Pisum_sativum_v1_Contig2865

Contig Overview


Name	Pisum_sativum_v1_Contig2865
Unique Name	Pisum_sativum_v1_Contig2865
Type	contig
Organism	Pisum sativum (pea)
Sequence length	498

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CD860278	EST	CD860278:1..498 -
FG534248	EST	FG534248:30..495 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD860278	CD860278	Pisum sativum	EST
FG534248	FG534248	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL35_EUPES (60S ribosomal protein L35 OS=Euphorbia esula GN=RPL35 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 5.176e-54
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR KTK +LLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALRE YKNKK+LPLDLRPKKTRAIRRRLTK+Q SLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEMYFPMRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL354_ARATH (60S ribosomal protein L35-4 OS=Arabidopsis thaliana GN=RPL35D PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 4.844e-52
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR+K+K DL NQLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL351_ARATH (60S ribosomal protein L35-1 OS=Arabidopsis thaliana GN=RPL35A PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 8.263e-52
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR K+K DL NQLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL352_ARATH (60S ribosomal protein L35-2 OS=Arabidopsis thaliana GN=RPL35B PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.404e-51
Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR K+K DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL353_ARATH (60S ribosomal protein L35-3 OS=Arabidopsis thaliana GN=RPL35C PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.472e-50
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR+K+K DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKK++YFP+RKYAIK
Sbjct:    3 RIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL35_RAT (60S ribosomal protein L35 OS=Rattus norvegicus GN=Rpl35 PE=1 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 3.048e-38
Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIKA 364
            +IK  +LR K K +LL QL DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK  LR+ YK KKY PLDLRPKKTRA+RRRLTK++  LKT+++++KE  +PLRKYA+KA
Sbjct:    3 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYAVKA 123

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL35_MOUSE (60S ribosomal protein L35 OS=Mus musculus GN=Rpl35 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.048e-38
Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIKA 364
            +IK  +LR K K +LL QL DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK  LR+ YK KKY PLDLRPKKTRA+RRRLTK++  LKT+++++KE  +PLRKYA+KA
Sbjct:    3 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYAVKA 123

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL35_BOVIN (60S ribosomal protein L35 OS=Bos taurus GN=RPL35 PE=2 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 5.200e-38
Identity = 80/121 (66.12%), Postives = 101/121 (83.47%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIKA 364
            +IK  +LR K K +LL QL+DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK  LR+ YK KKY PLDLRPKKTRA+RRRL K++ +LKT+++++KE  +PLRKYA+KA
Sbjct:    3 KIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL35_HUMAN (60S ribosomal protein L35 OS=Homo sapiens GN=RPL35 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 8.869e-38
Identity = 80/121 (66.12%), Postives = 100/121 (82.64%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIKA 364
            +IK  +LR K K +LL QL DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK  LR+ YK KKY PLDLRPKKTRA+RRRL K++ +LKT+++++KE  +PLRKYA+KA
Sbjct:    3 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Match: RL35_PIG (60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 PE=2 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 1.513e-37
Identity = 79/121 (65.29%), Postives = 101/121 (83.47%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIKA 364
            +IK  +LR K K +LL QL+DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK  LR+ YK KKY PLDLRPKKTRA+RRRL K++ +LKT+++++KE  +PLRK+A+KA
Sbjct:    3 KIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKFAVKA 123

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: C6SW56_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.139e-55
Identity = 113/120 (94.17%), Postives = 117/120 (97.50%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKVYELR KTK DLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRL+IAQVLTVISQKQKAALR+ YKNKKYLPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFPLRKYAIK
Sbjct:    3 RIKVYELRQKTKADLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLNIAQVLTVISQKQKAALRDAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: C6T078_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 5.355e-55
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKVYELRNKTK +LLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALRE YK KKYLPLDLRPKKTRAIRRRLTK+Q SLKTEREKKKE+YFPLRKYAIK
Sbjct:    3 RIKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQVSLKTEREKKKELYFPLRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: Q53U38_SOLLC (Similar to 60S ribosomal protein L35 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.938e-53
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELRNK+K +LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALRE YKNKKYLPLDLRPKKTRAIR+RLTK+QASLKTEREKKKE+YFPLRKYAIK
Sbjct:    3 RIKVHELRNKSKTELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKLALREAYKNKKYLPLDLRPKKTRAIRKRLTKHQASLKTEREKKKELYFPLRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: B7FN27_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.012e-53
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 2

Query:    5 IKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIKA 364
            +KVYELR KTK DLLNQLKDLKAELA LRVAKVTGGAPNKLSKIKVVRL+IAQVLTVISQKQK ALRE YK+KKYLPLDLRPKKTRAIRRRLTK+Q+SLKTEREKKKEIYFP+RKYAIKA
Sbjct:    4 VKVYELRQKTKQDLLNQLKDLKAELAPLRVAKVTGGAPNKLSKIKVVRLNIAQVLTVISQKQKTALREAYKSKKYLPLDLRPKKTRAIRRRLTKHQSSLKTEREKKKEIYFPVRKYAIKA 123

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: Q45KX4_RHEAU (Putative 60S ribosomal protein L35 OS=Rheum australe PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.458e-52
Identity = 110/120 (91.67%), Postives = 113/120 (94.17%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR K K DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRL IAQVLTVISQKQKAALRE YKNKKYLPLDLRPKKTRAIRRRLTK+QASLKTEREKK+EIYFP RKYAIK
Sbjct:    3 RIKVHELRQKAKVDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLQIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREIYFPTRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: D7TRP8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_317.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005972001 PE=4 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.488e-52
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR KTK DLL QLK+LKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALRE YKNKKYLPLDLRPKKTRAIR+RLTK+Q SLKTEREKK+E+YFP+RKYAIK
Sbjct:   54 RIKVHELRGKTKADLLVQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRKRLTKHQVSLKTEREKKREMYFPMRKYAIK 173

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: A9NQ49_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.488e-52
Identity = 106/120 (88.33%), Postives = 116/120 (96.67%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELRNK+K +LLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQ Q++ALRE YK KKYLPLDLRPKKTRAIRRRLTK+QASLKTER+KKKE+YFP+RKYA+K
Sbjct:    3 RIKVHELRNKSKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQNQRSALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPMRKYAVK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: A9PBI5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_724828 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.243e-52
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR K+K DLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKA LRE YKNKK+LPLDLRPKKTRAIRRRLTK+Q SLKTEREKK+EIYFP+RKYAIK
Sbjct:    3 RIKVHELRQKSKTDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAVLREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKREIYFPMRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: B9SYM9_RICCO (60S ribosomal protein L35, putative OS=Ricinus communis GN=RCOM_0787580 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 5.542e-52
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELRNK+K +LL+QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALRE YKNKK LPLDLRPKKTRAIRRRLTK+ ASLKTEREKK+E+YFP+RKYAIK
Sbjct:    3 RIKVHELRNKSKTELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKLLPLDLRPKKTRAIRRRLTKHLASLKTEREKKREMYFPVRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Match: B3TLM6_ELAGV (60S ribosomal protein L35 OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 9.453e-52
Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIKA 364
            RIKV+ELR K+K DLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIA+VLTVISQKQK  LRE YK KKY PLDLRPKKTRAIRRRLTK+QASLKTER+KKKE+YFP+RKYAIKA
Sbjct:    3 RIKVHELRGKSKADLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIARVLTVISQKQKEVLREAYKKKKYQPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPMRKYAIKA 123

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide
Match: AT5G02610.1 (| Symbols: | Ribosomal L29 family protein | chr5:587611-588547 FORWARD LENGTH=123)

HSP 1 Score: 203.371 bits (516), Expect = 5.385e-53
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR+K+K DL NQLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide
Match: AT3G09500.1 (| Symbols: | Ribosomal L29 family protein | chr3:2917047-2917895 FORWARD LENGTH=123)

HSP 1 Score: 202.601 bits (514), Expect = 9.185e-53
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR K+K DL NQLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide
Match: AT2G39390.1 (| Symbols: | Ribosomal L29 family protein | chr2:16450803-16451762 REVERSE LENGTH=123)

HSP 1 Score: 201.06 bits (510), Expect = 2.672e-52
Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR K+K DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide
Match: AT3G55170.2 (| Symbols: | Ribosomal L29 family protein | chr3:20453136-20454293 REVERSE LENGTH=123)

HSP 1 Score: 197.208 bits (500), Expect = 3.859e-51
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR+K+K DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKK++YFP+RKYAIK
Sbjct:    3 RIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide
Match: AT3G55170.1 (| Symbols: | Ribosomal L29 family protein | chr3:20453136-20454293 REVERSE LENGTH=123)

HSP 1 Score: 197.208 bits (500), Expect = 3.859e-51
Identity = 103/120 (85.83%), Postives = 112/120 (93.33%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR+K+K DL  QLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKK++YFP+RKYAIK
Sbjct:    3 RIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAIK 122

[Close]

BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide
Match: AT5G02610.2 (| Symbols: | Ribosomal L29 family protein | chr5:587611-588547 FORWARD LENGTH=146)

HSP 1 Score: 190.274 bits (482), Expect = 4.717e-49
Identity = 106/143 (74.13%), Postives = 114/143 (79.72%), Query Frame = 2

Query:    2 RIKVYELRNKTKPDLLNQLKDLKAELALLRVAKVTGGAPNKLSKI-----------------------KVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKNQASLKTEREKKKEIYFPLRKYAIK 361
            RIKV+ELR+K+K DL NQLK+ KAELALLRVAKVTGGAPNKLSKI                       KVVR SIAQVLTVISQKQK+ALRE YKNKK LPLDLRPKKTRAIRRRLTK+QASLKTEREKKKE+YFP+RKYAIK
Sbjct:    3 RIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIRMDVDLAYDSNMYLRSIKFGPCIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYAIK 145

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2865 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL35_EUPES	5.176e-54	90.83	60S ribosomal protein L35 OS=Euphorbia esula GN=RP...	[more]
RL354_ARATH	4.844e-52	88.33	60S ribosomal protein L35-4 OS=Arabidopsis thalian...	[more]
RL351_ARATH	8.263e-52	88.33	60S ribosomal protein L35-1 OS=Arabidopsis thalian...	[more]
RL352_ARATH	2.404e-51	87.50	60S ribosomal protein L35-2 OS=Arabidopsis thalian...	[more]
RL353_ARATH	3.472e-50	85.83	60S ribosomal protein L35-3 OS=Arabidopsis thalian...	[more]
RL35_RAT	3.048e-38	66.94	60S ribosomal protein L35 OS=Rattus norvegicus GN=...	[more]
RL35_MOUSE	3.048e-38	66.94	60S ribosomal protein L35 OS=Mus musculus GN=Rpl35...	[more]
RL35_BOVIN	5.200e-38	66.12	60S ribosomal protein L35 OS=Bos taurus GN=RPL35 P...	[more]
RL35_HUMAN	8.869e-38	66.12	60S ribosomal protein L35 OS=Homo sapiens GN=RPL35...	[more]
RL35_PIG	1.513e-37	65.29	60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 P...	[more]

BLAST of Pisum_sativum_v1_Contig2865 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SW56_SOYBN	3.139e-55	94.17	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T078_SOYBN	5.355e-55	94.17	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q53U38_SOLLC	2.938e-53	91.67	Similar to 60S ribosomal protein L35 OS=Solanum ly...	[more]
B7FN27_MEDTR	5.012e-53	90.83	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q45KX4_RHEAU	1.458e-52	91.67	Putative 60S ribosomal protein L35 OS=Rheum austra...	[more]
D7TRP8_VITVI	2.488e-52	90.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9NQ49_PICSI	2.488e-52	88.33	Putative uncharacterized protein OS=Picea sitchens...	[more]
A9PBI5_POPTR	4.243e-52	90.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SYM9_RICCO	5.542e-52	90.00	60S ribosomal protein L35, putative OS=Ricinus com...	[more]
B3TLM6_ELAGV	9.453e-52	88.43	60S ribosomal protein L35 OS=Elaeis guineensis var...	[more]

BLAST of Pisum_sativum_v1_Contig2865 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT5G02610.1	5.385e-53	88.33	\| Symbols: \| Ribosomal L29 family protein \| chr5...	[more]
AT3G09500.1	9.185e-53	88.33	\| Symbols: \| Ribosomal L29 family protein \| chr3...	[more]
AT2G39390.1	2.672e-52	87.50	\| Symbols: \| Ribosomal L29 family protein \| chr2...	[more]
AT3G55170.2	3.859e-51	85.83	\| Symbols: \| Ribosomal L29 family protein \| chr3...	[more]
AT3G55170.1	3.859e-51	85.83	\| Symbols: \| Ribosomal L29 family protein \| chr3...	[more]
AT5G02610.2	4.717e-49	74.13	\| Symbols: \| Ribosomal L29 family protein \| chr5...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001854	Ribosomal protein L29	GENE3D	1.10.287.310	no description	coord: 2..68 score: 1.1
IPR001854	Ribosomal protein L29	PFAM	PF00831	Ribosomal_L29	coord: 5..62 score: 3.6
IPR001854	Ribosomal protein L29	TIGRFAMs	TIGR00012	L29: ribosomal protein L29	coord: 6..62 score: 2.3
IPR001854	Ribosomal protein L29	SUPERFAMILY	46561	Ribosomal protein L29 (L29p)	coord: 2..63 score: 2.5
None	No IPR available	PANTHER	PTHR13872	60S RIBOSOMAL PROTEIN L35	coord: 72..121 score: 8.2
None	No IPR available	SEG	seg	seg	coord: 63..83 score
None	No IPR available	SEG	seg	seg	coord: 5..17 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2865 ID=Pisum_sativum_v1_Contig2865; Name=Pisum_sativum_v1_Contig2865; organism=Pisum sativum; type=contig; length=498bp
GAGGATTAAGGTGTACGAGTTGAGGAACAAAACCAAACCGGATTTGCTGA
ACCAGCTGAAGGATCTGAAGGCGGAGCTTGCTTTGCTCCGAGTGGCGAAA
GTCACCGGCGGCGCACCGAATAAGCTATCCAAAATTAAAGTTGTTAGGCT
TTCGATAGCACAAGTGTTGACAGTGATTTCACAGAAGCAGAAAGCTGCAC
TTAGAGAAGTATACAAGAATAAGAAGTATTTGCCACTCGATCTTCGTCCC
AAGAAGACCCGTGCCATTCGAAGACGGCTTACCAAAAATCAGGCATCGTT
GAAGACAGAGCGAGAGAAGAAGAAGGAGATATACTTTCCATTAAGAAAGT
ATGCAATCAAAGCTTAGGCTAGGATTGTTTTCTAGTTGCATTTGTAGACC
TTTTATTTGAATTATTGGAACTTTAAGGTTGCCTAATTTGTTTGTTACTG
TATCTGCAATCCAATTTTTGTTCTAGTTGATTTTCTGGTTTTCATTAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001854	Ribosomal_uL29

Search form

Pisum_sativum_v1_Contig2865