Pisum_sativum_v1_Contig2849

Contig Overview
NamePisum_sativum_v1_Contig2849
Unique NamePisum_sativum_v1_Contig2849
Typecontig
OrganismPisum sativum (pea)
Sequence length563
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD859402ESTCD859402:1..330 +Pisum sativum unigene v1n/a
CD859493ESTCD859493:1..451 +Pisum sativum unigene v1n/a
CD859440ESTCD859440:8..470 -Pisum sativum unigene v1n/a
CD860396ESTCD860396:1..534 -Pisum sativum unigene v1n/a
CD859309ESTCD859309:4..489 +Pisum sativum unigene v1n/a
CD859533ESTCD859533:4..539 +Pisum sativum unigene v1n/a
CD859547ESTCD859547:2..538 -Pisum sativum unigene v1n/a
CD859529ESTCD859529:43..528 -Pisum sativum unigene v1n/a
CD859456ESTCD859456:4..533 +Pisum sativum unigene v1n/a
CD859406ESTCD859406:4..531 +Pisum sativum unigene v1n/a
CD859361ESTCD859361:1..563 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD859402CD859402Pisum sativumEST
CD859493CD859493Pisum sativumEST
CD859440CD859440Pisum sativumEST
CD860396CD860396Pisum sativumEST
CD859309CD859309Pisum sativumEST
CD859533CD859533Pisum sativumEST
CD859547CD859547Pisum sativumEST
CD859529CD859529Pisum sativumEST
CD859456CD859456Pisum sativumEST
CD859406CD859406Pisum sativumEST
CD859361CD859361Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: B9RKU9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1053560 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.515e-13
Identity = 59/171 (34.50%), Postives = 84/171 (49.12%), Query Frame = -1
Query:   33 STSCCLRLYPTPTSNASLIP-----TNPPHLSLEKNKGSWKRPCVVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAV---RSDSRTAPPLSLSSVKLKTIREDCFSM 521
            +TSCCL +   P ++AS +P     T P   +       W+  CV +G+A    IIGL+ +N V                 T      +       + +     +WS KRMCP W+ N+ LETIVPENLPRP++RRR+EA    + D   AP   + SVK   I ++CF+M
Sbjct:    4 TTSCCLNMNIPPPTSASSLPSSSSTTKPTAQASWFKNEKWRSQCV-LGMACM--IIGLEMDNLVNEE--------------TNLAMAAENSSSVVELKVKPKTRRWSDKRMCPPWRLNS-LETIVPENLPRPSARRRWEATGYSKIDPAPAPARKV-SVKSIMIMDNCFTM 155          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: A5BJF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004448 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.229e-12
Identity = 59/169 (34.91%), Postives = 84/169 (49.70%), Query Frame = -1
Query:   33 STSCCLRLYPTPTSNA---SLIPTNPPHLSLEKNKGSWKRPCVVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGG---VAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSVKLKTIREDCFSM 521
            S  CCL L P P+ ++   S   T    +S  + + S K  C+V    +C  II L+ +N +                       G+     + + L+G    V +WS KRMCP WQ N+ LETIVPENLPRP++RRR+E+V   S TAP + +  +     + DCFSM
Sbjct:    4 SAGCCLNLSPPPSGSSPRSSRSSTKTDQVSWPRKENSLKSKCLV--GLTCM-IISLEMSNLM----------------------SGEGLAIAQDLQLIGERKEVTRWSDKRMCPPWQLNS-LETIVPENLPRPSTRRRWESV-GHSTTAPAVKI--LFRAHTKSDCFSM 143          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: B9H9Q9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819574 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.358e-11
Identity = 55/165 (33.33%), Postives = 80/165 (48.48%), Query Frame = -1
Query:   33 TSCCLRLYPTPTSNASLIP---TNPPHLSLEKNKGSWKRPCVVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSVKLKTIREDCFSM 518
            T+C L L  +P  + S +P   T    ++  KN+  W+  CV+   A+C  IIGL+    ++                 M+  M    +  E++       +WS KRMCP W  N+ LETIVPENLPRP++ RR+E VR     AP + +  +K       CFSM
Sbjct:    5 TTCRLNL--SPPGSGSTLPSSSTKNSQVAWFKNE-KWRNRCVL--GAACM-IIGLEMGGGLVGGEDL-----------AMAREMQVAVESKENL----NGPRWSDKRMCPPWSRNS-LETIVPENLPRPSAHRRWEEVRFSKNNAPAVKVIVIKRS---NGCFSM 144          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: C5YW28_SORBI (Putative uncharacterized protein Sb09g029300 OS=Sorghum bicolor GN=Sb09g029300 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.661e-9
Identity = 49/172 (28.49%), Postives = 71/172 (41.28%), Query Frame = -1
Query:   33 STSCCLRLYPTPTSNASLIPTNPPHLSLEKNKGSW----KRPCVVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSV-----KLKTIREDCFSM 521
            S SC LR  P P   AS   T P     +     W    +R CV     +   +IG      V+++                +                    +WS +R CP W+ N+ LE IVPENLPRP++RRR+  V+   R AP L   +V      L++  +DCF++
Sbjct:    5 SISCSLRP-PAPVREASARLTPPQPSPPKTTATPWADGLRRACVAAAATAACVVIGTAGGGDVVAASMPRDTPVLAVDARPAA-----------------AAPRWSDRRECPPWRANS-LENIVPENLPRPSARRRFNTVKRAPRKAPALGRQAVAPPFLALRSGVDDCFTL 157          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: Q94CB8_ARATH (Putative uncharacterized protein At2g25625 OS=Arabidopsis thaliana GN=At2g25625 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 8.242e-9
Identity = 56/174 (32.18%), Postives = 77/174 (44.25%), Query Frame = -1
Query:   33 SCCLRLYPTPTSNASLIPTNPPHLSLEKNKGSW---------KRPC-VVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVA---KWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSVKLKTIREDCFSM 515
            SCCL L P  +++A  + +    L    +K SW         K  C  V+GVA+   I G+Q N+                    +  S  +E        +  GV    +WS KR CP W  N+ LETIVPENLPRP++ RR E        APP+ +  V  +  R  CFS+
Sbjct:    6 SCCLNLPPLDSNSAQSLAS----LLKTTSKISWRTENETEPRKNKCSFVLGVAATVVIGGIQINDVA-------------SVEAAVVKSPVEE--------MAAGVVPPRRWSDKRTCPPWLENS-LETIVPENLPRPSAHRRLELAGLAKGDAPPVGV--VMTRVNRGGCFSV 151          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: B6SRA9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 8.242e-9
Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = -1
Query:   33 VGGVAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSV------KLKTIREDCFSM 239
            V    +WS +R CP W+ N+ LE ++PENLPRP++RRR+ +V+   R AP L   +V       L++  +DCF++
Sbjct:   70 VAAAPRWSDRRECPPWRANS-LENVMPENLPRPSARRRFNSVKRAPRKAPALGPQAVAPSPFLALRSGMDDCFTL 143          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: Q8S8K8_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g25625 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.836e-8
Identity = 56/172 (32.56%), Postives = 78/172 (45.35%), Query Frame = -1
Query:   33 SCCLRLYPTPTSNA----SLIPTNPPHLSLEKNKGSW---KRPC-VVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVA---KWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSVKLKTIREDCFSM 515
            SCCL L P  +++A    SL+ T    +S  + +      K  C  V+GVA+   I G+Q N+                    +  S  +E        +  GV    +WS KR CP W  N+ LETIVPENLPRP++ RR E        APP+ +  V  +  R  CFS+
Sbjct:    6 SCCLNLPPLDSNSAQSLASLLKTTSK-ISCRRTENETEPRKNKCSFVLGVAATVVIGGIQINDVA-------------SVEAAVVKSPVEE--------MAAGVVPPRRWSDKRTCPPWLENS-LETIVPENLPRPSAHRRLELAGLAKGDAPPVGV--VMTRVNRGGCFSV 152          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: D7LL69_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901208 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.398e-8
Identity = 51/168 (30.36%), Postives = 77/168 (45.83%), Query Frame = -1
Query:   33 SCCLRLYPTPTSNASLIPT---NPPHLSLEKNKGSWK----RPCVVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSVKLKTIREDCFSM 515
            SCCL L P  +++A  +P+       +S ++ +   K    +  +V GVA+   I  +Q N+                  V   +++  +    E    V    +WS KR CP W  N+ LETIVPENLPRP++ RR E        APP  + +V  +  R  CFS+
Sbjct:    6 SCCLNLPPLYSNSAQSLPSLLKTTSKISCKRTEDETKPRKNKCSLVFGVAATVIIGAIQIND------------------VASVDAVVVKSPVEEMAAGVVPPRRWSDKRTCPPWLENS-LETIVPENLPRPSAHRRLELAGLAKGDAPP--VGAVVTRVNRAGCFSV 152          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: Q6F369_ORYSJ (Os05g0575000 protein OS=Oryza sativa subsp. japonica GN=OJ1268_B08.13 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.030e-7
Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = -1
Query:   72 GVAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAV--RSDSRTAPPLSLSS 233
            G A+WS +R CP W+ N+ LE IVPENLPRP++RRR+ ++   + + +APP + +S
Sbjct:   67 GPARWSDRRQCPPWRANS-LENIVPENLPRPSARRRFNSITAAAAAESAPPPASAS 121          
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Match: A2Y7S1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21090 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.030e-7
Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = -1
Query:   72 GVAKWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAV--RSDSRTAPPLSLSS 233
            G A+WS +R CP W+ N+ LE IVPENLPRP++RRR+ ++   + + +APP + +S
Sbjct:   67 GPARWSDRRQCPPWRANS-LENIVPENLPRPSARRRFNSITAAAAAESAPPPASAS 121          
BLAST of Pisum_sativum_v1_Contig2849 vs. TAIR peptide
Match: AT2G25625.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:10906562-10907099 FORWARD LENGTH=151)

HSP 1 Score: 63.929 bits (154), Expect = 6.565e-11
Identity = 56/174 (32.18%), Postives = 77/174 (44.25%), Query Frame = -1
Query:   33 SCCLRLYPTPTSNASLIPTNPPHLSLEKNKGSW---------KRPC-VVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVA---KWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSVKLKTIREDCFSM 515
            SCCL L P  +++A  + +    L    +K SW         K  C  V+GVA+   I G+Q N+                    +  S  +E        +  GV    +WS KR CP W  N+ LETIVPENLPRP++ RR E        APP+ +  V  +  R  CFS+
Sbjct:    6 SCCLNLPPLDSNSAQSLAS----LLKTTSKISWRTENETEPRKNKCSFVLGVAATVVIGGIQINDVA-------------SVEAAVVKSPVEE--------MAAGVVPPRRWSDKRTCPPWLENS-LETIVPENLPRPSAHRRLELAGLAKGDAPPVGV--VMTRVNRGGCFSV 151          
BLAST of Pisum_sativum_v1_Contig2849 vs. TAIR peptide
Match: AT2G25625.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:10906562-10907099 FORWARD LENGTH=152)

HSP 1 Score: 62.7734 bits (151), Expect = 1.463e-10
Identity = 56/172 (32.56%), Postives = 78/172 (45.35%), Query Frame = -1
Query:   33 SCCLRLYPTPTSNA----SLIPTNPPHLSLEKNKGSW---KRPC-VVIGVASCFTIIGLQFNNSVISSHXXXXXXXXXXXXVTMSNSMGDEYDEHEHVVLVGGVA---KWSQKRMCPSWQGNNPLETIVPENLPRPASRRRYEAVRSDSRTAPPLSLSSVKLKTIREDCFSM 515
            SCCL L P  +++A    SL+ T    +S  + +      K  C  V+GVA+   I G+Q N+                    +  S  +E        +  GV    +WS KR CP W  N+ LETIVPENLPRP++ RR E        APP+ +  V  +  R  CFS+
Sbjct:    6 SCCLNLPPLDSNSAQSLASLLKTTSK-ISCRRTENETEPRKNKCSFVLGVAATVVIGGIQINDVA-------------SVEAAVVKSPVEE--------MAAGVVPPRRWSDKRTCPPWLENS-LETIVPENLPRPSAHRRLELAGLAKGDAPPVGV--VMTRVNRGGCFSV 152          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2849 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RKU9_RICCO5.515e-1334.50Putative uncharacterized protein OS=Ricinus commun... [more]
A5BJF3_VITVI1.229e-1234.91Putative uncharacterized protein OS=Vitis vinifera... [more]
B9H9Q9_POPTR1.358e-1133.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5YW28_SORBI1.661e-928.49Putative uncharacterized protein Sb09g029300 OS=So... [more]
Q94CB8_ARATH8.242e-932.18Putative uncharacterized protein At2g25625 OS=Arab... [more]
B6SRA9_MAIZE8.242e-940.00Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q8S8K8_ARATH1.836e-832.56Expressed protein OS=Arabidopsis thaliana GN=At2g2... [more]
D7LL69_ARALY2.398e-830.36Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q6F369_ORYSJ2.030e-748.21Os05g0575000 protein OS=Oryza sativa subsp. japoni... [more]
A2Y7S1_ORYSI2.030e-748.21Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of Pisum_sativum_v1_Contig2849 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G25625.26.565e-1132.18| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT2G25625.11.463e-1032.56| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 68..83
score: NAcoord: 90..102
score
NoneNo IPR availableSEGsegsegcoord: 78..90
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2849 ID=Pisum_sativum_v1_Contig2849; Name=Pisum_sativum_v1_Contig2849; organism=Pisum sativum; type=contig; length=563bp
CAATTTATTACTGATTGAGTAATTTAATTTCACATGGAGAAACAATCCTC
CCTAATGGTTTTAAGTTTGACGGAAGAAAGCGAGAGCGGCGGCGCAGTCC
TGGAGTCGGAGCGAACCGCCTCGTATCGCCGTCGTGATGCTGGCCGTGGA
AGATTCTCCGGCACGATGGTTTCAAGCGGATTATTTCCTTGCCACGACGG
ACACATCCTTTTCTGGCTCCATTTAGCCACACCACCAACCAAAACCACAT
GCTCATGCTCATCATATTCATCACCCATTGAATTTGACATGGTCACAACC
ATGATCTCCTCCTTAGGCACAACAACAACTTCATGCGATGATATCACTGA
ATTGTTGAATTGTAGTCCAATTATAGTGAAGCACGAAGCTACTCCTATCA
CAACGCATGGCCTTTTCCAGCTTCCTTTGTTTTTCTCCAAGGAAAGATGA
GGTGGGTTTGTGGGGATGAGGGAAGCGTTTGAAGTTGGTGTAGGGTAAAG
ACGGAGACAGCAACTGGTTGATCTCATCTTTTTCTTCCCTCTCGACCTCG
GCCGCGACCACGC
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