Pisum_sativum_v1_Contig2871

Contig Overview


Name	Pisum_sativum_v1_Contig2871
Unique Name	Pisum_sativum_v1_Contig2871
Type	contig
Organism	Pisum sativum (pea)
Sequence length	1006

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CD860241	EST	CD860241:1..605 -	Pisum sativum unigene v1	n/a
FG530641	EST	FG530641:328..1006 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD860241	CD860241	Pisum sativum	EST
FG530641	FG530641	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2)

HSP 1 Score: 328.561 bits (841), Expect = 3.646e-89
Identity = 170/230 (73.91%), Postives = 190/230 (82.61%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGG--EGNLLGQMAGGM--PQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGG+WDR+TV+ ALRAAFNNPERAVEYLY+GIPE+AE P V++                          +SGPNANPLDLFPQGLPN+G G  GAG+LDFLRNSQQFQALRAMVQANPQ+LQPMLQELGKQNP+LMRLI+DHQADFLRLINEP+EGG   GNLLGQMA GM  PQA+ VT EER+AIERLEAMGF+RA+VLEV+FACNKNEELAANYLLDHMHEF+E
Sbjct:  195 LDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVAR----PPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVG-GNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 419

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BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 2.613e-87
Identity = 166/227 (73.13%), Postives = 185/227 (81.50%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDEQ 682
            LDMGGGSWDRDTV+RALRAAFNNPERAVEYLYSGIP +AE P V+Q                          + GPNANPL+LFPQG+P   AGA GAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP L+RLI++HQADFLRLINEP+E GE N++ Q+   MPQAVTVTPEER+AIERLE MGFDRA+VLEV+FACNKNEELAANYLLDHMHEF++Q
Sbjct:  156 LDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPA--AATGGPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVE-GEENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFEDQ 378

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BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 3.663e-73
Identity = 140/231 (60.61%), Postives = 170/231 (73.59%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEG-GEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDEQ*SP 691
            L+MGGG WDRD V+ AL AAFNNPERAVEYLYSG+PE+ + P    V                       + SSGPNA+PLDLFPQ LPN    AAG G+LD LRN+ QF+ L ++VQANPQILQP+LQELGKQNP +++LI+++QA+FL LINEP EG  E NLL Q    MPQ + VTPEE +AI RLEAMGFDRA+VL+V+FACNK+E+LAANYLLDHM+EFD++  P
Sbjct:  166 LEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIP----VPPPSIQPANPTQASQATQPAAPSILSSGPNASPLDLFPQALPNASTDAAGLGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDDEGPP 392

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 1.395e-64
Identity = 126/228 (55.26%), Postives = 163/228 (71.49%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEG--GEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++MGGGSWD++TV RALRAA+NNPERAV+YLYSGIP+ AE                                S GPN++PLDLFPQ      AG+   G+L+FLRN+ QFQ LR MV +NPQILQPMLQELGKQNP L+RLI+++QA+FL+L+NEP EG  GEG++  Q    MP A+ VTP E++AI+RLEAMGFDRA+V+E + AC++NEELAANYLL++  +F++
Sbjct:  156 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAV-----------PVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

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BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 2.380e-64
Identity = 126/228 (55.26%), Postives = 164/228 (71.93%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEG--NLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++MGGGSWD++TV RALRAA+NNPERAV+YLYSGIPE    PA +                           S GPN++PLDLFPQ   +  AG    G+L+FLR + QFQ LR+MV +NPQILQPMLQELGKQNP L+RLI+++QA+FL+L+NEP EG +G  ++  Q    MP +V VTPEE+++IERLEAMGFDRAIV+E + +C++NEELAANYLL+H  +F++
Sbjct:  154 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETVTIPATN------------LSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSDAAGG-DLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

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BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23B_BOVIN (UV excision repair protein RAD23 homolog B OS=Bos taurus GN=RAD23B PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.230e-37
Identity = 87/228 (38.16%), Postives = 131/228 (57.46%), Query Frame = 2

Query:   23 WDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPME--GGEGNLLGQMAGGMPQA-------VTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++R+ VI ALRA+FNNP+RAVEYL  GIP   E+ AV                           ++  P ++               ++G   L+FLRN  QFQ +R ++Q NP +L  +LQ++G++NP L++ I  HQ  F++++NEP++  GG+G   G  +GG+ +A       + VTP+E++AIERL+A+GF   +V++ YFAC KNE LAAN+LL     FDE
Sbjct:  202 YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAV--------------------VDPPPAASTGAPQSSVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGGGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL--QQNFDE 407

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23B_HUMAN (UV excision repair protein RAD23 homolog B OS=Homo sapiens GN=RAD23B PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.607e-36
Identity = 92/242 (38.02%), Postives = 132/242 (54.55%), Query Frame = 2

Query:   23 WDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGS--------------LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPME--GGEGNLLGQMAGGMPQA-------VTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++R+ VI ALRA+FNNP+RAVEYL  GIP   E+ AV                                  +P      G P   A AA A +              L+FLRN  QFQ +R ++Q NP +L  +LQ++G++NP L++ I  HQ  F++++NEP++  GG+G   G  +GG+ +A       + VTP+E++AIERL+A+GF   +V++ YFAC KNE LAAN+LL     FDE
Sbjct:  202 YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAV---------------------------------VDPPQAASTGAPQSSAVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL--QQNFDE 408

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BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23B_RAT (UV excision repair protein RAD23 homolog B OS=Rattus norvegicus GN=Rad23b PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.042e-35
Identity = 88/234 (37.61%), Postives = 129/234 (55.13%), Query Frame = 2

Query:   23 WDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPME--------GGEGNLLGQMAGGMPQA-------VTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++R+ VI ALRA+FNNP+RAVEYL  GIP   E+ AV                          V++  P +  +              +G   L+FLRN  QFQ +R ++Q NP +L  +LQ++G++NP L++ I  HQ  F++++NEP++        GG G   G   GG+ +A       + VTP+E++AIERL+A+GF   +V++ YFAC KNE LAAN+LL     FDE
Sbjct:  202 YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVD-------------------PPPQAVSTGTPQSPAVAAAAATTTATTTTTSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL--QQNFDE 414

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23B_MOUSE (UV excision repair protein RAD23 homolog B OS=Mus musculus GN=Rad23b PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.361e-35
Identity = 88/235 (37.45%), Postives = 129/235 (54.89%), Query Frame = 2

Query:   23 WDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPME---------GGEGNLLGQMAGGMPQA-------VTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++R+ VI ALRA+FNNP+RAVEYL  GIP   E+ AV                          V++  P +  +              +G   L+FLRN  QFQ +R ++Q NP +L  +LQ++G++NP L++ I  HQ  F++++NEP++         GG G   G   GG+ +A       + VTP+E++AIERL+A+GF   +V++ YFAC KNE LAAN+LL     FDE
Sbjct:  202 YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVD-------------------PPPQAVSTGTPQSPAVAAAAATTTATTTTTSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLL--QQNFDE 415

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Match: RD23A_HUMAN (UV excision repair protein RAD23 homolog A OS=Homo sapiens GN=RAD23A PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.137e-32
Identity = 85/228 (37.28%), Postives = 124/228 (54.39%), Query Frame = 2

Query:   23 WDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPM--------EGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDEQ 682
            ++R+ V+ ALRA++NNP RAVEYL +GIP   E    S                         V  S  +  P              AAG   L+FLR+  QFQ +R ++Q NP +L  +LQ+LG++NP L++ I  HQ  F++++NEP           GE   +G+ A  M   + VTP+E++AIERL+A+GF  ++V++ YFAC KNE LAAN+LL     FD++
Sbjct:  175 YERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGS-------------------------VQESQVSEQP-----------ATEAAGENPLEFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQM-NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLS--QNFDDE 363

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BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: C6TH05_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 8.731e-100
Identity = 185/226 (81.86%), Postives = 196/226 (86.73%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGGSWDRDTV+R LRAA+NNPERAVEYLYSGIPE+AEAP V+ V                       V SSGPNANPLDLFPQGLPN+G+GAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLI++HQ DFLRLINEP+EGGEGN+LGQ+AG MPQAVTVTPEERQAIERLEAMGFDRA VLEVYFACNKNEELAANYLLDHMHEFDE
Sbjct:  177 LDMGGGSWDRDTVVRTLRAAYNNPERAVEYLYSGIPEQAEAPPVTGVPASAQPSNPPADTPQAAQPAS--VPSSGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQLAGTMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 400

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: C6TIN6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 1.489e-99
Identity = 184/226 (81.42%), Postives = 196/226 (86.73%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGGSWDRDTV+RALRAA+NNPERAVEYLYSGIPE+AEAP V++                        V SSGPNANPLDLFPQGLPN+G+GAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLI++HQ DFLRLINEP+EGGEGN+LGQ+A  MPQAVTVTPEERQAIERLEAMGFDRA VLEVYFACNKNEELAANYLLDHMHEFDE
Sbjct:  169 LDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEAPPVTR--EPASAQPANPPAAAPQAAQPASVPSSGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQLASAMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 392

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: C6T9M7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 7.392e-99
Identity = 184/226 (81.42%), Postives = 195/226 (86.28%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGGSWDRDTV+R LRAA+NNPERAVEYLYSGIPE+AEA  V+ V                       V SSGPNANPLDLFPQGLPN+G+GAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLI++HQ DFLRLINEP+EGGEGN+LGQ+AG MPQAVTVTPEERQAIERLEAMGFDRA VLEVYFACNKNEELAANYLLDHMHEFDE
Sbjct:  159 LDMGGGSWDRDTVVRTLRAAYNNPERAVEYLYSGIPEQAEALPVTGVPASAQPSNPPADTPQAAQPAS--VPSSGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQLAGAMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 382

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: B9HJ19_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_873811 PE=4 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 3.796e-95
Identity = 174/224 (77.68%), Postives = 192/224 (85.71%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEF 673
            LDMGGG+WDRDTV+RALRAA+NNPERA+EYLYSGIPE+AEAP V+ +                       V S GPNANPLDLFPQGLPN+G+GA GAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLI++HQ DFLRLINEP+E GEGN+LGQ+A  MPQAVTVTPEER+AIERLEAMGFDRA+VLEV+FACNKNEELAANYLLDHMHEF
Sbjct:  113 LDMGGGTWDRDTVVRALRAAYNNPERAIEYLYSGIPEQAEAPPVAHMPLGGQAPAAQPQQHPTQTAA---VPSGGPNANPLDLFPQGLPNVGSGAGGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQDDFLRLINEPVESGEGNVLGQLAAAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEF 333

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: D7T959_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011907001 PE=4 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 4.197e-94
Identity = 172/226 (76.11%), Postives = 192/226 (84.96%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGG+WDRDTV+RALRAA+NNPERAVEYLYSGIPE+AE P V++                          SSGPNANPLDLFPQG+PN+G+  AGAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP LMRLI++HQADFLRLINEP+EGGEGN+LGQ+A  MPQAVTVTPEER+AI RLEAMGFDRA+VLEV+FACNKNEELAANYLLDHMHEF++
Sbjct:  177 LDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVARAPASGQAANPPAQSQQPVP-----APSSGPNANPLDLFPQGIPNVGSNPAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGGEGNILGQLAAAMPQAVTVTPEEREAIARLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFED 397

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: B9HWI6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_881886 PE=4 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 2.721e-93
Identity = 173/226 (76.55%), Postives = 192/226 (84.96%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGGSWDRDTV+RALRAA+NNPERAVEYLY+GIPE+AEAP V+QV                       V + GPNANPLDLFPQGLPNIG+GAA AG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLI++HQ DFLRLINEP+EGGEGN+ G +A  MPQ+VTVTPEER+AIERL AMGFD A+VLEVYFACNKNEELAANYLLDH+HEF++
Sbjct:  156 LDMGGGSWDRDTVVRALRAAYNNPERAVEYLYTGIPEQAEAPPVAQVPVSEQAPAAQPRQQPAQPTT---VPAGGPNANPLDLFPQGLPNIGSGAAEAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQDDFLRLINEPVEGGEGNVSGPLAAAMPQSVTVTPEEREAIERLGAMGFDPALVLEVYFACNKNEELAANYLLDHIHEFED 378

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: B9SSZ6_RICCO (Uv excision repair protein rad23, putative OS=Ricinus communis GN=RCOM_0352420 PE=4 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 1.350e-92
Identity = 172/230 (74.78%), Postives = 193/230 (83.91%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGS----LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGG+WDRDTV+RALRAA+NNPERAVEYLYSGIPE+AE P V+ V                       V S GPNANPLDLFPQGLPN+G+G AGAG+    LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP+L+RLI++HQ DFLRLINEP+EGGEGN++GQ+A  MPQAVTVTPEER+AIERLEAMGFDR +VLEV+FACNKNEELAANYLLDHMHEF++
Sbjct:  182 LDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVAPVSLSGQAANQPAQPQQPAQPAA--VPSGGPNANPLDLFPQGLPNMGSGGAGAGAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLIQEHQTDFLRLINEPVEGGEGNIMGQLAAAMPQAVTVTPEEREAIERLEAMGFDRGLVLEVFFACNKNEELAANYLLDHMHEFED 409

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: Q1KUM6_9ROSI (Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 3.008e-92
Identity = 172/227 (75.77%), Postives = 193/227 (85.02%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGE-GNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGGSWDRDTV+RALRAA+NNPERAVEYLYSGIPE+AE P V++                          +SGPNANPLDLFPQGLPN+G+   GAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLI++HQADFLRLINEP+EGGE GN++ Q+AGG+PQA+ VTPEER+AIERLEAMGFDRA+VLEV+FACNKNEELAANYLLDH+HEFDE
Sbjct:  213 LDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVTR---PPASGGQPTNPPAQSQQQPAVAPTSGPNANPLDLFPQGLPNVGSNT-GAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGGEGGNIINQLAGGVPQAIQVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHIHEFDE 435

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: D7KZI5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477488 PE=4 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 2.156e-90
Identity = 173/230 (75.22%), Postives = 192/230 (83.48%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGG--EGNLLGQMAGGM--PQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGG+WDR+TV+RALRAAFNNPERAVEYLY+GIPE+AE P V++                          +SGPNANPLDLFPQGLPN+G G  GAG+LDFLRNSQQFQALRAMVQANPQ+LQPMLQELGKQNP+LMRLI+DHQADFLRLINEP+EGG   GNLLGQMA GM  PQA+ VTPEER+AIERLEAMGFDRA+VLEV+FACNKNEELAANYLLDHMHEF+E
Sbjct:  193 LDMGGGTWDRETVVRALRAAFNNPERAVEYLYTGIPEQAEVPPVARAPASFGQPANPSAQTQQPAA----APASGPNANPLDLFPQGLPNVG-GNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFEE 417

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Match: Q1KUV7_9ROSI (Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 2.815e-90
Identity = 170/227 (74.89%), Postives = 188/227 (82.82%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGE-GNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGGSWDRDTV+RALRAA+NNPERAVEYLYSGIPE+AE P V+Q                          +SGPNANPLDLFPQGLPN+G+   GAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP LMRLI++HQADFLRLINEP+EGGE GN+  Q+ G MPQA+ VTPEER+AIERLEAMGF+R +VLEV+FACNKNEELAANYLLDHMHEFDE
Sbjct:  161 LDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVAQAPASGGQPTNPPAQAGQQPAA---APTSGPNANPLDLFPQGLPNVGSNT-GAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGGEGGNISSQLGGAMPQAIQVTPEEREAIERLEAMGFERGLVLEVFFACNKNEELAANYLLDHMHEFDE 383

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT3G02540.3 (| Symbols: RAD23C | Rad23 UV excision repair protein family | chr3:533095-536151 REVERSE LENGTH=418)

HSP 1 Score: 328.561 bits (841), Expect = 3.516e-90
Identity = 170/230 (73.91%), Postives = 190/230 (82.61%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGG--EGNLLGQMAGGM--PQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGG+WDR+TV+ ALRAAFNNPERAVEYLY+GIPE+AE P V++                          +SGPNANPLDLFPQGLPN+G G  GAG+LDFLRNSQQFQALRAMVQANPQ+LQPMLQELGKQNP+LMRLI+DHQADFLRLINEP+EGG   GNLLGQMA GM  PQA+ VT EER+AIERLEAMGF+RA+VLEV+FACNKNEELAANYLLDHMHEF+E
Sbjct:  194 LDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVAR----PPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVG-GNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 418

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT3G02540.1 (| Symbols: RAD23-3, RAD23C | Rad23 UV excision repair protein family | chr3:533095-536151 REVERSE LENGTH=419)

HSP 1 Score: 328.561 bits (841), Expect = 3.516e-90
Identity = 170/230 (73.91%), Postives = 190/230 (82.61%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGG--EGNLLGQMAGGM--PQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            LDMGGG+WDR+TV+ ALRAAFNNPERAVEYLY+GIPE+AE P V++                          +SGPNANPLDLFPQGLPN+G G  GAG+LDFLRNSQQFQALRAMVQANPQ+LQPMLQELGKQNP+LMRLI+DHQADFLRLINEP+EGG   GNLLGQMA GM  PQA+ VT EER+AIERLEAMGF+RA+VLEV+FACNKNEELAANYLLDHMHEF+E
Sbjct:  195 LDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVAR----PPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVG-GNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 419

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT5G38470.1 (| Symbols: RAD23D | Rad23 UV excision repair protein family | chr5:15404720-15407500 FORWARD LENGTH=378)

HSP 1 Score: 322.398 bits (825), Expect = 2.520e-88
Identity = 166/227 (73.13%), Postives = 185/227 (81.50%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDEQ 682
            LDMGGGSWDRDTV+RALRAAFNNPERAVEYLYSGIP +AE P V+Q                          + GPNANPL+LFPQG+P   AGA GAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP L+RLI++HQADFLRLINEP+E GE N++ Q+   MPQAVTVTPEER+AIERLE MGFDRA+VLEV+FACNKNEELAANYLLDHMHEF++Q
Sbjct:  156 LDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPA--AATGGPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVE-GEENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFEDQ 378

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT1G79650.4 (| Symbols: RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=395)

HSP 1 Score: 246.899 bits (629), Expect = 1.345e-65
Identity = 126/228 (55.26%), Postives = 163/228 (71.49%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEG--GEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++MGGGSWD++TV RALRAA+NNPERAV+YLYSGIP+ AE                                S GPN++PLDLFPQ      AG+   G+L+FLRN+ QFQ LR MV +NPQILQPMLQELGKQNP L+RLI+++QA+FL+L+NEP EG  GEG++  Q    MP A+ VTP E++AI+RLEAMGFDRA+V+E + AC++NEELAANYLL++  +F++
Sbjct:  180 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAV-----------PVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT1G79650.1 (| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=371)

HSP 1 Score: 246.899 bits (629), Expect = 1.345e-65
Identity = 126/228 (55.26%), Postives = 163/228 (71.49%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEG--GEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++MGGGSWD++TV RALRAA+NNPERAV+YLYSGIP+ AE                                S GPN++PLDLFPQ      AG+   G+L+FLRN+ QFQ LR MV +NPQILQPMLQELGKQNP L+RLI+++QA+FL+L+NEP EG  GEG++  Q    MP A+ VTP E++AI+RLEAMGFDRA+V+E + AC++NEELAANYLL++  +F++
Sbjct:  156 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAV-----------PVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT1G79650.2 (| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=365)

HSP 1 Score: 246.899 bits (629), Expect = 1.345e-65
Identity = 126/228 (55.26%), Postives = 163/228 (71.49%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEG--GEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++MGGGSWD++TV RALRAA+NNPERAV+YLYSGIP+ AE                                S GPN++PLDLFPQ      AG+   G+L+FLRN+ QFQ LR MV +NPQILQPMLQELGKQNP L+RLI+++QA+FL+L+NEP EG  GEG++  Q    MP A+ VTP E++AI+RLEAMGFDRA+V+E + AC++NEELAANYLL++  +F++
Sbjct:  150 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAV-----------PVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 365

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT1G16190.1 (| Symbols: RAD23A | Rad23 UV excision repair protein family | chr1:5543267-5545892 FORWARD LENGTH=368)

HSP 1 Score: 246.128 bits (627), Expect = 2.295e-65
Identity = 126/228 (55.26%), Postives = 164/228 (71.93%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEG--NLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++MGGGSWD++TV RALRAA+NNPERAV+YLYSGIPE    PA +                           S GPN++PLDLFPQ   +  AG    G+L+FLR + QFQ LR+MV +NPQILQPMLQELGKQNP L+RLI+++QA+FL+L+NEP EG +G  ++  Q    MP +V VTPEE+++IERLEAMGFDRAIV+E + +C++NEELAANYLL+H  +F++
Sbjct:  154 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETVTIPATN------------LSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSDAAGG-DLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT5G38470.2 (| Symbols: RAD23D | Rad23 UV excision repair protein family | chr5:15404720-15407251 FORWARD LENGTH=332)

HSP 1 Score: 219.164 bits (557), Expect = 3.004e-57
Identity = 115/166 (69.28%), Postives = 126/166 (75.90%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEGGEGNLLG 499
            LDMGGGSWDRDTV+RALRAAFNNPERAVEYLYSGIP +AE P V+Q                          + GPNANPL+LFPQG+P   AGA GAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP L+RLI++HQADFLRLINEP+EG E    G
Sbjct:  156 LDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPA--AATGGPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEEWECYG 318

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT1G79650.3 (| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=351)

HSP 1 Score: 203.756 bits (517), Expect = 1.306e-52
Identity = 110/228 (48.25%), Postives = 146/228 (64.04%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIRDHQADFLRLINEPMEG--GEGNLLGQMAGGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE 679
            ++MGGGSWD++TV RALRAA+NNPERAV+YLYSGIP+ AE                                S GPN++PLDLFPQ      AG+   G+L+FLRN+ Q                    ELGKQNP L+RLI+++QA+FL+L+NEP EG  GEG++  Q    MP A+ VTP E++AI+RLEAMGFDRA+V+E + AC++NEELAANYLL++  +F++
Sbjct:  156 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAV-----------PVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQ--------------------ELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 351

[Close]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Match: AT3G02540.2 (| Symbols: RAD23-3, RAD23C | Rad23 UV excision repair protein family | chr3:533906-536151 REVERSE LENGTH=299)

HSP 1 Score: 128.642 bits (322), Expect = 5.340e-30
Identity = 67/109 (61.47%), Postives = 77/109 (70.64%), Query Frame = 2

Query:    2 LDMGGGSWDRDTVIRALRAAFNNPERAVEYLYSGIPERAEAPAVSQVXXXXXXXXXXXXXXXXXXXXXXXVTSSGPNANPLDLFPQGLPNIGAGAAGAGSLDFLRNSQQ 328
            LDMGGG+WDR+TV+ ALRAAFNNPERAVEYLY+GIPE+AE P V++                          +SGPNANPLDLFPQGLPN+G G  GAG+LDFLRNSQQ
Sbjct:  195 LDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVAR----PPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVG-GNPGAGTLDFLRNSQQ 298

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2871 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RD23C_ARATH	3.646e-89	73.91	Putative DNA repair protein RAD23-3 OS=Arabidopsis...	[more]
RD23D_ARATH	2.613e-87	73.13	Putative DNA repair protein RAD23-4 OS=Arabidopsis...	[more]
RAD23_ORYSJ	3.663e-73	60.61	Probable DNA repair protein RAD23 OS=Oryza sativa ...	[more]
RD23A_ARATH	1.395e-64	55.26	Putative DNA repair protein RAD23-1 OS=Arabidopsis...	[more]
RD23B_ARATH	2.380e-64	55.26	Putative DNA repair protein RAD23-2 OS=Arabidopsis...	[more]
RD23B_BOVIN	4.230e-37	38.16	UV excision repair protein RAD23 homolog B OS=Bos ...	[more]
RD23B_HUMAN	1.607e-36	38.02	UV excision repair protein RAD23 homolog B OS=Homo...	[more]
RD23B_RAT	1.042e-35	37.61	UV excision repair protein RAD23 homolog B OS=Ratt...	[more]
RD23B_MOUSE	1.361e-35	37.45	UV excision repair protein RAD23 homolog B OS=Mus ...	[more]
RD23A_HUMAN	3.137e-32	37.28	UV excision repair protein RAD23 homolog A OS=Homo...	[more]

BLAST of Pisum_sativum_v1_Contig2871 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TH05_SOYBN	8.731e-100	81.86	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TIN6_SOYBN	1.489e-99	81.42	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T9M7_SOYBN	7.392e-99	81.42	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9HJ19_POPTR	3.796e-95	77.68	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T959_VITVI	4.197e-94	76.11	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HWI6_POPTR	2.721e-93	76.55	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SSZ6_RICCO	1.350e-92	74.78	Uv excision repair protein rad23, putative OS=Rici...	[more]
Q1KUM6_9ROSI	3.008e-92	75.77	Putative uncharacterized protein OS=Cleome spinosa...	[more]
D7KZI5_ARALY	2.156e-90	75.22	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q1KUV7_9ROSI	2.815e-90	74.89	Putative uncharacterized protein OS=Cleome spinosa...	[more]

BLAST of Pisum_sativum_v1_Contig2871 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G02540.3	3.516e-90	73.91	\| Symbols: RAD23C \| Rad23 UV excision repair prote...	[more]
AT3G02540.1	3.516e-90	73.91	\| Symbols: RAD23-3, RAD23C \| Rad23 UV excision rep...	[more]
AT5G38470.1	2.520e-88	73.13	\| Symbols: RAD23D \| Rad23 UV excision repair prote...	[more]
AT1G79650.4	1.345e-65	55.26	\| Symbols: RAD23B \| Rad23 UV excision repair prote...	[more]
AT1G79650.1	1.345e-65	55.26	\| Symbols: RAD23, RAD23B \| Rad23 UV excision repai...	[more]
AT1G79650.2	1.345e-65	55.26	\| Symbols: RAD23, RAD23B \| Rad23 UV excision repai...	[more]
AT1G16190.1	2.295e-65	55.26	\| Symbols: RAD23A \| Rad23 UV excision repair prote...	[more]
AT5G38470.2	3.004e-57	69.28	\| Symbols: RAD23D \| Rad23 UV excision repair prote...	[more]
AT1G79650.3	1.306e-52	48.25	\| Symbols: RAD23, RAD23B \| Rad23 UV excision repai...	[more]
AT3G02540.2	5.340e-30	61.47	\| Symbols: RAD23-3, RAD23C \| Rad23 UV excision rep...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 57..68 score
None	No IPR available	SEG	seg	seg	coord: 9..20 score: NAcoord: 24..40 score
None	No IPR available	GENE3D	1.10.8.10	no description	coord: 2..37 score: 1.8e-13coord: 179..225 score: 9.5
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..225 score: 2.6
None	No IPR available	SEG	seg	seg	coord: 48..70 score
None	No IPR available	SEG	seg	seg	coord: 37..52 score
None	No IPR available	SEG	seg	seg	coord: 47..79 score
None	No IPR available	SEG	seg	seg	coord: 56..69 score
None	No IPR available	SEG	seg	seg	coord: 24..35 score
None	No IPR available	SEG	seg	seg	coord: 38..60 score
None	No IPR available	SEG	seg	seg	coord: 8..33 score
IPR000449	Ubiquitin-associated/translation elongation factor EF1B, N-terminal	PFAM	PF00627	UBA	coord: 2..31 score: 2.1e-10coord: 183..217 score: 4.9
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 127..149 score: 5.2e-34coord: 176..192 score: 5.2e-34coord: 193..207 score: 5.2e-34coord: 208..223 score: 5.2
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	no description	coord: 99..142 score: 5.2
IPR009060	UBA-like	SUPERFAMILY	46934	UBA-like	coord: 153..225 score: 8.9e-16coord: 8..54 score: 1.9
IPR015360	XPC-binding domain	GENE3D	1.10.10.540	no description	coord: 97..163 score: 2.2
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 101..158 score: 2.9
IPR015360	XPC-binding domain	SUPERFAMILY	101238	XPC-binding domain	coord: 96..167 score: 4
IPR015940	Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote	SMART	SM00165	no description	coord: 1..33 score: 4.3coord: 182..219 score: 1.8
IPR015940	Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote	PROFILE	PS50030	UBA	coord: 1..34 score: 10.884coord: 179..220 score: 14

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2871 ID=Pisum_sativum_v1_Contig2871; Name=Pisum_sativum_v1_Contig2871; organism=Pisum sativum; type=contig; length=1006bp
CCTAGATATGGGTGGAGGAAGCTGGGATAGGGATACTGTTATTCGTGCTC
TTCGAGCCGCCTTCAACAACCCTGAGAGAGCTGTTGAATATTTGTATTCT
GGTATCCCTGAACGAGCTGAAGCCCCAGCAGTATCCCAAGTGCCTGCAAT
TGCGCAGCCTGCGAGTCCTGCAGCTGCAGCTGCAGCTCCACAAGCAGCAC
AGCCTGCTCCTGTTACATCTAGTGGACCTAATGCTAATCCTCTAGACCTC
TTTCCCCAGGGCCTCCCAAATATTGGTGCTGGTGCTGCCGGTGCCGGCTC
TCTGGATTTTCTACGCAACAGTCAGCAATTCCAAGCTCTGCGAGCTATGG
TGCAGGCAAACCCACAAATATTGCAGCCCATGCTACAAGAACTTGGCAAA
CAAAATCCTCATCTTATGAGATTGATTCGAGATCATCAAGCTGACTTTCT
TCGCCTGATTAACGAACCCATGGAAGGTGGCGAAGGGAACCTTTTGGGAC
AAATGGCTGGTGGCATGCCACAAGCAGTAACAGTCACACCCGAGGAGCGC
CAAGCTATTGAACGGCTTGAAGCAATGGGTTTCGACCGTGCTATAGTATT
GGAGGTGTACTTCGCCTGTAACAAAAATGAAGAATTGGCGGCCAACTACC
TTTTAGACCACATGCATGAGTTTGACGAACAATGATCTCCTTTCCAATAA
TTTCCAAATTATTTTTCGTTATCTTTTCTCTCGAGGGACCTTTTTAAAAT
TTTTATACTTGGTGTTTAATGAGGTATTGCTTTATAAAGACAATTTCAAG
TTGACTTTGGACAAGGGATGTTTTTACCTTCTCATTGCCGCCCTTATTTT
TATCATTTTCGCCCCATCGAGGGATCCTTCTCAGTAGTCATATACATAGT
CGTTTGCTTAGCTTCTCTATTATTGGTTTTGTGCATCTTTTTAACAAGTG
TAACTGTGCATCTTTTTTTTTATTCCAAAGTCTTGAGTGCCCTGTATGGA
TAAATT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006289	nucleotide-excision repair
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003684	damaged DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000449	Ubiquitin-associated/translation elongation factor EF1B, N-terminal
IPR004806	Rad23
IPR006636	STI1_HS-bd
IPR009060	UBA-like_sf
IPR015360	XPC-bd
IPR015940	UBA

Search form

Pisum_sativum_v1_Contig2871