Pisum_sativum_v1_Contig2824

Contig Overview


Name	Pisum_sativum_v1_Contig2824
Unique Name	Pisum_sativum_v1_Contig2824
Type	contig
Organism	Pisum sativum (pea)
Sequence length	337

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CD860518	EST	CD860518:1..314 +
CD860317	EST	CD860317:1..314 +
CD858623	EST	CD858623:2..337 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD860518	CD860518	Pisum sativum	EST
CD860317	CD860317	Pisum sativum	EST
CD858623	CD858623	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.284e-34
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFSSTLRA+TSGQAFPQCVFDHW+ + SDPLEAGSQA+ LV+ IRKRKGLKEQMTPLS+FED
Sbjct:  763 GTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFED 841

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.060e-29
Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP++N+KAYLPV+ESFGF+STLRAAT+GQAFPQCVFDHW+ + SDP + GSQA  LV DIRKRKGLK +   LS++ED
Sbjct:  765 GTPIFNLKAYLPVIESFGFTSTLRAATAGQAFPQCVFDHWEAMGSDPTQVGSQANTLVMDIRKRKGLKPEPAALSEYED 843

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=1 SV=4)

HSP 1 Score: 107.071 bits (266), Expect = 2.967e-23
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW  L  DPLEAG++  Q+V D RKRKGLKE +  L ++ D
Sbjct:  772 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLD 850

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.609e-23
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPV ESFGF+  LR AT+GQAFPQ VFDHW  +S DPL+  S+  Q+V + RKRKGLKE +   +++ D
Sbjct:  762 GTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYD 840

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.307e-22
Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP   IKAYLPV +SF F++ LRAATSG+AFPQCVFDHW+ ++ DPLE GS+  +LV  IR+RK +KE++  L ++ D
Sbjct:  752 GTPQVEIKAYLPVADSFKFTTVLRAATSGKAFPQCVFDHWELINGDPLEKGSKTEELVKAIRRRKNIKEEIPALDNYLD 830

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 7.307e-22
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW  L  DP ++ S+ +Q+V + RKRKGLKE +  L +F D
Sbjct:  778 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLD 856

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.543e-22
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPL+ +KAYLPV ESFGF+  LR AT GQAFPQ VFDHW TL+SDPL+  S+A ++VT  RKR G+KE++    ++ D
Sbjct:  762 GTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYD 840

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=1 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 1.246e-21
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW  L  DP +  S+ +Q+V + RKRKGLKE +  L +F D
Sbjct:  778 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLD 856

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 1.628e-21
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW  L  DP +  S+ +Q+V + RKRKGLKE +  L +F D
Sbjct:  778 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 856

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.628e-21
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW  L  DP +  S+ +Q+V + RKRKGLKE +  L +F D
Sbjct:  778 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 856

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: B9P6B9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_748394 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.720e-37
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFS TLRAATSGQAFPQCVFDHWDT+SSDP+EAG+QAAQLVT+IRKRKGLKEQMTPLSDFED
Sbjct:   82 GTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDTMSSDPMEAGTQAAQLVTEIRKRKGLKEQMTPLSDFED 160

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: B9HH11_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562884 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.720e-37
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFS TLRAATSGQAFPQCVFDHWDT+SSDP+EAG+QAAQLVT+IRKRKGLKEQMTPLSDFED
Sbjct:  763 GTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDTMSSDPMEAGTQAAQLVTEIRKRKGLKEQMTPLSDFED 841

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: A9P8C9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.720e-37
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFS TLRAATSGQAFPQCVFDHWDT+SSDP+EAG+QAAQLVT+IRKRKGLKEQMTPLSDFED
Sbjct:   33 GTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDTMSSDPMEAGTQAAQLVTEIRKRKGLKEQMTPLSDFED 111

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: B9H639_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_558749 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.777e-37
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPV+ESFGFS TLRAATSGQAFPQCVFDHWD +SSDPLEAG+QAAQLVTDIRKRKGLKEQMTPLSDFED
Sbjct:  763 GTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEAGTQAAQLVTDIRKRKGLKEQMTPLSDFED 841

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: B9RI35_RICCO (Eukaryotic translation elongation factor, putative OS=Ricinus communis GN=RCOM_1575900 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.955e-36
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPV+ESFGFS TLRAATSGQAFPQCVFDHWD +SSDP+EAGSQAAQLVTDIRKRKGLKEQMTPLS+FED
Sbjct:  763 GTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPMEAGSQAAQLVTDIRKRKGLKEQMTPLSEFED 841

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: B9HH10_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562883 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.554e-36
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFS TLRAATSGQAFPQCVFDHWDT+SSDP+EAG+QAAQLV +IRKRKGLKEQMTPLSDFED
Sbjct:  763 GTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDTMSSDPMEAGTQAAQLVAEIRKRKGLKEQMTPLSDFED 841

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: A9PIF0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.554e-36
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFS TLRAATSGQAFPQCVFDHWDT+SSDP+EAG+QAAQLV +IRKRKGLKEQMTPLSDFED
Sbjct:  536 GTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDTMSSDPMEAGTQAAQLVAEIRKRKGLKEQMTPLSDFED 614

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: Q7XYB6_WHEAT (Elongation factor (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.356e-36
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPV+ESFGFSSTLRAATSGQAFPQCVFDHWD +SSDPLEAGSQ+A LVT+IRKRKGLKEQMTPLSDFED
Sbjct:   87 GTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDIMSSDPLEAGSQSATLVTEIRKRKGLKEQMTPLSDFED 165

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: D5ACX5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.430e-36
Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = -3

Query:   84 RGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 323
            +GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWD + SDPLE GSQA QLVTDIRKRKGLKE MTPLSDFED
Sbjct:  186 QGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMGSDPLETGSQAGQLVTDIRKRKGLKESMTPLSDFED 265

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Match: C5XJZ3_SORBI (Putative uncharacterized protein Sb03g034200 OS=Sorghum bicolor GN=Sb03g034200 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.823e-35
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPV+ESFGFSS LRAATSGQAFPQCVFDHWD + SDPLEAGSQAAQLV DIRKRKGLKEQMTPLS+FED
Sbjct:  763 GTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMGSDPLEAGSQAAQLVLDIRKRKGLKEQMTPLSEFED 841

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Match: AT3G12915.2 (| Symbols: | Ribosomal protein S5/Elongation factor G/III/V family protein | chr3:4112999-4115708 FORWARD LENGTH=767)

HSP 1 Score: 145.591 bits (366), Expect = 5.973e-36
Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFS  LRAATSGQAFPQCVFDHWD +SSDPLE GSQAA LV DIRKRKGLK QMTPLSD+ED
Sbjct:  687 GTPLYNIKAYLPVVESFGFSGQLRAATSGQAFPQCVFDHWDMMSSDPLETGSQAATLVADIRKRKGLKLQMTPLSDYED 765

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Match: AT3G12915.1 (| Symbols: | Ribosomal protein S5/Elongation factor G/III/V family protein | chr3:4112999-4115708 FORWARD LENGTH=820)

HSP 1 Score: 145.591 bits (366), Expect = 5.973e-36
Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFS  LRAATSGQAFPQCVFDHWD +SSDPLE GSQAA LV DIRKRKGLK QMTPLSD+ED
Sbjct:  740 GTPLYNIKAYLPVVESFGFSGQLRAATSGQAFPQCVFDHWDMMSSDPLETGSQAATLVADIRKRKGLKLQMTPLSDYED 818

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Match: AT1G56070.1 (| Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843)

HSP 1 Score: 142.895 bits (359), Expect = 3.871e-35
Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTPLYNIKAYLPVVESFGFSS LRAATSGQAFPQCVFDHW+ +SSDPLE G+QA+ LV DIRKRKGLKE MTPLS+FED
Sbjct:  763 GTPLYNIKAYLPVVESFGFSSQLRAATSGQAFPQCVFDHWEMMSSDPLEPGTQASVLVADIRKRKGLKEAMTPLSEFED 841

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Match: AT5G25230.1 (| Symbols: | Ribosomal protein S5/Elongation factor G/III/V family protein | chr5:8739709-8743594 FORWARD LENGTH=973)

HSP 1 Score: 71.633 bits (174), Expect = 1.096e-13
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQ------------AAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP Y +KA+LPV+ESFGF + LR  T GQAF   VFDHW  +  DPL+   Q            A + +   R+RKG+ E ++    F++
Sbjct:  865 GTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSGNKFFDE 955

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Match: AT1G06220.1 (| Symbols: MEE5, CLO, GFA1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:1900524-1904583 FORWARD LENGTH=987)

HSP 1 Score: 71.633 bits (174), Expect = 1.096e-13
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQ------------AAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP Y +KA+LPV+ESFGF + LR  T GQAF   VFDHW  +  DPL+   Q            A + +   R+RKG+ E ++    F++
Sbjct:  879 GTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSGNKFFDE 969

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Match: AT1G06220.2 (| Symbols: MEE5 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:1900524-1904583 FORWARD LENGTH=987)

HSP 1 Score: 71.633 bits (174), Expect = 1.096e-13
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = -3

Query:   84 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPLEAGSQ------------AAQLVTDIRKRKGLKEQMTPLSDFED 320
            GTP Y +KA+LPV+ESFGF + LR  T GQAF   VFDHW  +  DPL+   Q            A + +   R+RKG+ E ++    F++
Sbjct:  879 GTPAYIVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSGNKFFDE 969

[Close]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Match: AT3G22980.1 (| Symbols: | Ribosomal protein S5/Elongation factor G/III/V family protein | chr3:8160269-8163316 REVERSE LENGTH=1015)

HSP 1 Score: 55.4546 bits (132), Expect = 8.129e-9
Identity = 32/84 (38.10%), Postives = 43/84 (51.19%), Query Frame = -3

Query:  120 GTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDTLSSDPL----------EAG-------SQAAQLVTDIRKRKGL 320
            G+ L+ + AY+PV ESFGF+  LR  TSG A    V  HW+ L  DP           E G       + A +L+  +R+RKGL
Sbjct:  912 GSSLFTVHAYVPVSESFGFADELRKGTSGGASALMVLSHWEMLEEDPFFVPKTEEEIEEFGDGASVLPNTARKLINAVRRRKGL 995

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2824 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
EF2_BETVU	1.284e-34	87.34	Elongation factor 2 OS=Beta vulgaris PE=2 SV=1	[more]
EF2_CHLKE	8.060e-29	70.89	Elongation factor 2 OS=Chlorella kessleri PE=2 SV=...	[more]
EF2_CAEEL	2.967e-23	62.03	Elongation factor 2 OS=Caenorhabditis elegans GN=e...	[more]
EF2_SCHPO	6.609e-23	62.03	Elongation factor 2 OS=Schizosaccharomyces pombe G...	[more]
EF2_CRYPV	7.307e-22	58.23	Elongation factor 2 OS=Cryptosporidium parvum PE=3...	[more]
EF2_CHICK	7.307e-22	58.23	Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ...	[more]
EF2_CANGA	9.543e-22	59.49	Elongation factor 2 OS=Candida glabrata GN=EFT1 PE...	[more]
EF2_CRIGR	1.246e-21	58.23	Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ...	[more]
EF2_RAT	1.628e-21	58.23	Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P...	[more]
EF2_PONAB	1.628e-21	58.23	Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S...	[more]

BLAST of Pisum_sativum_v1_Contig2824 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9P6B9_POPTR	6.720e-37	93.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9HH11_POPTR	6.720e-37	93.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9P8C9_POPTR	6.720e-37	93.67	Putative uncharacterized protein OS=Populus tricho...	[more]
B9H639_POPTR	8.777e-37	93.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RI35_RICCO	1.955e-36	92.41	Eukaryotic translation elongation factor, putative...	[more]
B9HH10_POPTR	2.554e-36	92.41	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PIF0_POPTR	2.554e-36	92.41	Putative uncharacterized protein OS=Populus tricho...	[more]
Q7XYB6_WHEAT	4.356e-36	92.41	Elongation factor (Fragment) OS=Triticum aestivum ...	[more]
D5ACX5_PICSI	7.430e-36	91.25	Putative uncharacterized protein OS=Picea sitchens...	[more]
C5XJZ3_SORBI	2.823e-35	91.14	Putative uncharacterized protein Sb03g034200 OS=So...	[more]

BLAST of Pisum_sativum_v1_Contig2824 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT3G12915.2	5.973e-36	88.61	\| Symbols: \| Ribosomal protein S5/Elongation fact...	[more]
AT3G12915.1	5.973e-36	88.61	\| Symbols: \| Ribosomal protein S5/Elongation fact...	[more]
AT1G56070.1	3.871e-35	86.08	\| Symbols: LOS1 \| Ribosomal protein S5/Elongation ...	[more]
AT5G25230.1	1.096e-13	40.66	\| Symbols: \| Ribosomal protein S5/Elongation fact...	[more]
AT1G06220.1	1.096e-13	40.66	\| Symbols: MEE5, CLO, GFA1 \| Ribosomal protein S5/...	[more]
AT1G06220.2	1.096e-13	40.66	\| Symbols: MEE5 \| Ribosomal protein S5/Elongation ...	[more]
AT3G22980.1	8.129e-9	38.10	\| Symbols: \| Ribosomal protein S5/Elongation fact...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000640	Translation elongation factor EFG/EF2, C-terminal	GENE3D	3.30.70.240	no description	coord: 6..72 score: 1.4
IPR000640	Translation elongation factor EFG/EF2, C-terminal	PFAM	PF00679	EFG_C	coord: 8..54 score: 3
IPR009022	Elongation factor G/III/V	SUPERFAMILY	54980	EF-G C-terminal domain-like	coord: 6..86 score: 1.1
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 1..85 score: 3.7
None	No IPR available	PANTHER	PTHR23115:SF4	EUKARYOTIC TRANSLATION ELONGATION FACTOR 2	coord: 1..85 score: 3.7

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2824 ID=Pisum_sativum_v1_Contig2824; Name=Pisum_sativum_v1_Contig2824; organism=Pisum sativum; type=contig; length=337bp
ACAGAACTTTTAAAACTAGGTCAACAAAGTTTTCATAACAGCCTAGTTCA
TAGATATAAAATAGTAAAAGTAATTTAAAGCTTGTCTTCAAAGTCAGAGA
GTGGGGTCATCTGCTCCTTGAGGCCCTTCCTCTTGCGAATGTCGGTAACA
AGCTGTGCAGCTTGTGAACCAGCCTCCAAGGGATCTGAGGACAATGTATC
CCAATGATCAAAGACACACTGGGGGAAAGCCTGCCCAGATGTCGCAGCCC
TCAGTGTGCTGGAAAATCCAAAGGACTCGACAACAGGGAGGTATGCTTTG
ATGTTGTAAAGTGGGGTACCTCGGCCGCGACCACGCT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000640	EFG_V-like
IPR009022	EFG_III

Search form

Pisum_sativum_v1_Contig2824