Pisum_sativum_v1_Contig2782

Contig Overview
NamePisum_sativum_v1_Contig2782
Unique NamePisum_sativum_v1_Contig2782
Typecontig
OrganismPisum sativum (pea)
Sequence length996
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD860848ESTCD860848:1..231 +Pisum sativum unigene v1n/a
CD860805ESTCD860805:3..231 +Pisum sativum unigene v1n/a
CD860191ESTCD860191:235..594 +Pisum sativum unigene v1n/a
EX568748ESTEX568748:132..930 +Pisum sativum unigene v1n/a
AJ308139ESTAJ308139:598..981 +Pisum sativum unigene v1n/a
GH719989ESTGH719989:751..997 -Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860848CD860848Pisum sativumEST
CD860805CD860805Pisum sativumEST
CD860191CD860191Pisum sativumEST
EX568748EX568748Pisum sativumEST
AJ308139AJ308139Pisum sativumEST
GH719989GH719989Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig2782 vs. TrEMBL
Match: Q43430_PEA (Dehydrin-cognate OS=Pisum sativum GN=dhn-cog PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.434e-62
Identity = 132/217 (60.83%), Postives = 133/217 (61.29%), Query Frame = 1
Query:  208 MAEENQNKYXXXXXXXXXXXXIKDRGVFDFLGGKKKDEEHKPAQDEAIAHEFGHKVTLYEAPSETKVEEEGEKKHTSLLEKLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTSVPXXXXXXXXXXXXXXXXXXFLDKIKEKLPGGHKKTEEVTTPPPVIAAHVPXXXXXXXXXIHXXXXXXXXXXXXXXXPGYHAKTATDGEDKDHHKDETTSH 858
            MAEENQNKY            IKDRGVFDFLGGKKKDEEHKPAQDEAIAHEFGHKVTLYEAPSETKVEEEGEKKHTSLLEKLH                              DTSVP                  FLDKIKEKLPGGHKKTEEVTTPPPV+AAHVP         IH               PGYHAKTATDGEDKDHHKDETTSH
Sbjct:    1 MAEENQNKYEETTSATNSETEIKDRGVFDFLGGKKKDEEHKPAQDEAIAHEFGHKVTLYEAPSETKVEEEGEKKHTSLLEKLHRSDSSSSSSSEEEGEDGEKRKKKKEKKKKEDTSVPVEKVEVVEGTTGTEEEKGFLDKIKEKLPGGHKKTEEVTTPPPVVAAHVP-TETTATTTIHEGEKKGILEKIKEKLPGYHAKTATDGEDKDHHKDETTSH 216          
BLAST of Pisum_sativum_v1_Contig2782 vs. TrEMBL
Match: D3YBF7_TRIRP (Dehydrin b OS=Trifolium repens PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.543e-43
Identity = 112/221 (50.68%), Postives = 121/221 (54.75%), Query Frame = 1
Query:  208 MAEENQNKYXXXXXXXXXXXXIKDRGVFDFLGGKKKDEEHKPAQDEAIAHEFGHKVTLYEAPSETKVEE-EGEKKHTSLLEKLH--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTSVP-XXXXXXXXXXXXXXXXXXFLDKIKEKLPGGHKKTEEVTTPPPVIAAHVPXXXXXXXXXIHXXXXXXXXXXXXXXXPGYHAKTATDGEDKDHHKDETTSH 858
            MAEENQNKY            IKDRGVFDFLGGKKKDEEHKP Q++AI+ +F HKVTLYEAPSETKVEE EGEKKHTSLLEKLH                                DTSVP                   FL+KIK+KLP GHKKTE+VTTPPPV+A  VP                          PGYH KT TD E+KDHHKDET SH
Sbjct:    1 MAEENQNKYEDATSTTNSETEIKDRGVFDFLGGKKKDEEHKP-QEDAISTDFSHKVTLYEAPSETKVEEAEGEKKHTSLLEKLHRSDSSSSSSSEEEDENGEKRKKKKKEKKEKKEDTSVPVEKVEVVDGTTVGTEEKKGFLEKIKDKLP-GHKKTEDVTTPPPVVAP-VPTETTTTTTSHDQGEKKGILEKIKEKIPGYHPKTTTDHEEKDHHKDETASH 218          
BLAST of Pisum_sativum_v1_Contig2782 vs. TrEMBL
Match: D3YBC2_TRIRP (Dehydrin b OS=Trifolium repens PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.399e-43
Identity = 113/222 (50.90%), Postives = 120/222 (54.05%), Query Frame = 1
Query:  208 MAEENQNKYXXXXXXXXXXXXIKDRGVFDFLGGKKKDEEHKPAQDEAIAHEFGHKVTLYEAPSETKVEE-EGEKKHTSLLEKLH--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTSVP-XXXXXXXXXXXXXXXXXXFLDKIKEKLPGGHKKTEEVTTPPPVIAAHVPXXXXXXXXXIH-XXXXXXXXXXXXXXXPGYHAKTATDGEDKDHHKDETTSH 858
            MAEENQNKY            IKDRGVFDFLGGKKKDEEHKP Q+EAI+ +F HKVTLYEAPSETKVEE EGEKKHTSLLEKLH                                DTSVP                   FL+KIK+KLP GHKKTE+VTTPPPV+    P          H                PGYH KT TD EDKDHHKDET SH
Sbjct:    1 MAEENQNKYEDATSTTNSETEIKDRGVFDFLGGKKKDEEHKP-QEEAISTDFSHKVTLYEAPSETKVEEAEGEKKHTSLLEKLHRSDSSSSSSSEEEDENGEKRKKKKKEKKEKKEDTSVPVEKVEVVDGTTVVTEEKKGFLEKIKDKLP-GHKKTEDVTTPPPVV---TPVPTEITTTTSHDQGEKKGILEKIKEKIPGYHPKTTTDHEDKDHHKDETASH 217          
BLAST of Pisum_sativum_v1_Contig2782 vs. TrEMBL
Match: Q8VYY0_PEA (Ultraviolet-B-repressible dehydrin-related protein (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.582e-29
Identity = 41/66 (62.12%), Postives = 42/66 (63.64%), Query Frame = 1
Query:  646 GGHKKTEEVTTPPPVIAAHVPXXXXXXXXXIHXXXXXXXXXXXXXXXPGYHAKTATDGEDKDHHKD 843
            GGHKKTEEVTTPPPV+AAHVP         IH               PGYHAKTATDGEDKDHHKD
Sbjct:   12 GGHKKTEEVTTPPPVVAAHVPTETTATTTTIHEGEKKGILEKIKEKLPGYHAKTATDGEDKDHHKD 77          

HSP 2 Score: 67.0106 bits (162), Expect = 4.582e-29
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 3
Query:  846 DYFSLNMIDWLCWFVALGVFCLINYYH 926
            DYFSLNMIDWLCWFVALGVFCLINYYH
Sbjct:   79 DYFSLNMIDWLCWFVALGVFCLINYYH 105          
BLAST of Pisum_sativum_v1_Contig2782 vs. TrEMBL
Match: Q41111_PHAVU (Dehydrin OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.231e-14
Identity = 79/218 (36.24%), Postives = 88/218 (40.37%), Query Frame = 1
Query:  208 MAEENQNKYXXXXXXXXXXXXIKDRGVFDFLGGKKKDEEHKPAQDEAIAHEFGHKVTLYEAPSETKVEEEGEKKHTSLLEKLH-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTSVPXXXXXXXXXXXXXXXXXXFLDKIKEKLPGGHKKTEEVTTPPPVIAAHVPXXXXXXXXXIHXXXXXXXXXXXXXXXPGYHAKTATDGE 822
            MAEE QNKY            ++DRGVFDFLG  KK EE KP Q+E I  EF  K+T+    SE K EEEGEKKH SLLEKLH                                           DTSVP                  FL+KIKEKLP GHKK+EE   PPP      P                          PGYH+KT  + E
Sbjct:    1 MAEETQNKYETAESSEVE---VQDRGVFDFLG--KKKEEEKP-QEEVIVTEF-EKITV----SEEKKEEEGEKKH-SLLEKLHRSDSSSSSSSEEEGEDGEKKKKKKKEKKEKKKIEEKIEGYHKEDTSVP----VEKVEVVESEEKKGFLEKIKEKLP-GHKKSEEAAAPPP-----PPPAATSSEHEGEAKEKKGILEKIKEKLPGYHSKTEEEKE 196          
BLAST of Pisum_sativum_v1_Contig2782 vs. TrEMBL
Match: C6TAX7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.032e-12
Identity = 81/233 (34.76%), Postives = 91/233 (39.06%), Query Frame = 1
Query:  208 MAEENQNKYXXXXXXXXXXXXIKDRGVFDFLGGKKKDEEHKP-AQDEAIAHEFGHKVTLYEAPSETKVEEEGEKKHTSLLEKLH------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTSVPXXXXXXXXXXXXXXXXXXFLDKIKEKLPGGHKKTEE--VTTPPPVIAAHVPXXXXXXXXXIHXXXXXXXXXXXXXXXPGYHAKTATDGEDKDHHKD 843
            MA+E QNKY            ++DRGVFDFL GKKKDEE KP  Q+E IA EF  KVT         V ++GE KH SLLEKLH                                                DTSVP                  FLDKIKEKLP GHKKTEE   TTPPP                                 PGYH+KT    E+K+  K+
Sbjct:    1 MADETQNKYESSEVE------VQDRGVFDFL-GKKKDEEDKPHPQEEVIATEF-QKVT---------VSDQGENKH-SLLEKLHRSDSSSSSSSEEEGEDGEKRKKKKKEKKGLKEKIEEKIEGDHHHHKDEDTSVP-VEKVEVVETAHAEEKKGFLDKIKEKLP-GHKKTEEATATTPPPPPPVASLEHGEGAHHEGEAKEKKGILEKIKEKLPGYHSKTE---EEKEKEKE 210          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2782 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
Q43430_PEA1.434e-6260.83Dehydrin-cognate OS=Pisum sativum GN=dhn-cog PE=2 ... [more]
D3YBF7_TRIRP2.543e-4350.68Dehydrin b OS=Trifolium repens PE=3 SV=1[more]
D3YBC2_TRIRP7.399e-4350.90Dehydrin b OS=Trifolium repens PE=3 SV=1[more]
Q8VYY0_PEA4.582e-2962.12Ultraviolet-B-repressible dehydrin-related protein... [more]
Q41111_PHAVU4.231e-1436.24Dehydrin OS=Phaseolus vulgaris PE=2 SV=1[more]
C6TAX7_SOYBN3.032e-1234.76Putative uncharacterized protein OS=Glycine max PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000167DehydrinPFAMPF00257Dehydrincoord: 44..215
score: 1.5
IPR000167DehydrinPROSITEPS00315DEHYDRIN_1coord: 101..119
score
IPR000167DehydrinPROSITEPS00823DEHYDRIN_2coord: 200..207
score: NAcoord: 152..159
score
NoneNo IPR availableSEGsegsegcoord: 22..33
score: NAcoord: 96..125
score: NAcoord: 131..148
score: NAcoord: 180..188
score: NAcoord: 191..205
score
NoneNo IPR availableSEGsegsegcoord: 38..71
score
NoneNo IPR availableSEGsegsegcoord: 1..24
score: NAcoord: 67..79
score
NoneNo IPR availableSEGsegsegcoord: 7..18
score
NoneNo IPR availableSEGsegsegcoord: 2..14
score: NAcoord: 54..80
score: NAcoord: 123..143
score
NoneNo IPR availableSEGsegsegcoord: 11..24
score: NAcoord: 67..86
score
NoneNo IPR availableSEGsegsegcoord: 28..52
score
NoneNo IPR availableSEGsegsegcoord: 30..79
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2782 ID=Pisum_sativum_v1_Contig2782; Name=Pisum_sativum_v1_Contig2782; organism=Pisum sativum; type=contig; length=996bp
AAACGAAAACCCAACAAAAACTACATCACAATAATGGTCACCACTCACTT
CACCATGCTTTCACCATCCCTTTTTTATACAGAAAAACCAAAGACTATCA
TCATCGTCTCATACTTTACCTTTCATTTCAGAGTTACAGCTACATAATCC
ATTTTAGTTATAGTTAATTAATTTCCAGTTCGATCCATCTTGTTAGTAGT
GATCATCATGGCTGAGGAGAATCAGAACAAGTACGAGGAGACTACATCCG
CAACCAACTCTGAGACAGAGATCAAGGACAGAGGTGTTTTTGATTTTCTC
GGTGGTAAGAAAAAGGATGAAGAACATAAGCCTGCTCAAGATGAGGCGAT
TGCCCACGAGTTTGGTCACAAGGTGACTTTGTATGAAGCACCATCGGAAA
CCAAAGTTGAAGAGGAAGGTGAAAAGAAACACACCAGTCTCTTGGAGAAA
CTTCACCGATCTGACAGCTCATCAAGCTCCTCAAGTGAAGAGGAAGGAGA
AGATGGTGAGAAAAGAAAGAAGAAGAAGGAAAAGAAGAAGAAAGAAGACA
CTTCGGTGCCAGTTGAGAAAGTTGAGGTTGTTGAAGGAACAACCGGGACT
GAAGAAAAGAAGGGTTTCCTTGACAAAATTAAGGAGAAGCTTCCCGGAGG
ACACAAGAAAACAGAGGAAGTAACAACTCCTCCACCAGTTATTGCTGCTC
ATGTTCCAACTGAGACAACAGCTACAACAACAACTATTCATGAGGGAGAG
AAGAAAGGTATTTTGGAAAAGATCAAAGAGAAGCTTCCTGGTTATCATGC
TAAGACTGCTACTGATGGTGAAGACAAAGATCATCACAAGGATGAGACTA
CTTCTCATTGAATATGATCGATTGGTTGTGTTGGTTTGTGGCTTTGGGGG
TGTTTTGTTTAATTAATTACTATCATTAAGGCCTTGTGTGGTGAGTTCTT
TCTTGAATTAATGGTATATGTATTTGGTTCTTAACTTGTCTTTGTG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009415response to water
Vocabulary: INTERPRO
TermDefinition
IPR000167Dehydrin