKYEDIEDYKKNAYGTSGHQDVKPGQGGGTTDAPTLSGSGAPS-----AIDSANQK 69
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Match: B9RX69_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0818500 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.938e-8
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = -2 
Query:  206 NEPGKDSTEGVPFNKDSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSG 376
            NE  K+    +P  K SPY++Y+ LEDYK+QGYG +GH+     +G G T+APT+SG
Sbjct:   14 NEGNKEVEVRLPV-KTSPYVQYNTLEDYKRQGYGAEGHKPVKPNQGGGGTDAPTVSG 69
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TAIR peptide
Match: AT2G23110.2 (| Symbols: | Late embryogenesis abundant protein, group 6 | chr2:9840552-9840830 FORWARD LENGTH=92)

HSP 1 Score: 77.0258 bits (188), Expect = 5.595e-15
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = -2 
Query:  143 SPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSG----ANVSSEAQFKAADAVNREGVP 328
            +PYL YDNLEDYK +GYG QGHQ+P  G G G+T+APT SG       ++     + DA+NR+GVP
Sbjct:   27 TPYLDYDNLEDYKMKGYGAQGHQEPKLGMGGGATDAPTPSGGLGRGGGAASTDLSSTDAINRQGVP 92
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TAIR peptide
Match: AT2G23110.1 (| Symbols: | Late embryogenesis abundant protein, group 6 | chr2:9840552-9840830 FORWARD LENGTH=92)

HSP 1 Score: 77.0258 bits (188), Expect = 5.595e-15
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = -2 
Query:  143 SPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSG----ANVSSEAQFKAADAVNREGVP 328
            +PYL YDNLEDYK +GYG QGHQ+P  G G G+T+APT SG       ++     + DA+NR+GVP
Sbjct:   27 TPYLDYDNLEDYKMKGYGAQGHQEPKLGMGGGATDAPTPSGGLGRGGGAASTDLSSTDAINRQGVP 92
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TAIR peptide
Match: AT2G33690.1 (| Symbols: | Late embryogenesis abundant protein, group 6 | chr2:14252199-14252414 FORWARD LENGTH=71)

HSP 1 Score: 61.2326 bits (147), Expect = 3.177e-10
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = -2 
Query:  152 SPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSGANVSSEAQFKAADAVNRE 328
            SPY KY+++EDYKK  YGT GHQ    G G G+T+APT SG     +A   A D+ N++
Sbjct:   15 SPYTKYEDIEDYKKNAYGTSGHQDVKPGHGGGTTDAPTPSG-----DAAPSAIDSANQK 68
[Close]
BLAST of Pisum_sativum_v1_Contig2774 vs. TAIR peptide
Match: AT2G23120.1 (| Symbols: | Late embryogenesis abundant protein, group 6 | chr2:9842102-9842353 FORWARD LENGTH=83)

HSP 1 Score: 60.4622 bits (145), Expect = 5.419e-10
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = -2 
Query:  206 DSPYLKYDNLEDYKKQGYGTQGHQQPTEGRGAGSTEAPTLSG 331
            DSPY+    LEDYK + YG +GHQ+PT G G GST+APT SG
Sbjct:   29 DSPYMATGTLEDYKLKAYGAEGHQEPTPGLGGGSTDAPTPSG 70
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2774 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9S7N8_SOYBN5.515e-2370.27Putative uncharacterized protein OS=Glycine max GN... [more]
Q9LL46_PHAVU4.831e-1962.67LEA-18 OS=Phaseolus vulgaris PE=4 SV=1[more]
O24439_PHAVU1.406e-1861.33PvLEA-18 OS=Phaseolus vulgaris GN=Pvlea-18 PE=4 SV... [more]
B9T4J9_RICCO1.718e-1655.41Putative uncharacterized protein OS=Ricinus commun... [more]
A5BE80_VITVI3.241e-1558.57Putative uncharacterized protein OS=Vitis vinifera... [more]
O64820_ARATH6.757e-1353.03At2g23110 OS=Arabidopsis thaliana GN=At2g23110/F21... [more]
D7LEP0_ARALY7.471e-1251.52Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
B9H6M0_POPTR1.664e-1155.56Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7LGC8_ARALY1.193e-945.07Putative uncharacterized protein (Fragment) OS=Ara... [more]
B9RX69_RICCO2.938e-849.12Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of Pisum_sativum_v1_Contig2774 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G23110.25.595e-1553.03| Symbols: | Late embryogenesis abundant protein,... [more]
AT2G23110.15.595e-1553.03| Symbols: | Late embryogenesis abundant protein,... [more]
AT2G33690.13.177e-1049.15| Symbols: | Late embryogenesis abundant protein,... [more]
AT2G23120.15.419e-1061.90| Symbols: | Late embryogenesis abundant protein,... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..31
score
NoneNo IPR availableSEGsegsegcoord: 37..47
score
NoneNo IPR availableSEGsegsegcoord: 16..30
score
IPR018930Late embryogenesis abundant protein, group 6PFAMPF10714LEA_6coord: 30..108
score: 1.9

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2774 ID=Pisum_sativum_v1_Contig2774; Name=Pisum_sativum_v1_Contig2774; organism=Pisum sativum; type=contig; length=485bp
GGTAAACCCAGATCCAATAAGAACCTAAACGAAAACATAAAAATTACAAC
AATCTAAAACCTCACAAAGACAACTTCACAAACTTAAAACACAATATCTT
ATTAAAACACAAATTAAGAAACCCTAGACAGAACATAAACTAAGGAACTC
CTTCTCGATTAACAGCATCAGCAGCTTTGAACTGAGCCTCAGATGAAACA
TTAGCACCAGAGAGAGTTGGTGCTTCTGTAGAACCAGCTCCACGACCTTC
CGTAGGTTGCTGGTGACCTTGTGTACCGTAACCTTGTTTCTTATAATCCT
CTAAGTTATCGTATTTCAGATAAGGACTGTCCTTATTAAATGGAACCCCT
TCAGTGCTGTCTTTACCTGGTTCGTTTTCGGTTGTTGGCTTTGTTTCCTT
CTCAGTTTGTTTCTCCATCTTGATGATCCTATGTTGTCTTTGTGAGGTTT
TAGATTGTTGTAATTTTTATGTTTTCGTTTAGGTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR018930LEA-18