Pisum_sativum_v1_Contig2784

Contig Overview
NamePisum_sativum_v1_Contig2784
Unique NamePisum_sativum_v1_Contig2784
Typecontig
OrganismPisum sativum (pea)
Sequence length318
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD860990ESTCD860990:112..259 -Pisum sativum unigene v1n/a
CD860915ESTCD860915:26..254 +Pisum sativum unigene v1n/a
CD860816ESTCD860816:1..318 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860990CD860990Pisum sativumEST
CD860915CD860915Pisum sativumEST
CD860816CD860816Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.988e-13
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPGA
Sbjct:  234 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 265
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.666e-10
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENL DHLD+PVANNAWV+ATKF PG+
Sbjct:  237 TGKGPLENLFDHLDDPVANNAWVFATKFAPGS 268
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 4.102e-9
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PVANNAW YAT FVPG
Sbjct:  234 TGKGPIENLFDHLADPVANNAWAYATNFVPG 264
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.358e-9
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DH+++PVANNAW YAT FVPG
Sbjct:  234 TGKGPIENLSDHINDPVANNAWAYATNFVPG 264
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.358e-9
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PVANNAW YAT FVPG
Sbjct:  119 TGKGPIENLYDHLADPVANNAWAYATNFVPG 149
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.358e-9
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PVANNAW YAT FVPG
Sbjct:  235 TGKGPIENLYDHLADPVANNAWAYATNFVPG 265
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.139e-9
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct:  234 TGKGPIENLFDHVADPVANNAWAYATNFVPG 264
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.139e-9
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct:  232 TGKGPIENLFDHVADPVANNAWAYATNFVPG 262
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.139e-9
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct:  232 TGKGPIENLFDHVADPVANNAWAYATNFVPG 262
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.194e-8
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct:  206 TGKGPIENLSDHIADPVANNAWAYATNFVPG 236
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: Q5I8X1_PEA (Light-harvesting chlorophyll-a/b binding protein Lhcb3 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.649e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPGA
Sbjct:  234 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 265
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: Q5DNZ6_TOBAC (Chloroplast chlorophyll a-b binding protein (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.649e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPGA
Sbjct:  168 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 199
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: Q04918_PEA (Chlorophyll a/b-binding protein OS=Pisum sativum GN=Lhcb3*1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.649e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPGA
Sbjct:  234 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 265
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: Q9SDT2_DAUCA (Chlorophyll a/b-binding protein OS=Daucus carota GN=cab3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.675e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPG+
Sbjct:  233 TGKGPLENLLDHLDNPVANNAWVYATKFVPGS 264
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: B9N576_POPTR (Light-harvesting complex II protein Lhcb3 OS=Populus trichocarpa GN=Lhcb3-1 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.675e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPG+
Sbjct:  232 TGKGPLENLLDHLDNPVANNAWVYATKFVPGS 263
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: B9I013_POPTR (Light-harvesting complex II protein Lhcb3 OS=Populus trichocarpa GN=Lhcb3-2 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.675e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPG+
Sbjct:  232 TGKGPLENLLDHLDNPVANNAWVYATKFVPGS 263
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: A9PJV4_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.675e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPG+
Sbjct:  193 TGKGPLENLLDHLDNPVANNAWVYATKFVPGS 224
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: A5BEB1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031291 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.675e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAWVYATKFVPG+
Sbjct:  213 TGKGPLENLLDHLDNPVANNAWVYATKFVPGS 244
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: B1P0S0_MEDFA (Chloroplast chlorophyll-a/b binding protein OS=Medicago falcata GN=CAB PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.268e-11
Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDH+DNPVANNAWVYATKFVPG+
Sbjct:  235 TGKGPLENLLDHIDNPVANNAWVYATKFVPGS 266
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Match: Q9S969_GINBI (Light-harvesting complex B type 3, LHCB3 (Fragment) OS=Ginkgo biloba PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.186e-11
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAW YATKFVPGA
Sbjct:  101 TGKGPLENLLDHLDNPVANNAWEYATKFVPGA 132
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT5G54270.1 (| Symbols: LHCB3, LHCB3*1 | light-harvesting chlorophyll B-binding protein 3 | chr5:22038424-22039383 FORWARD LENGTH=265)

HSP 1 Score: 67.781 bits (164), Expect = 1.555e-12
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPGA 97
            TGKGPLENLLDHLDNPVANNAW +ATKF PGA
Sbjct:  234 TGKGPLENLLDHLDNPVANNAWAFATKFAPGA 265
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT3G27690.1 (| Symbols: LHCB2.4, LHCB2.3, LHCB2 | photosystem II light harvesting complex gene 2.3 | chr3:10256002-10256921 FORWARD LENGTH=266)

HSP 1 Score: 59.3066 bits (142), Expect = 5.531e-10
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct:  235 TGKGPIENLFDHIADPVANNAWAYATNFVPG 265
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT2G05070.1 (| Symbols: LHCB2.2, LHCB2 | photosystem II light harvesting complex gene 2.2 | chr2:1799436-1800329 REVERSE LENGTH=265)

HSP 1 Score: 59.3066 bits (142), Expect = 5.531e-10
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PVANNAW YAT FVPG
Sbjct:  234 TGKGPIENLFDHLADPVANNAWSYATNFVPG 264
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT2G05100.1 (| Symbols: LHCB2.1, LHCB2 | photosystem II light harvesting complex gene 2.1 | chr2:1823449-1824331 REVERSE LENGTH=265)

HSP 1 Score: 59.3066 bits (142), Expect = 5.531e-10
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PVANNAW YAT FVPG
Sbjct:  234 TGKGPIENLFDHLADPVANNAWSYATNFVPG 264
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT2G34420.1 (| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265)

HSP 1 Score: 56.6102 bits (135), Expect = 3.585e-9
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGPLENL DHL +PV NNAW +AT FVPG
Sbjct:  234 TGKGPLENLADHLADPVNNNAWAFATNFVPG 264
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT2G34430.1 (| Symbols: LHB1B1, LHCB1.4 | light-harvesting chlorophyll-protein complex II subunit B1 | chr2:14524818-14525618 FORWARD LENGTH=266)

HSP 1 Score: 56.6102 bits (135), Expect = 3.585e-9
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGPLENL DHL +PV NNAW +AT FVPG
Sbjct:  235 TGKGPLENLADHLADPVNNNAWAFATNFVPG 265
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT1G29930.1 (| Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267)

HSP 1 Score: 55.8398 bits (133), Expect = 6.115e-9
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PV NNAW +AT FVPG
Sbjct:  236 TGKGPIENLADHLADPVNNNAWAFATNFVPG 266
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT1G29920.1 (| Symbols: CAB2, AB165, LHCB1.1 | chlorophyll A/B-binding protein 2 | chr1:10475089-10475892 REVERSE LENGTH=267)

HSP 1 Score: 55.8398 bits (133), Expect = 6.115e-9
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PV NNAW +AT FVPG
Sbjct:  236 TGKGPIENLADHLADPVNNNAWAFATNFVPG 266
[Close]
BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Match: AT1G29910.1 (| Symbols: CAB3, AB180, LHCB1.2 | chlorophyll A/B binding protein 3 | chr1:10472443-10473246 REVERSE LENGTH=267)

HSP 1 Score: 55.8398 bits (133), Expect = 6.115e-9
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 2 
Query:    2 TGKGPLENLLDHLDNPVANNAWVYATKFVPG 94
            TGKGP+ENL DHL +PV NNAW +AT FVPG
Sbjct:  236 TGKGPIENLADHLADPVNNNAWAFATNFVPG 266
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2784 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CB23_SOLLC7.988e-13100.00Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB23_HORVU1.666e-1084.38Chlorophyll a-b binding protein of LHCII type III,... [more]
CB21_GOSHI4.102e-980.65Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB24_SOLLC5.358e-977.42Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB22_PINSY5.358e-980.65Chlorophyll a-b binding protein type 2 member 2 (F... [more]
CB21_PINTH5.358e-980.65Chlorophyll a-b binding protein type I, chloroplas... [more]
CB23_TOBAC9.139e-977.42Chlorophyll a-b binding protein 36, chloroplastic ... [more]
CB23_ORYSJ9.139e-977.42Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_ORYSI9.139e-977.42Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB25_SOLLC1.194e-877.42Chlorophyll a-b binding protein 5, chloroplastic (... [more]
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BLAST of Pisum_sativum_v1_Contig2784 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q5I8X1_PEA1.649e-11100.00Light-harvesting chlorophyll-a/b binding protein L... [more]
Q5DNZ6_TOBAC1.649e-11100.00Chloroplast chlorophyll a-b binding protein (Fragm... [more]
Q04918_PEA1.649e-11100.00Chlorophyll a/b-binding protein OS=Pisum sativum G... [more]
Q9SDT2_DAUCA3.675e-1196.88Chlorophyll a/b-binding protein OS=Daucus carota G... [more]
B9N576_POPTR3.675e-1196.88Light-harvesting complex II protein Lhcb3 OS=Popul... [more]
B9I013_POPTR3.675e-1196.88Light-harvesting complex II protein Lhcb3 OS=Popul... [more]
A9PJV4_9ROSI3.675e-1196.88Putative uncharacterized protein OS=Populus tricho... [more]
A5BEB1_VITVI3.675e-1196.88Putative uncharacterized protein OS=Vitis vinifera... [more]
B1P0S0_MEDFA6.268e-1193.75Chloroplast chlorophyll-a/b binding protein OS=Med... [more]
Q9S969_GINBI8.186e-1196.88Light-harvesting complex B type 3, LHCB3 (Fragment... [more]
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BLAST of Pisum_sativum_v1_Contig2784 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 9
Match NameE-valueIdentityDescription
AT5G54270.11.555e-1290.63| Symbols: LHCB3, LHCB3*1 | light-harvesting chlor... [more]
AT3G27690.15.531e-1077.42| Symbols: LHCB2.4, LHCB2.3, LHCB2 | photosystem I... [more]
AT2G05070.15.531e-1080.65| Symbols: LHCB2.2, LHCB2 | photosystem II light h... [more]
AT2G05100.15.531e-1080.65| Symbols: LHCB2.1, LHCB2 | photosystem II light h... [more]
AT2G34420.13.585e-977.42| Symbols: LHB1B2, LHCB1.5 | photosystem II light ... [more]
AT2G34430.13.585e-977.42| Symbols: LHB1B1, LHCB1.4 | light-harvesting chlo... [more]
AT1G29930.16.115e-974.19| Symbols: CAB1, AB140, CAB140, LHCB1.3 | chloroph... [more]
AT1G29920.16.115e-974.19| Symbols: CAB2, AB165, LHCB1.1 | chlorophyll A/B-... [more]
AT1G29910.16.115e-974.19| Symbols: CAB3, AB180, LHCB1.2 | chlorophyll A/B ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..25
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2784 ID=Pisum_sativum_v1_Contig2784; Name=Pisum_sativum_v1_Contig2784; organism=Pisum sativum; type=contig; length=318bp
GACTGGTAAAGGACCTTTGGAGAATCTGTTGGATCACCTTGATAACCCTG
TTGCTAACAATGCTTGGGTTTATGCTACAAAGTTTGTGCCTGGTGCTTAA
ACATTTGATGTTATCTATGATTGCATTTGTGTGAAGGATGAGACTTGGCA
TTATTGTATAAATTATGATGTTGATGGTTGTTGGATTAGTGCACTTGTTT
GTTTCTTGGTTCTTAAGGACTAAGGTTCATTTTAAAGATGGGAGATCTTT
TGTTAATATGTTTTGTTCAAACCAACCAATGAGAAAAGTTATGTCAACAT
GATTTGCTTAAACCAAAT
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