Pisum_sativum_v1_Contig2781

Contig Overview


Name	Pisum_sativum_v1_Contig2781
Unique Name	Pisum_sativum_v1_Contig2781
Type	contig
Organism	Pisum sativum (pea)
Sequence length	778

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CD860849	EST	CD860849:1..676 +	Pisum sativum unigene v1	n/a
FG529664	EST	FG529664:281..778 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD860849	CD860849	Pisum sativum	EST
FG529664	FG529664	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP_PEA (Malate dehydrogenase [NADP], chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.354e-63
Identity = 118/129 (91.47%), Postives = 118/129 (91.47%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FTEKVQKRGGVLIQKWGR           DAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM
Sbjct:  313 FTEKVQKRGGVLIQKWGRSSAASTSVSIVDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 441

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BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP_MEDSA (Malate dehydrogenase [NADP], chloroplastic OS=Medicago sativa GN=MDH1 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.073e-60
Identity = 113/129 (87.60%), Postives = 114/129 (88.37%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FTEKVQKRGG LIQKWGR           DAIRSLI PTPEGDWFS+GVYT GNPYGIAEDIVFSMPCRSKGDGDYELV DVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM
Sbjct:  309 FTEKVQKRGGALIQKWGRSSAASTSVSIVDAIRSLIIPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELVKDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 437

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP_FLABI (Malate dehydrogenase [NADP], chloroplastic OS=Flaveria bidentis PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.772e-55
Identity = 103/129 (79.84%), Postives = 109/129 (84.50%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FT  VQ RGGVLI+KWGR           DAIRSL+TPTPEGDWFS+GVYTNGNPYGIAEDIVFSMPCRSKGDGDYE V DVIFDDYL +K+ K+E ELLAEKKCVAHLTGEGIAVCDLP DTMLPGEM
Sbjct:  325 FTNMVQTRGGVLIKKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTNGNPYGIAEDIVFSMPCRSKGDGDYEFVKDVIFDDYLSKKIKKSEDELLAEKKCVAHLTGEGIAVCDLPEDTMLPGEM 453

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP_MESCR (Malate dehydrogenase [NADP], chloroplastic OS=Mesembryanthemum crystallinum GN=MDH1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.796e-55
Identity = 100/130 (76.92%), Postives = 110/130 (84.62%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLP-GDTMLPGEM 388
            FT  +QKRGG LIQKWGR           DAI+SL+TPTPEGDWFSS VYTNGNPYGIAED+VFSMPCRSKGDGDYELV DV+FDDYLRQ++ K+E ELLAEK+C AHLTGEG+AVCDLP GDTMLPGEM
Sbjct:  312 FTVMIQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSSAVYTNGNPYGIAEDLVFSMPCRSKGDGDYELVKDVVFDDYLRQRIKKSEEELLAEKRCTAHLTGEGVAVCDLPAGDTMLPGEM 441

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP_SPIOL (Malate dehydrogenase [NADP], chloroplastic OS=Spinacia oleracea GN=MDH PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.725e-54
Identity = 100/130 (76.92%), Postives = 109/130 (83.85%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLP-GDTMLPGEM 388
            FTEKV+KRGGVLIQKWGR           DAI  LITPTP GDWF SGVYTNGNPYGIAED+++SMPCRSKGDGDYELV DVIFDDYLR+++  +E ELLAEK+C AHLTGEGIAVCDLP GDTMLPGEM
Sbjct:  306 FTEKVRKRGGVLIQKWGRSSAASTAVSIVDAINPLITPTPPGDWFPSGVYTNGNPYGIAEDLIYSMPCRSKGDGDYELVKDVIFDDYLRKRIKTSEEELLAEKRCTAHLTGEGIAVCDLPAGDTMLPGEM 435

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP_MAIZE (Malate dehydrogenase [NADP], chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.075e-52
Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FT  VQKRGGVLIQKWGR           DAIRSL+TPTPEGDWFS+GVYT GNPYGIAEDIVFSMPCRSKGDGDYEL +DV+ DD+L +++ K+EAELLAEKKCVAHLTGEG A CDLP DTMLPGE+
Sbjct:  304 FTLTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELASDVLMDDFLWERIKKSEAELLAEKKCVAHLTGEGNAFCDLPEDTMLPGEV 432

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP2_SORBI (Malate dehydrogenase [NADP] 2, chloroplastic OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.648e-51
Identity = 96/128 (75.00%), Postives = 105/128 (82.03%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGE 385
            FT  VQKRGGVLIQKWGR           DAI+SL+TPTPEG+WFS+GVYT GNPYGIAEDIVFSMPCRSKGDGDYEL  DV  DD+L +++ K+EAELLAEKKCVAHLTGEG A CDLP DTMLPGE
Sbjct:  304 FTMTVQKRGGVLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGEWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSMDDFLWERIKKSEAELLAEKKCVAHLTGEGDAFCDLPEDTMLPGE 431

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDHP1_SORBI (Malate dehydrogenase [NADP] 1, chloroplastic OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.900e-51
Identity = 95/129 (73.64%), Postives = 105/129 (81.40%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FT  VQKRGG LIQKWGR           DAI+SL+TPTPEGDWFS+GVYT GNPYGIAEDIVFSMPCRSKGDGDYEL  DV  DD+L +++ K+EAELLAEKKCVAHLTGEG A CD+P DTMLPGE+
Sbjct:  301 FTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSMDDFLWERIKKSEAELLAEKKCVAHLTGEGNAYCDVPEDTMLPGEV 429

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDH_PARUW (Malate dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=mdh PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.047e-19
Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHL 328
            F E VQKRG  +IQ  G+           DA+R  I PTP G WFS+ + ++GNPYGI E ++FS PCR K +G+  +V+ + +D +L +K+  TE EL  E++ V+ +
Sbjct:  219 FIESVQKRGAAIIQARGKSSAASAASALLDAMRDRILPTPTGQWFSTALLSDGNPYGIEEGLIFSFPCRVKKNGELSIVSGLKWDAFLEEKIKLTEQELKEEREMVSSI 327

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BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Match: MDH_CHLMU (Malate dehydrogenase OS=Chlamydia muridarum GN=mdh PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.051e-15
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 2

Query:   14 VQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVA 322
            VQ RG  +I+  G+           +A RS+  P  EG+WFSSGV ++ NPYG+ EDI+F  PCR  G G+YE+V  + +D ++R K+  +  E+L EK  V+
Sbjct:  224 VQSRGSAVIEARGKSSAASAARALAEAARSIYQPK-EGEWFSSGVCSDNNPYGLPEDIIFGFPCRMLGTGEYEIVPGLPWDAFIRGKMQISLDEILQEKASVS 325

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BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: Q5NE17_SOLLC (Malate dehydrogenase OS=Solanum lycopersicum GN=mdh PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.910e-56
Identity = 105/129 (81.40%), Postives = 113/129 (87.60%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FTEKVQKRGGVLIQKWGR           DAIRSL+TPTPEGDWFS+GVYTNGNPYGIA+DIVFSMPCRSKGDGDYELV +VIFDDYL  ++ K+E ELLAEK+CVAHLTGEGIAVCDLPGDTMLPGEM
Sbjct:  314 FTEKVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTNGNPYGIAQDIVFSMPCRSKGDGDYELVKEVIFDDYLWNRIKKSEDELLAEKRCVAHLTGEGIAVCDLPGDTMLPGEM 442

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: B9T307_RICCO (Malate dehydrogenase, putative OS=Ricinus communis GN=RCOM_0351140 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.965e-56
Identity = 104/129 (80.62%), Postives = 112/129 (86.82%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FTEKVQKRGGVLI+KWGR           DAI+SL+TPTPEGDWFSSGVYTNGNPYGIAED+VFSMPCRS GDGDYELV DVIFDDYL +K+ KTEAELLAEK+CVAHLTGEG+A CDLP DTMLPGEM
Sbjct:  305 FTEKVQKRGGVLIKKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSSGVYTNGNPYGIAEDLVFSMPCRSNGDGDYELVKDVIFDDYLLKKITKTEAELLAEKRCVAHLTGEGVAYCDLPEDTMLPGEM 433

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: Q645M8_SOLLC (Chloroplast malate dehydrogenase OS=Solanum lycopersicum GN=chMDH PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.444e-55
Identity = 101/129 (78.29%), Postives = 112/129 (86.82%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FTEK+QKRGGVLIQKWGR           DA+RSL+TPTPEGDWFS+GVYTNGNPYGIA+DIVFSMPCRSKGDGDYELV DV+ DDYLR ++ K+E ELLAEK+CVAHLTGEGI +CDLPGDTMLPGEM
Sbjct:  302 FTEKIQKRGGVLIQKWGRSSAASTAVSVVDAMRSLVTPTPEGDWFSTGVYTNGNPYGIAKDIVFSMPCRSKGDGDYELVKDVLMDDYLRSRIKKSEDELLAEKRCVAHLTGEGIGICDLPGDTMLPGEM 430

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: D7TM20_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016172001 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.223e-54
Identity = 102/129 (79.07%), Postives = 111/129 (86.05%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FTEKVQKRGGVLIQKWGR           DA++SL+TPTPEGDWFSSGVYT GNPYG+AE IVFSMPCRSKGDGDYELV DVIFD+YL +++ KTEAELLAEK+CVAHLTGEGIA CDLP DTMLPGEM
Sbjct:  309 FTEKVQKRGGVLIQKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTTGNPYGVAEGIVFSMPCRSKGDGDYELVKDVIFDEYLLKRITKTEAELLAEKRCVAHLTGEGIAFCDLPEDTMLPGEM 437

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: B9HL67_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820232 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.223e-54
Identity = 101/129 (78.29%), Postives = 113/129 (87.60%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FTEKVQKRGGVLIQKWGR           DA++SL+TPTPEGDWFSSGVYT+GNPYGIA+DIVFSMPCRSKGDGDYELV DV FD+YL +++AK+EAELLAEK+CVAHLTGEG+A CDLP DTMLPGEM
Sbjct:  314 FTEKVQKRGGVLIQKWGRSSAASTAVSIADAMKSLVTPTPEGDWFSSGVYTSGNPYGIAQDIVFSMPCRSKGDGDYELVKDVTFDEYLLKRIAKSEAELLAEKRCVAHLTGEGVAFCDLPEDTMLPGEM 442

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: Q42737_FLATR (NADP-malate dehydrogenase OS=Flaveria trinervia PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.724e-54
Identity = 103/129 (79.84%), Postives = 109/129 (84.50%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FT  VQ RGGVLI+KWGR           DAIRSL+TPTPEGDWFS+GVYTNGNPYGIAEDIVFSMPCRSKGDGDYE V DVIFDDYL +K+ K+E ELLAEKKCVAHLTGEGIAVCDLP DTMLPGEM
Sbjct:  288 FTNMVQTRGGVLIKKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSTGVYTNGNPYGIAEDIVFSMPCRSKGDGDYEFVKDVIFDDYLSKKIKKSEDELLAEKKCVAHLTGEGIAVCDLPEDTMLPGEM 416

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: Q1RS11_PASGE (Malate dehydrogenase (Fragment) OS=Paspalidium geminatum GN=nadp-MDH PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.710e-53
Identity = 101/129 (78.29%), Postives = 109/129 (84.50%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FT  VQKRGGVLIQKWGR           DAIRSL+TPTPEGDWFSSGVYT GNPYGIAEDIVFSMPCRSKGDGDYELV+DV+ DD+L +++ K+EAELLAEKKCVAHLTGEG A CDLP DTMLPGEM
Sbjct:  232 FTMTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSSGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELVSDVLMDDFLWERIKKSEAELLAEKKCVAHLTGEGNAFCDLPEDTMLPGEM 360

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: Q6YYW3_ORYSJ (Os08g0562100 protein OS=Oryza sativa subsp. japonica GN=P0604E01.47 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.952e-52
Identity = 99/129 (76.74%), Postives = 108/129 (83.72%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FT+ VQKRGGVLIQKWGR           DAIRSL+ PTPEGDWFS+GVYT GNPYGIAEDIVFSMPCRSKGDGDYELV DV  DD+L +++ K+EAELLAEK+CVAHLTGEG A CDLPGDTMLPGEM
Sbjct:  305 FTKTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVNPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELVKDVAMDDFLWERIKKSEAELLAEKRCVAHLTGEGNAFCDLPGDTMLPGEM 433

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: B8B9L3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30287 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.952e-52
Identity = 99/129 (76.74%), Postives = 108/129 (83.72%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            FT+ VQKRGGVLIQKWGR           DAIRSL+ PTPEGDWFS+GVYT GNPYGIAEDIVFSMPCRSKGDGDYELV DV  DD+L +++ K+EAELLAEK+CVAHLTGEG A CDLPGDTMLPGEM
Sbjct:  305 FTKTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVNPTPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELVKDVAMDDFLWERIKKSEAELLAEKRCVAHLTGEGNAFCDLPGDTMLPGEM 433

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Match: A5BPU3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021989 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.265e-51
Identity = 97/127 (76.38%), Postives = 107/127 (84.25%), Query Frame = 2

Query:    8 EKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDLPGDTMLPGEM 388
            E  +KRGGVLIQKWGR           DA++SL+TPTPEGDWFSSGVYT GNPYG+AE IVFSMPCRSKGDGDYELV DVIFD+YL +++ KTEAELLAEK+CVAHLTGEGIA CDLP DTMLPGEM
Sbjct:  308 EFTEKRGGVLIQKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTTGNPYGVAEGIVFSMPCRSKGDGDYELVKDVIFDEYLLKRITKTEAELLAEKRCVAHLTGEGIAFCDLPEDTMLPGEM 434

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide
Match: AT5G58330.1 (| Symbols: | lactate/malate dehydrogenase family protein | chr5:23580010-23582287 REVERSE LENGTH=443)

HSP 1 Score: 206.453 bits (524), Expect = 1.400e-53
Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDL-PGDTMLPGEM 388
            FTE VQKRGG+LIQKWGR           DAI+SL+TPTPEGDWFS+GVYT+GNPYGI E +VFSMPCRSKGDGDYELV DV  DDYLRQ++AK+EAELLAEK+CVAHLTGEGIA CDL P DTMLPGE+
Sbjct:  314 FTESVQKRGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELVKDVEIDDYLRQRIAKSEAELLAEKRCVAHLTGEGIAYCDLGPVDTMLPGEV 443

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide
Match: AT5G58330.2 (| Symbols: | lactate/malate dehydrogenase family protein | chr5:23580010-23582287 REVERSE LENGTH=442)

HSP 1 Score: 206.453 bits (524), Expect = 1.400e-53
Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDL-PGDTMLPGEM 388
            FTE VQKRGG+LIQKWGR           DAI+SL+TPTPEGDWFS+GVYT+GNPYGI E +VFSMPCRSKGDGDYELV DV  DDYLRQ++AK+EAELLAEK+CVAHLTGEGIA CDL P DTMLPGE+
Sbjct:  313 FTESVQKRGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELVKDVEIDDYLRQRIAKSEAELLAEKRCVAHLTGEGIAYCDLGPVDTMLPGEV 442

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide
Match: AT5G58330.3 (| Symbols: | lactate/malate dehydrogenase family protein | chr5:23580010-23581751 REVERSE LENGTH=334)

HSP 1 Score: 206.453 bits (524), Expect = 1.400e-53
Identity = 99/130 (76.15%), Postives = 110/130 (84.62%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEKKCVAHLTGEGIAVCDL-PGDTMLPGEM 388
            FTE VQKRGG+LIQKWGR           DAI+SL+TPTPEGDWFS+GVYT+GNPYGI E +VFSMPCRSKGDGDYELV DV  DDYLRQ++AK+EAELLAEK+CVAHLTGEGIA CDL P DTMLPGE+
Sbjct:  205 FTESVQKRGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELVKDVEIDDYLRQRIAKSEAELLAEKRCVAHLTGEGIAYCDLGPVDTMLPGEV 334

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide
Match: AT1G04410.1 (| Symbols: | Lactate/malate dehydrogenase family protein | chr1:1189418-1191267 REVERSE LENGTH=332)

HSP 1 Score: 53.9138 bits (128), Expect = 1.161e-7
Identity = 34/105 (32.38%), Postives = 53/105 (50.48%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMP--CRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEK 310
            F   VQ+RG  +I+               D IR  +  TPEG + S GVY++G+ Y +   +++S P  CR   +GD+ +V  +  D+  R+K+  T  EL  EK
Sbjct:  224 FISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGS-YSVPSGLIYSFPVTCR---NGDWSIVQGLPIDEVSRKKMDLTAEELKEEK 324

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide
Match: AT5G43330.1 (| Symbols: | Lactate/malate dehydrogenase family protein | chr5:17390552-17392449 FORWARD LENGTH=332)

HSP 1 Score: 53.1434 bits (126), Expect = 1.981e-7
Identity = 34/105 (32.38%), Postives = 53/105 (50.48%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMP--CRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEK 310
            F   VQ+RG  +I+               D IR  +  TPEG + S GVY++G+ Y +   +++S P  CR   +G++ +V  +  DD  R+K+  T  EL  EK
Sbjct:  224 FISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGS-YNVPAGLIYSFPVTCR---NGEWTIVQGLPIDDASRKKMDLTAEELKEEK 324

[Close]

BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide
Match: AT5G56720.1 (| Symbols: | Lactate/malate dehydrogenase family protein | chr5:22945537-22946718 FORWARD LENGTH=339)

HSP 1 Score: 51.9878 bits (123), Expect = 4.413e-7
Identity = 31/103 (30.10%), Postives = 53/103 (51.46%), Query Frame = 2

Query:    2 FTEKVQKRGGVLIQKWGRXXXXXXXXXXXDAIRSLITPTPEGDWFSSGVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVNDVIFDDYLRQKLAKTEAELLAEK 310
            F  +VQ+RG  +++   +           D IR     TP+G W S GV ++G+ YGI   +V+S P   +  G +++V  +  D++ R+K+  +  EL  EK
Sbjct:  230 FIVEVQQRGAAVLRARKQSSAFSAAGAACDHIRDWFLGTPKGTWVSMGVCSDGS-YGIPPGLVYSFPVICE-KGSWKIVQGLSIDEFSREKMDDSARELAEEK 330

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2781 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
MDHP_PEA	1.354e-63	91.47	Malate dehydrogenase [NADP], chloroplastic OS=Pisu...	[more]
MDHP_MEDSA	1.073e-60	87.60	Malate dehydrogenase [NADP], chloroplastic OS=Medi...	[more]
MDHP_FLABI	1.772e-55	79.84	Malate dehydrogenase [NADP], chloroplastic OS=Flav...	[more]
MDHP_MESCR	8.796e-55	76.92	Malate dehydrogenase [NADP], chloroplastic OS=Mese...	[more]
MDHP_SPIOL	9.725e-54	76.92	Malate dehydrogenase [NADP], chloroplastic OS=Spin...	[more]
MDHP_MAIZE	1.075e-52	75.97	Malate dehydrogenase [NADP], chloroplastic OS=Zea ...	[more]
MDHP2_SORBI	2.648e-51	75.00	Malate dehydrogenase [NADP] 2, chloroplastic OS=So...	[more]
MDHP1_SORBI	5.900e-51	73.64	Malate dehydrogenase [NADP] 1, chloroplastic OS=So...	[more]
MDH_PARUW	2.047e-19	41.28	Malate dehydrogenase OS=Protochlamydia amoebophila...	[more]
MDH_CHLMU	1.051e-15	40.78	Malate dehydrogenase OS=Chlamydia muridarum GN=mdh...	[more]

BLAST of Pisum_sativum_v1_Contig2781 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q5NE17_SOLLC	2.910e-56	81.40	Malate dehydrogenase OS=Solanum lycopersicum GN=md...	[more]
B9T307_RICCO	4.965e-56	80.62	Malate dehydrogenase, putative OS=Ricinus communis...	[more]
Q645M8_SOLLC	1.444e-55	78.29	Chloroplast malate dehydrogenase OS=Solanum lycope...	[more]
D7TM20_VITVI	1.223e-54	79.07	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HL67_POPTR	1.223e-54	78.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q42737_FLATR	2.724e-54	79.84	NADP-malate dehydrogenase OS=Flaveria trinervia PE...	[more]
Q1RS11_PASGE	6.710e-53	78.29	Malate dehydrogenase (Fragment) OS=Paspalidium gem...	[more]
Q6YYW3_ORYSJ	1.952e-52	76.74	Os08g0562100 protein OS=Oryza sativa subsp. japoni...	[more]
B8B9L3_ORYSI	1.952e-52	76.74	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A5BPU3_VITVI	1.265e-51	76.38	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of Pisum_sativum_v1_Contig2781 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT5G58330.1	1.400e-53	76.15	\| Symbols: \| lactate/malate dehydrogenase family ...	[more]
AT5G58330.2	1.400e-53	76.15	\| Symbols: \| lactate/malate dehydrogenase family ...	[more]
AT5G58330.3	1.400e-53	76.15	\| Symbols: \| lactate/malate dehydrogenase family ...	[more]
AT1G04410.1	1.161e-7	32.38	\| Symbols: \| Lactate/malate dehydrogenase family ...	[more]
AT5G43330.1	1.981e-7	32.38	\| Symbols: \| Lactate/malate dehydrogenase family ...	[more]
AT5G56720.1	4.413e-7	30.10	\| Symbols: \| Lactate/malate dehydrogenase family ...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010945	Malate dehydrogenase, NAD/NADP	PANTHER	PTHR23382	MALATE DEHYDROGENASE	coord: 1..110 score: 3.3
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	GENE3D	3.90.110.10	no description	coord: 1..111 score: 2.2
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	SUPERFAMILY	56327	LDH C-terminal domain-like	coord: 1..113 score: 2.3
IPR022383	Lactate/malate dehydrogenase, C-terminal	PFAM	PF02866	Ldh_1_C	coord: 1..108 score: 3.3
None	No IPR available	SEG	seg	seg	coord: 19..29 score
None	No IPR available	SEG	seg	seg	coord: 38..52 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2781 ID=Pisum_sativum_v1_Contig2781; Name=Pisum_sativum_v1_Contig2781; organism=Pisum sativum; type=contig; length=778bp
GTTCACTGAAAAGGTTCAAAAGAGAGGTGGCGTGCTTATTCAAAAATGGG
GAAGATCATCTGCTGCATCAACTTCAGTGTCGACAGTTGATGCCATACGA
TCTTTGATCACTCCTACTCCCGAGGGTGACTGGTTTTCTTCTGGTGTATA
TACCAACGGAAATCCTTACGGAATAGCTGAAGATATCGTGTTCAGCATGC
CATGTAGATCAAAGGGAGATGGTGATTACGAGCTTGTCAATGATGTTATA
TTTGATGACTACCTAAGACAGAAATTAGCCAAAACAGAAGCTGAGTTATT
GGCCGAGAAAAAATGTGTGGCTCACCTAACAGGCGAGGGAATTGCTGTTT
GTGATCTTCCTGGTGATACCATGCTCCCAGGAGAAATGTAACAAGATAAT
ATTCTGAACATCAAAGGAGATTTGGAAGTAAGATCATACGAAATTATGTA
GAACAACGAGGAGTGCTAGTAATACTCTTTTTTCAACCCTTATTCTAATG
TTCACCATCTTCTCGGGTATAACTCAGCCGAGTCTCGCCACTTTATGAGA
ATCTCCTATCTAACTGAGATCCATGTTGATTTTACTCGAAGAAAGACTCG
TGTTAGAGTGAGAGTTGGAAAGAGAGGATTCCTTGCAGTTCAAGATAAAT
AATATAAATTTCAAAACATTAATTTGACTTGAAAACCTTAAAGCTCATCA
ACAATGTAATAAGTGGAATTTTGTATAACCTATTTTCAGTTATGAAGCTT
GAGATGGGTCGGTATAAATTATTGTGTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Biological Process**
Term	Definition
GO:0006108	malate metabolic process
GO:0055114	obsolete oxidation-reduction process
GO:0005975	carbohydrate metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016615	malate dehydrogenase activity
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR010945	Malate_DH_type2
IPR015955	Lactate_DH/Glyco_Ohase_4_C
IPR022383	Lactate/malate_DH_C

Search form

Pisum_sativum_v1_Contig2781