Pisum_sativum_v1_Contig2839

Contig Overview


Name	Pisum_sativum_v1_Contig2839
Unique Name	Pisum_sativum_v1_Contig2839
Type	contig
Organism	Pisum sativum (pea)
Sequence length	795

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CD860442	EST	CD860442:1..373 -	Pisum sativum unigene v1	n/a
EX568731	EST	EX568731:299..775 +	Pisum sativum unigene v1	n/a
EX568730	EST	EX568730:84..795 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD860442	CD860442	Pisum sativum	EST
EX568731	EX568731	Pisum sativum	EST
EX568730	EX568730	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_SOLLC (Histidine decarboxylase OS=Solanum lycopersicum GN=HDC PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.384e-71
Identity = 125/223 (56.05%), Postives = 166/223 (74.44%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKR-VAWFEEGKYQPYCIASDVGEN 668
            KGA+DDLD VIQ LE  G+S+D +YIH D AL GL++PF+K A K+TFKKPIGS+S+SGHKF+GCPM CGVQITR  +++ LS+ +EY+ S DATI GSRNG  PIFLWY L++KG+   Q++   C+ NA Y KDRL++AGI  MLN+ S TVVFERP D +FIR+W L C   +AHVV+MP +T + +D F  +L+Q+R   W+++ K  P C+A D+  N
Sbjct:  182 KGAIDDLDFVIQTLENCGYSNDNYYIHCDRALCGLILPFIKHAKKITFKKPIGSISISGHKFLGCPMSCGVQITRRSYVSTLSK-IEYINSADATISGSRNGFTPIFLWYCLSKKGHARLQQDSITCIENARYLKDRLLEAGISVMLNDFSITVVFERPCDHKFIRRWNLCCLRGMAHVVIMPGITRETIDSFFKDLMQERNYKWYQDVKALPPCLADDLALN 403

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_VIBHB (Histidine decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hdc PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.475e-38
Identity = 78/199 (39.20%), Postives = 124/199 (62.31%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNV-TIQKLDEFLNELV 596
            +GA+DD+  +   L   G     +YIH D AL G+++PFV + P  +F+  I S++VSGHK +G P+PCG+ + +   ++ +S  V+Y++SRD TI GSRNGH+ +F+W  +       +Q +V+ CL  A Y+  RL  AGI A  N+ S+TVVF  P  E   RK  LA  G++AH+V MP++ +  +LD  +++++
Sbjct:  173 RGAIDDIGRIQNDLATLGLDRKDYYIHADAALSGMILPFVDQPPPYSFQDGIDSITVSGHKMIGSPIPCGIVLAKQHMVDQISVEVDYISSRDQTISGSRNGHSALFMWTAIKSHSLSDWQSKVKLCLDMADYTVQRLQKAGIEAWRNKNSNTVVFPCP-SEPIWRKHSLATSGDVAHIVTMPHLNSTAQLDALIDDVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_VIBAN (Histidine decarboxylase OS=Vibrio anguillarum GN=hdc PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.741e-38
Identity = 77/199 (38.69%), Postives = 123/199 (61.81%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVT-IQKLDEFLNELV 596
            +GA D++  + Q L   G   + +YIH D AL G++MPFV++    +F+  I S+SVSGHK +G P+PCG+ + +   ++ +S  V+Y++SRD TI GSRNGH+ +F+W  +    +  +Q +V +CL  A Y+  R  + GI A  N+ S+TVVF  P  E   RK  LA  G++AH++ MP++    KLD  + +++
Sbjct:  173 RGATDNIQRIQQDLASIGLERNDYYIHADAALSGMIMPFVEQPHPYSFEDGIDSISVSGHKMIGSPIPCGIVLAKRHMVDQISVEVDYISSRDQTISGSRNGHSALFMWTAIKSHSFVDWQGKVNQCLNMAEYTVQRFQEVGINAWRNKNSNTVVFPCP-SEPVWRKHSLANSGSVAHIITMPHLDGPDKLDPLIEDVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_PSEE4 (Histidine decarboxylase OS=Pseudomonas entomophila (strain L48) GN=hdc PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.010e-35
Identity = 72/199 (36.18%), Postives = 119/199 (59.80%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQK-LDEFLNELV 596
            +GA+D++  + Q+LEE G   + +Y+H D AL G+++PFV       F   + S+ VSGHK +G P+PCG+ + + E++  +S +V+Y+ + D TI GSRNGH P+ +W  L       +++ V+  L +A Y+ DRL  AGI A  ++ S TVVF  P      RK+ LA  G+ AH++  P+   +  +D  ++E++
Sbjct:  173 RGAIDNIATIQQRLEEVGIPREDYYLHADAALSGMILPFVDNPQPFNFADGVDSICVSGHKMIGSPIPCGIVVAKRENVERISVDVDYIRANDKTISGSRNGHTPMMMWAALRSHSPAQWRRRVRHSLNSAQYAVDRLQAAGIDAWRHDNSITVVFPCP-SSRIARKYCLATSGDTAHLITTPHHQDKSMIDALIDEVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_MORMO (Histidine decarboxylase OS=Morganella morganii GN=hdc PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 8.010e-35
Identity = 70/199 (35.18%), Postives = 123/199 (61.81%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMP-NVTIQKLDEFLNELV 596
            +GA+DD+  + ++L+ AG   + +Y+H D AL G+++PFV  A   TF   I S+ VSGHK +G P+PCG+ + + E+++ +S  ++Y+++ D TI GSRNGH P+ LW  +       +++ + + L  A Y+ DR+  AGI A  N+ S TVVF  P  E   R+  LA  G++AH++    ++   ++D+ +++++
Sbjct:  173 RGAIDDIAEIQKRLKAAGIKREDYYLHADAALSGMILPFVDDAQPFTFADGIDSIGVSGHKMIGSPIPCGIVVAKKENVDRISVEIDYISAHDKTITGSRNGHTPLMLWEAIRSHSTEEWKRRITRSLDMAQYAVDRMQKAGINAWRNKNSITVVFPCP-SERVWREHCLATSGDVAHLITTAHHLDTVQIDKLIDDVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_KLEPL (Histidine decarboxylase OS=Klebsiella planticola GN=hdc PE=3 SV=4)

HSP 1 Score: 145.206 bits (365), Expect = 3.976e-34
Identity = 67/199 (33.67%), Postives = 119/199 (59.80%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMP-NVTIQKLDEFLNELV 596
            +GA+D++ ++ Q + E G     +Y+H D AL G+++PFV       F   I S+ VSGHK +G P+PCG+ + + ++++ +S  ++Y+++ D TI GSRNGH P+ +W  +    +  +++ +++ L  A Y+ DR   AGI A  N+ S TVVF  P  E   +K  LA  G+IAH++    ++   K+D  +++++
Sbjct:  173 RGAIDNIAIIQQSISELGIERKDYYLHADAALSGMILPFVDNPQPFNFADGIDSIGVSGHKMIGSPIPCGIVVAKKKNVDRISVEIDYISAHDKTISGSRNGHTPLMMWEAIRSHSWEEWRRRIERSLNMAQYAVDRFQSAGIDAWRNKNSITVVFPCP-SEAVWKKHCLATSGDIAHLIATAHHLDSSKIDALIDDVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_PSEFL (Histidine decarboxylase OS=Pseudomonas fluorescens GN=hdc PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.857e-34
Identity = 72/199 (36.18%), Postives = 116/199 (58.29%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMP-NVTIQKLDEFLNELV 596
            +GA+D++  + Q+L++AG +   +Y+H D AL G+++PFV      +F   I S+ VSGHK +G P+PCG+ + +  ++  +S  V+Y+ + D TI GSRNGH P+ +W  L    +  ++  ++  L  A Y+ DR   +GI A  NE S TVVF  P  E    K+ LA  GN AH++  P +     +D  ++E+V
Sbjct:  174 RGALDNIVTIQQRLQQAGIARHDYYLHADAALSGMILPFVDHPQPFSFADGIDSICVSGHKMIGSPIPCGIVVAKRNNVARISVEVDYIRAHDKTISGSRNGHTPLMMWAALRSYSWAEWRHRIKHSLDTAQYAVDRFQASGIDAWRNENSITVVFPCP-SERIATKYCLATSGNSAHLITTPHHHDCSMIDALIDEVV 371

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_ACIBY (Histidine decarboxylase OS=Acinetobacter baumannii (strain AYE) GN=hdc PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.511e-33
Identity = 69/198 (34.85%), Postives = 119/198 (60.10%), Query Frame = 3

Query:    6 GAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMP-NVTIQKLDEFLNELV 596
            GA+DD++++ ++L + G     +YIH D AL G+++PFV      +F   I S+ VSGHK +G P+PCG+ + + +++  +S +V+Y+++RD TI GSRNGH  + +W  +  +     ++ +Q CL+ A Y+ DR    GI A  N  S TVVF  P  E   +K  LA  GN+AH++    +   +++D  +++++
Sbjct:  174 GAIDDIEMIQERLAQIGIMRRDYYIHADAALSGMILPFVDHPQAFSFAHGIDSICVSGHKMIGSPIPCGIVVAKRQNVERISVDVDYISTRDQTISGSRNGHTVLLMWAAIRSQTNLQRRQRIQHCLKMAQYAVDRFQAVGIPAWRNPNSITVVFPCP-SEHIWKKHYLATSGNMAHLITTAHHRDTRQIDSLIDDVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_ACIBC (Histidine decarboxylase OS=Acinetobacter baumannii (strain ACICU) GN=hdc PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.511e-33
Identity = 69/198 (34.85%), Postives = 119/198 (60.10%), Query Frame = 3

Query:    6 GAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMP-NVTIQKLDEFLNELV 596
            GA+DD++++ ++L + G     +YIH D AL G+++PFV      +F   I S+ VSGHK +G P+PCG+ + + +++  +S +V+Y+++RD TI GSRNGH  + +W  +  +     ++ +Q CL+ A Y+ DR    GI A  N  S TVVF  P  E   +K  LA  GN+AH++    +   +++D  +++++
Sbjct:  174 GAIDDIEMIQERLAQIGIMRRDYYIHADAALSGMILPFVDHPQAFSFAHGIDSICVSGHKMIGSPIPCGIVVAKRQNVERISVDVDYISTRDQTISGSRNGHTVLLMWAAIRSQTNLQRRQRIQHCLKMAQYAVDRFQAVGIPAWRNPNSITVVFPCP-SEHIWKKHYLATSGNMAHLITTAHHRDTRQIDSLIDDVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Match: DCHS_ACIB5 (Histidine decarboxylase OS=Acinetobacter baumannii (strain AB0057) GN=hdc PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.511e-33
Identity = 69/198 (34.85%), Postives = 119/198 (60.10%), Query Frame = 3

Query:    6 GAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMP-NVTIQKLDEFLNELV 596
            GA+DD++++ ++L + G     +YIH D AL G+++PFV      +F   I S+ VSGHK +G P+PCG+ + + +++  +S +V+Y+++RD TI GSRNGH  + +W  +  +     ++ +Q CL+ A Y+ DR    GI A  N  S TVVF  P  E   +K  LA  GN+AH++    +   +++D  +++++
Sbjct:  174 GAIDDIEMIQERLAQIGIMRRDYYIHADAALSGMILPFVDHPQAFSFAHGIDSICVSGHKMIGSPIPCGIVVAKRQNVERISVDVDYISTRDQTISGSRNGHTVLLMWAAIRSQTNLQRRQRIQHCLKMAQYAVDRFQAVGIPAWRNPNSITVVFPCP-SEHIWKKHYLATSGNMAHLITTAHHRDTRQIDSLIDDVI 370

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: B7FKB2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 435.261 bits (1118), Expect = 2.971e-120
Identity = 211/223 (94.62%), Postives = 216/223 (96.86%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVIQKLEEAGFS DRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVE LASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNA Y KDRLI+AGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTI+KLD+FLNELVQKR  WFE+G +QPYCIASDVGENS
Sbjct:  257 KGAVDDLDLVIQKLEEAGFSQDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVECLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKLDDFLNELVQKRATWFEDGTFQPYCIASDVGENS 479

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: C6T8E8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 7.573e-116
Identity = 198/223 (88.79%), Postives = 215/223 (96.41%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVI+KLEEAGFSHDRFYIH DGALFGLMMPFVKRAPKVTFKKP+GSVSVSGHKFVGCPMPCGVQITRLE++NAL+R+VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNA Y K RL++AGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPN+TI+KLD+FLNEL++KR  WF++GK QPYCI+SDVGE +
Sbjct:  254 KGAVDDLDLVIKKLEEAGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFKKPVGSVSVSGHKFVGCPMPCGVQITRLEYVNALARDVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKGRLVEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNITIEKLDDFLNELLEKRATWFQDGKDQPYCISSDVGEKN 476

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: D7SSC2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_76.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034903001 PE=4 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 8.967e-109
Identity = 189/223 (84.75%), Postives = 206/223 (92.38%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVI+ LEE GF+HDRFYIH DGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITR+EHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY+GFQKEVQKCLRNA Y KDRL DAGI AMLNELSSTVVFERP D+EF+R+WQLAC+GNIAHVVVMPNVTI+KLD FL+EL++KR  WF + K QP C+A+D+G  +
Sbjct:  209 KGAVDDLDLVIETLEECGFTHDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLRDAGISAMLNELSSTVVFERPVDDEFVRRWQLACQGNIAHVVVMPNVTIEKLDYFLDELIEKRNTWFLDKKVQPPCVAADIGSEN 431

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: B9H7Q8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_559359 PE=3 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 8.967e-109
Identity = 191/220 (86.82%), Postives = 205/220 (93.18%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVG 662
            KGAVDDLDLVIQ LEE+GFS DRFYIH DGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITR+EHI+ LSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY+GFQKEVQKCLRNA Y KDRL DAGI AMLNELSSTVVFERP DEEF+R+WQLAC+GNIAHVVVMP+VTI+KLD+FLNELV+KR  W+ +G  QP CIA+DVG
Sbjct:  244 KGAVDDLDLVIQTLEESGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHIDVLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLHDAGISAMLNELSSTVVFERPLDEEFVRRWQLACQGNIAHVVVMPSVTIEKLDDFLNELVEKRSIWYRDGGVQPPCIAADVG 463

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: A5BTI1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034634 PE=3 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 2.609e-108
Identity = 188/223 (84.30%), Postives = 205/223 (91.93%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVI+ LEE GF+HDRFYIH DGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITR+EHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY+GFQKEVQKCLRNA Y KDRL DAGI AMLNELSSTVVFERP D+EF+R+WQLAC+GNIAHVVVMPNVTI+KLD FL+ L++KR  WF + K QP C+A+D+G  +
Sbjct:  244 KGAVDDLDLVIETLEECGFTHDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLRDAGISAMLNELSSTVVFERPXDDEFVRRWQLACQGNIAHVVVMPNVTIEKLDYFLDXLIEKRNTWFLDKKVQPPCVAADIGSEN 466

[Close]

BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: B9GTK4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816223 PE=3 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 3.407e-108
Identity = 187/223 (83.86%), Postives = 207/223 (92.83%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVIQ LEE+GFS DRFYIH DGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITR+EHIN LS NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY+GFQKEVQKCLRNA+Y KDRL DAGI AMLNELSSTVVFERP DE+F+R+WQLAC+GNIAHVVVMP+VTI+KLD+F+NELV+KR  W+++ K +P CIA+D+G  +
Sbjct:  234 KGAVDDLDLVIQTLEESGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAYYLKDRLRDAGISAMLNELSSTVVFERPIDEDFVRRWQLACQGNIAHVVVMPSVTIEKLDDFVNELVEKRSTWYQDEKVRPPCIAADIGSQN 456

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: Q4H1G0_BETVU (Putative serine decarboxylase OS=Beta vulgaris GN=BvSDC1 PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 3.189e-106
Identity = 184/223 (82.51%), Postives = 203/223 (91.03%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVIQ LEE GF H+RFYIH DGALFGLM+PFVK+AP+VTFKKPIGSVSVSGHKFVGCPMPCGVQITR+EHIN LS NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNA Y KDRL + GI AMLNELSSTVVFERP DEEFIR+WQLAC+GNIAHVVVMPN+TI KL+ FL+ELV+KR  WF++G  +P C+ASD+G+ +
Sbjct:  258 KGAVDDLDLVIQTLEECGFPHNRFYIHCDGALFGLMLPFVKKAPQVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINTLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREVGISAMLNELSSTVVFERPLDEEFIRRWQLACQGNIAHVVVMPNITIDKLESFLDELVEKRSTWFKDGTNKPPCVASDIGQEN 480

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: Q6ESZ9_ORYSJ (Putative serine decarboxylase OS=Oryza sativa subsp. japonica GN=P0472F10.2 PE=3 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 9.279e-106
Identity = 187/223 (83.86%), Postives = 202/223 (90.58%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVI+ LEE GF  DRFYIH DGALFGLM+PFVK+APKV+FKKPIGSVSVSGHKFVGCPMPCGVQITRLEHIN LS NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNA Y KDRL +AGIGAMLNELSSTVVFERP DEEF+R+WQLAC+GNIAHVVVMP+VTI KLD FLNEL +KR  W+++G  QP C+A DVGE +
Sbjct:  253 KGAVDDLDLVIKTLEEGGFK-DRFYIHCDGALFGLMIPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINRLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLKEAGIGAMLNELSSTVVFERPKDEEFVRRWQLACEGNIAHVVVMPSVTIDKLDYFLNELTEKRATWYQDGSCQPPCLAKDVGEEN 474

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: A2X5T7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07573 PE=3 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 9.279e-106
Identity = 187/223 (83.86%), Postives = 202/223 (90.58%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVI+ LEE GF  DRFYIH DGALFGLM+PFVK+APKV+FKKPIGSVSVSGHKFVGCPMPCGVQITRLEHIN LS NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNA Y KDRL +AGIGAMLNELSSTVVFERP DEEF+R+WQLAC+GNIAHVVVMP+VTI KLD FLNEL +KR  W+++G  QP C+A DVGE +
Sbjct:  255 KGAVDDLDLVIKTLEEGGFK-DRFYIHCDGALFGLMIPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINRLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLKEAGIGAMLNELSSTVVFERPKDEEFVRRWQLACEGNIAHVVVMPSVTIDKLDYFLNELTEKRATWYQDGSCQPPCLAKDVGEEN 476

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BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Match: D7KNM9_ARALY (EMB1075 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_891351 PE=4 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 6.015e-105
Identity = 184/223 (82.51%), Postives = 202/223 (90.58%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVI+ LEE GFSHDRFYIH DGALFGLMMPFVKRAPKVTF KPIGSVSVSGHKFVGCPMPCGVQITR+EHI  LS NVEYLASRDATIMGSRNGHAP+FLWYTLNRKGY+GFQKEVQKCLRNA Y KDRL +AGI AMLNELSSTVVFERP DEEF+R+WQLAC+G+IAHVVVMP+VTI+KLD FL +LV+ R  W+E+G  QP C+AS+VG N+
Sbjct:  234 KGAVDDLDLVIKTLEECGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFNKPIGSVSVSGHKFVGCPMPCGVQITRMEHIKVLSNNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLCEAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGDIAHVVVMPSVTIEKLDNFLKDLVKHRSVWYEDGS-QPPCLASEVGTNN 455

[Close]

BLAST of Pisum_sativum_v1_Contig2839 vs. TAIR peptide
Match: AT1G43710.1 (| Symbols: emb1075 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr1:16486534-16488298 REVERSE LENGTH=482)

HSP 1 Score: 384.03 bits (985), Expect = 5.051e-107
Identity = 184/223 (82.51%), Postives = 203/223 (91.03%), Query Frame = 3

Query:    3 KGAVDDLDLVIQKLEEAGFSHDRFYIHVDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAFYSKDRLIDAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIQKLDEFLNELVQKRVAWFEEGKYQPYCIASDVGENS 671
            KGAVDDLDLVI+ LEE GFSHDRFYIH DGALFGLMMPFVKRAPKVTF KPIGSVSVSGHKFVGCPMPCGVQITR+EHI  LS NVEYLASRDATIMGSRNGHAP+FLWYTLNRKGY+GFQKEVQKCLRNA Y KDRL +AGI AMLNELSSTVVFERP DEEF+R+WQLAC+G+IAHVVVMP+VTI+KLD FL +LV+ R+ W+E+G  QP C+AS+VG N+
Sbjct:  254 KGAVDDLDLVIKTLEECGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFNKPIGSVSVSGHKFVGCPMPCGVQITRMEHIKVLSSNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGDIAHVVVMPSVTIEKLDNFLKDLVKHRLIWYEDGS-QPPCLASEVGTNN 475

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2839 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2839 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
DCHS_SOLLC	2.384e-71	56.05	Histidine decarboxylase OS=Solanum lycopersicum GN...	[more]
DCHS_VIBHB	3.475e-38	39.20	Histidine decarboxylase OS=Vibrio harveyi (strain ...	[more]
DCHS_VIBAN	7.741e-38	38.69	Histidine decarboxylase OS=Vibrio anguillarum GN=h...	[more]
DCHS_PSEE4	8.010e-35	36.18	Histidine decarboxylase OS=Pseudomonas entomophila...	[more]
DCHS_MORMO	8.010e-35	35.18	Histidine decarboxylase OS=Morganella morganii GN=...	[more]
DCHS_KLEPL	3.976e-34	33.67	Histidine decarboxylase OS=Klebsiella planticola G...	[more]
DCHS_PSEFL	8.857e-34	36.18	Histidine decarboxylase OS=Pseudomonas fluorescens...	[more]
DCHS_ACIBY	1.511e-33	34.85	Histidine decarboxylase OS=Acinetobacter baumannii...	[more]
DCHS_ACIBC	1.511e-33	34.85	Histidine decarboxylase OS=Acinetobacter baumannii...	[more]
DCHS_ACIB5	1.511e-33	34.85	Histidine decarboxylase OS=Acinetobacter baumannii...	[more]

BLAST of Pisum_sativum_v1_Contig2839 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FKB2_MEDTR	2.971e-120	94.62	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6T8E8_SOYBN	7.573e-116	88.79	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7SSC2_VITVI	8.967e-109	84.75	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9H7Q8_POPTR	8.967e-109	86.82	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BTI1_VITVI	2.609e-108	84.30	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9GTK4_POPTR	3.407e-108	83.86	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q4H1G0_BETVU	3.189e-106	82.51	Putative serine decarboxylase OS=Beta vulgaris GN=...	[more]
Q6ESZ9_ORYSJ	9.279e-106	83.86	Putative serine decarboxylase OS=Oryza sativa subs...	[more]
A2X5T7_ORYSI	9.279e-106	83.86	Putative uncharacterized protein OS=Oryza sativa s...	[more]
D7KNM9_ARALY	6.015e-105	82.51	EMB1075 OS=Arabidopsis lyrata subsp. lyrata GN=ARA...	[more]

BLAST of Pisum_sativum_v1_Contig2839 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G43710.1	5.051e-107	82.51	\| Symbols: emb1075 \| Pyridoxal phosphate (PLP)-dep...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002129	Pyridoxal phosphate-dependent decarboxylase	PANTHER	PTHR11999	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	coord: 1..207 score: 3.9e
IPR002129	Pyridoxal phosphate-dependent decarboxylase	PFAM	PF00282	Pyridoxal_deC	coord: 11..142 score: 3.9
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	3.40.640.10	no description	coord: 2..124 score: 1.2
IPR015424	Pyridoxal phosphate-dependent transferase, major domain	SUPERFAMILY	53383	PLP-dependent transferases	coord: 2..208 score: 9.7
IPR021115	Pyridoxal-phosphate binding site	PROSITE	PS00392	DDC_GAD_HDC_YDC	coord: 54..75 score
None	No IPR available	PANTHER	PTHR11999:SF4	GROUP II PLP DECARBOXYLASE	coord: 1..207 score: 3.9e

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2839 ID=Pisum_sativum_v1_Contig2839; Name=Pisum_sativum_v1_Contig2839; organism=Pisum sativum; type=contig; length=795bp
TGAAAGGAGCCGTGGATGATCTTGATCTGGTTATACAGAAACTTGAAGAA
GCTGGATTTTCACACGACAGGTTCTACATTCACGTTGATGGTGCATTGTT
TGGTCTCATGATGCCTTTTGTGAAACGAGCTCCAAAAGTAACTTTTAAGA
AGCCTATTGGAAGTGTCAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCC
ATGCCTTGTGGGGTGCAGATAACAAGATTGGAGCATATCAATGCTCTTTC
CAGAAATGTGGAATACCTTGCGTCTAGGGACGCCACAATCATGGGTAGTC
GAAATGGCCACGCTCCCATATTCCTTTGGTATACCTTGAACCGGAAAGGA
TACAGAGGCTTCCAGAAAGAAGTACAGAAATGCTTGCGAAATGCATTCTA
CTCCAAAGACCGCCTTATCGATGCTGGGATCGGTGCAATGCTTAACGAGC
TTAGCAGCACAGTTGTATTTGAACGGCCACACGATGAGGAATTTATCCGC
AAATGGCAGTTAGCATGCAAGGGGAACATCGCTCATGTGGTGGTGATGCC
AAATGTCACTATTCAGAAACTTGATGAATTTCTAAACGAGCTTGTGCAGA
AGCGTGTTGCTTGGTTTGAAGAGGGGAAGTATCAGCCTTATTGTATTGCA
TCAGATGTAGGTGAAAACAGTTGCCTATGTGCTCTGCATAAGTAATTGTA
GCATCTAATACAGTCTAGAGTTTACTATGGTAGTTGCTTTTTGGTATTTT
TGTGTGATGTATTTTTATAAGTACTTTGATGCACTTATATAACAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016831	carboxy-lyase activity
GO:0030170	pyridoxal phosphate binding
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0019752	carboxylic acid metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR002129	PyrdxlP-dep_de-COase
IPR015421	PyrdxlP-dep_Trfase_major
IPR015424	PyrdxlP-dep_Trfase
IPR021115	Pyridoxal-P_BS

Search form

Pisum_sativum_v1_Contig2839