Pisum_sativum_v1_Contig2841

Contig Overview
NamePisum_sativum_v1_Contig2841
Unique NamePisum_sativum_v1_Contig2841
Typecontig
OrganismPisum sativum (pea)
Sequence length509
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD860438ESTCD860438:1..510 -Pisum sativum unigene v1n/a
GH720106ESTGH720106:125..506 +Pisum sativum unigene v1n/a
CD860409ESTCD860409:132..509 +Pisum sativum unigene v1n/a
CD860567ESTCD860567:127..509 +Pisum sativum unigene v1n/a
CD860553ESTCD860553:127..507 -Pisum sativum unigene v1n/a
AM162169ESTAM162169:132..510 -Pisum sativum unigene v1n/a
CD859439ESTCD859439:174..508 +Pisum sativum unigene v1n/a
CD859380ESTCD859380:166..505 +Pisum sativum unigene v1n/a
CD860502ESTCD860502:137..507 -Pisum sativum unigene v1n/a
CD860304ESTCD860304:132..509 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860438CD860438Pisum sativumEST
GH720106GH720106Pisum sativumEST
CD860409CD860409Pisum sativumEST
CD860567CD860567Pisum sativumEST
CD860553CD860553Pisum sativumEST
AM162169AM162169Pisum sativumEST
CD859439CD859439Pisum sativumEST
CD859380CD859380Pisum sativumEST
CD860502CD860502Pisum sativumEST
CD860304CD860304Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2841 vs. TrEMBL
Match: Q9M445_CICAR (Putative uncharacterized protein (Fragment) OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.610e-20
Identity = 48/72 (66.67%), Postives = 53/72 (73.61%), Query Frame = 3 
Query:  207 NDTGNNGTIDAFNNQGGHQDYGEADIKTGAHITNGGYTNLHNNGTKHAFNNSYGGTQNFGKATINTGARIGN 422
            N  GNNGT+DAFNN+ G QDY EA+  TGA I  G Y    NNGTK AFNNS+GGTQ FGKA  NTGA+IGN
Sbjct:   12 NYGGNNGTVDAFNNKLGTQDYDEAEFNTGAEIKKGSYPTHSNNGTKKAFNNSWGGTQKFGKAKFNTGAKIGN 83
[Close]
BLAST of Pisum_sativum_v1_Contig2841 vs. TrEMBL
Match: B7FH39_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.993e-8
Identity = 41/69 (59.42%), Postives = 45/69 (65.22%), Query Frame = 1 
Query:  250 RVAIKIMVRLTSKLVHILPMEVILIFITMEPSMHSTTHMEELRILERPRLTLALGLETKLHRSFMGASQ 456
            RVA KI +RL SKLV  LP  V L+ +TMEP M STT MEELR LERP  TL   LE K     +GASQ
Sbjct:   10 RVANKISLRLNSKLVQKLP-RVTLLIVTMEPKMLSTTQMEELRNLERPSSTLGHILEIKP----LGASQ 73
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2841 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
Q9M445_CICAR2.610e-2066.67Putative uncharacterized protein (Fragment) OS=Cic... [more]
B7FH39_MEDTR2.993e-859.42Putative uncharacterized protein OS=Medicago trunc... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 15..28
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2841 ID=Pisum_sativum_v1_Contig2841; Name=Pisum_sativum_v1_Contig2841; organism=Pisum sativum; type=contig; length=509bp
GCGTGGTCGCGGCCGAGGTTAGAAATTGTCTCGAGACAACGAATCAAAAT
CAGCAGCCACCTCCTTTTGCCACACCGAGGCCTTAGCTGTGGGAGTATTA
CCTGAAAGAAACAAACACAAAGCATACAATACAAGAAGAGATATTATTGC
ATAAACTTTCCATAACTATGGCTGGCTTATGGAGGAACAATTTCTGCCAA
TGGAGCAACGACACTGGAAACAATGGAACCATTGACGCCTTTAACAACCA
GGGTGGCCATCAAGATTATGGTGAGGCTGACATCAAAACTGGTGCACATA
TTACCAATGGAGGTTATACTAATCTTCATAACAATGGAACCAAGCATGCA
TTCAACAACTCATATGGAGGAACTCAGAATTTTGGAAAGGCCACGATTAA
CACTGGCGCTAGGATTGGAAACTAAACTCCATAGGAGCTTCATGGGAGCT
TCACAAATACATATATAGGTATAAACAAATAACAATAACATAAATTGTGT
ATTGGGTGT
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