Pisum_sativum_v1_Contig2876

Contig Overview
NamePisum_sativum_v1_Contig2876
Unique NamePisum_sativum_v1_Contig2876
Typecontig
OrganismPisum sativum (pea)
Sequence length820
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD860215ESTCD860215:1..620 -Pisum sativum unigene v1n/a
FG535027ESTFG535027:259..820 +Pisum sativum unigene v1n/a
FG538515ESTFG538515:286..802 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860215CD860215Pisum sativumEST
FG535027FG535027Pisum sativumEST
FG538515FG538515Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. SwissProt
Match: ANKZ1_HUMAN (Ankyrin repeat and zinc finger domain-containing protein 1 OS=Homo sapiens GN=ANKZF1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.736e-12
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA +     V  LLE G DP ++D R R PY +A DK  RN FRRFM  NPD +D+N A+VP  LT
Sbjct:  542 AAAAGRGSVVRLLLEAGADPTVQDSRARPPYTVAADKSTRNEFRRFMEKNPDAYDYNKAQVPGPLT 607
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. SwissProt
Match: ANKZ1_BOVIN (Ankyrin repeat and zinc finger domain-containing protein 1 OS=Bos taurus GN=ANKZF1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.549e-11
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA +     V  LLE G DP ++D R R PY +A D+  RN FRRFM  NPD +D++ A+VP  LT
Sbjct:  542 AAAAGRGSVVRLLLEAGADPTVQDSRARPPYTVAADRSTRNEFRRFMEKNPDAYDYSKAQVPGPLT 607
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. SwissProt
Match: ANKZ1_MOUSE (Ankyrin repeat and zinc finger domain-containing protein 1 OS=Mus musculus GN=Ankzf1 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 1.459e-10
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA +     V  LLE G DP ++D R R PY +A DK  RN FRRFM  N D +D+N A+VP  LT
Sbjct:  564 AAAAGRGLVVRLLLEAGADPTVQDSRARPPYTVAADKSTRNEFRRFMEKNLDAYDYNKARVPGPLT 629
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. SwissProt
Match: ANKZ1_RAT (Ankyrin repeat and zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Ankzf1 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.107e-9
Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA +     V  LLE G DP + D R R PY +A D+  RN FRRFM  N D +D++ A+VP  LT
Sbjct:  538 AAAAGRGLVVRLLLEAGADPTVHDSRARPPYTVAADRSTRNEFRRFMEKNLDAYDYSKARVPGPLT 603
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: B9RDF0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1612490 PE=4 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.712e-47
Identity = 107/224 (47.77%), Postives = 126/224 (56.25%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI--------APTSAT-GQSQPRSGVKLSKEEELKXXXXXXXXXXXXXXXXXXXXLKIQANNSISEANKSGLTSDIVCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILEDG 645
            AAQS D+ KV ELLEQGLDP +KD +GRTPYMLA +KEVRNTFRRFMASN D+WDW+AAKVPSALT                                             +        APTSA+ GQ QP   ++LSKEEEL+                             + A KSGL +D+ CSCCN+SLAGK+PFHRYNYKYCST+CMHVH+E+LEDG
Sbjct:  443 AAQSDDAHKVLELLEQGLDPAVKDEKGRTPYMLANEKEVRNTFRRFMASNHDRWDWHAAKVPSALTKEMEESQAAKQAEKDAKKKARAKELKKLRKAKEKAQAQAALSQNSMAASTGHCTAPTSASKGQPQPSGRLQLSKEEELERAQAAEREKRAAAAERRMAAALNSQGTGTTSAAKSGLATDMNCSCCNASLAGKIPFHRYNYKYCSTTCMHVHREVLEDG 666
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: C6T563_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.234e-25
Identity = 61/106 (57.55%), Postives = 71/106 (66.98%), Query Frame = 1 
Query:  337 APTSATGQSQPRSGVKLSKEEELKXXXXXXXXXXXXXXXXXXXXLKIQANNSISEAN----KSGLTSDIVCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILED 642
            A TS  GQSQ +SGV+LSKE++++                    LKIQAN++ +       KSGL  DI CSCCNSSLAGKVPFHRYNYKYCSTSCMHVH+EILED
Sbjct:   54 ASTSVKGQSQLKSGVQLSKEDQIRMAQAAEREKRAAAAEKRIAALKIQANSATTAPTMSEPKSGLAGDIYCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHREILED 159
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: D7U7K9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027532001 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.038e-22
Identity = 53/66 (80.30%), Postives = 57/66 (86.36%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S D  KV ELLEQGLDPCI D RGRTPYML  +KEVRNTFRRFMASN DKWDW+AA+VPSALT
Sbjct:  437 AAKSGDCHKVLELLEQGLDPCIIDERGRTPYMLTTEKEVRNTFRRFMASNLDKWDWHAARVPSALT 502

HSP 2 Score: 90.8929 bits (224), Expect = 1.451e-16
Identity = 50/103 (48.54%), Postives = 59/103 (57.28%), Query Frame = 1 
Query:  358 QSQPRSGVKLSKEEELKXXXXXXXXXXXXXXXXXXXX---LKIQANNSI----SEANKSGLTSDIVCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILEDG 645
            + QP+S   +S+EEELK                       L  Q   +     S   KSG+ SDI CS C +SLAGK+PFHRYNYKYCST+CMHVHKEILEDG
Sbjct:  564 KGQPQSSSTISREEELKRAATAEREKRAAAAERRIAAAASLNAQGPGTTIGPSSSQPKSGIASDINCSYCYASLAGKIPFHRYNYKYCSTTCMHVHKEILEDG 666
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: A5BB65_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011424 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.038e-22
Identity = 53/66 (80.30%), Postives = 57/66 (86.36%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S D  KV ELLEQGLDPCI D RGRTPYML  +KEVRNTFRRFMASN DKWDW+AA+VPSALT
Sbjct:  442 AAKSGDCHKVLELLEQGLDPCIIDERGRTPYMLTTEKEVRNTFRRFMASNLDKWDWHAARVPSALT 507

HSP 2 Score: 89.3521 bits (220), Expect = 4.223e-16
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 1 
Query:  496 SEANKSGLTSDIVCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILEDG 645
            S   KSG+ SDI CS C +SLAGK+PFHRYNYKYCST+CMHVHKEILEDG
Sbjct:  585 SSQPKSGIASDINCSYCYASLAGKIPFHRYNYKYCSTTCMHVHKEILEDG 634
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: Q7XTX8_ORYSJ (OSJNBa0019K04.19 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0019K04.19 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.312e-22
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S ++Q+  ELLEQGLDPCIKD RG+TPY+LA DKEVRNTFRRFMA N DKWDW+AA VPSALT
Sbjct:  424 AAKSGNAQQTLELLEQGLDPCIKDARGKTPYLLASDKEVRNTFRRFMALNLDKWDWHAADVPSALT 489
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: Q0JAV4_ORYSJ (Os04g0574600 protein OS=Oryza sativa subsp. japonica GN=Os04g0574600 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.312e-22
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S ++Q+  ELLEQGLDPCIKD RG+TPY+LA DKEVRNTFRRFMA N DKWDW+AA VPSALT
Sbjct:  424 AAKSGNAQQTLELLEQGLDPCIKDARGKTPYLLASDKEVRNTFRRFMALNLDKWDWHAADVPSALT 489

HSP 2 Score: 78.1814 bits (191), Expect = 9.735e-13
Identity = 40/92 (43.48%), Postives = 50/92 (54.35%), Query Frame = 1 
Query:  385 LSKEEELKXXXXXXXXXXXXXXXXXXXXLKIQANNSISEA------NKSGLTSDIVCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILED 642
            LSKEEE +                    L  Q++++   A       ++    D  CSCC SSL GKVPFHRYNYKYCST+CMH+H E+LED
Sbjct:  574 LSKEEERQRKLAEEREKRAAAAERRFAALAAQSSSTSGTAAAEHPPQRAAAADDTSCSCCFSSLVGKVPFHRYNYKYCSTTCMHLHSEMLED 665
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: B8AT61_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17059 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.312e-22
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S ++Q+  ELLEQGLDPCIKD RG+TPY+LA DKEVRNTFRRFMA N DKWDW+AA VPSALT
Sbjct:  424 AAKSGNAQQTLELLEQGLDPCIKDARGKTPYLLASDKEVRNTFRRFMALNLDKWDWHAADVPSALT 489

HSP 2 Score: 78.1814 bits (191), Expect = 9.735e-13
Identity = 40/92 (43.48%), Postives = 50/92 (54.35%), Query Frame = 1 
Query:  385 LSKEEELKXXXXXXXXXXXXXXXXXXXXLKIQANNSISEA------NKSGLTSDIVCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILED 642
            LSKEEE +                    L  Q++++   A       ++    D  CSCC SSL GKVPFHRYNYKYCST+CMH+H E+LED
Sbjct:  574 LSKEEERQRKLAEEREKRAAAAERRFAALAAQSSSTSGTAAAEHPPQRAAAADDTSCSCCFSSLVGKVPFHRYNYKYCSTTCMHLHSEMLED 665
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: B9GPI4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_410042 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.943e-22
Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            A QS D  +V +LLEQGLDPCIKD RGRTPYMLA DKEVRNTFRRFMA N D+WDW+AA VPSALT
Sbjct:  435 ATQSGDVHQVLKLLEQGLDPCIKDERGRTPYMLANDKEVRNTFRRFMALNIDRWDWHAANVPSALT 500
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: D7KP59_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470081 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.164e-20
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S+D ++V E LE+G+DPC KD RGRTPYMLA +KEVRNTFRRFMASN +KW+W+ AKVPS LT
Sbjct:  428 AAKSSDCERVLEFLEEGMDPCAKDERGRTPYMLANEKEVRNTFRRFMASNLEKWNWHDAKVPSPLT 493
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Match: Q9LPC8_ARATH (F22M8.6 protein OS=Arabidopsis thaliana GN=At1g01930/F22M8_5 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.403e-19
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S D ++V E LE+G+DPC KD RGRTPYMLA +KEVRNTFRRFMA N +KW+W+ AKVPS LT
Sbjct:  429 AAKSGDCERVMEFLEEGMDPCAKDERGRTPYMLANEKEVRNTFRRFMALNLEKWNWHDAKVPSPLT 494
[Close]
BLAST of Pisum_sativum_v1_Contig2876 vs. TAIR peptide
Match: AT1G01930.1 (| Symbols: | zinc finger protein-related | chr1:320041-322809 REVERSE LENGTH=580)

HSP 1 Score: 100.908 bits (250), Expect = 8.923e-22
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1 
Query:    1 AAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALT 198
            AA+S D ++V E LE+G+DPC KD RGRTPYMLA +KEVRNTFRRFMA N +KW+W+ AKVPS LT
Sbjct:  429 AAKSGDCERVMEFLEEGMDPCAKDERGRTPYMLANEKEVRNTFRRFMALNLEKWNWHDAKVPSPLT 494
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2876 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
ANKZ1_HUMAN7.736e-1251.52Ankyrin repeat and zinc finger domain-containing p... [more]
ANKZ1_BOVIN6.549e-1148.48Ankyrin repeat and zinc finger domain-containing p... [more]
ANKZ1_MOUSE1.459e-1050.00Ankyrin repeat and zinc finger domain-containing p... [more]
ANKZ1_RAT2.107e-946.97Ankyrin repeat and zinc finger domain-containing p... [more]
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BLAST of Pisum_sativum_v1_Contig2876 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RDF0_RICCO2.712e-4747.77Putative uncharacterized protein OS=Ricinus commun... [more]
C6T563_SOYBN2.234e-2557.55Putative uncharacterized protein OS=Glycine max PE... [more]
D7U7K9_VITVI1.038e-2280.30Whole genome shotgun sequence of line PN40024, sca... [more]
A5BB65_VITVI1.038e-2280.30Putative uncharacterized protein OS=Vitis vinifera... [more]
Q7XTX8_ORYSJ2.312e-2277.27OSJNBa0019K04.19 protein OS=Oryza sativa subsp. ja... [more]
Q0JAV4_ORYSJ2.312e-2277.27Os04g0574600 protein OS=Oryza sativa subsp. japoni... [more]
B8AT61_ORYSI2.312e-2277.27Putative uncharacterized protein OS=Oryza sativa s... [more]
B9GPI4_POPTR3.943e-2278.79Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7KP59_ARALY2.164e-2071.21Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LPC8_ARATH1.403e-1969.70F22M8.6 protein OS=Arabidopsis thaliana GN=At1g019... [more]
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BLAST of Pisum_sativum_v1_Contig2876 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G01930.18.923e-2269.70| Symbols: | zinc finger protein-related | chr1:3... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020683Ankyrin repeat-containing domainPROFILEPS50297ANK_REP_REGIONcoord: 1..34
score: 9
NoneNo IPR availableSEGsegsegcoord: 67..111
score: NAcoord: 137..156
score
NoneNo IPR availableSEGsegsegcoord: 26..65
score: NAcoord: 86..127
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2876 ID=Pisum_sativum_v1_Contig2876; Name=Pisum_sativum_v1_Contig2876; organism=Pisum sativum; type=contig; length=820bp
GCAGCACAATCTGCTGACTCTCAAAAGGTTACGGAACTCCTGGAACAAGG
CTTGGATCCATGCATCAAAGATGGAAGGGGACGGACCCCGTATATGTTGG
CACCTGACAAGGAAGTCAGGAACACTTTCAGAAGGTTTATGGCTTCAAAT
CCTGACAAATGGGATTGGAATGCTGCAAAAGTGCCTAGTGCATTGACCAA
AGAAATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGA
GAAAGGCTAGAGCAAAAGAATTGAAGAAATTACGCAAGGCAAAAGAAAAG
AAGGCCCAGGCTGAAGCTGCTGAAAAACAAAAGATTGCTCCAACATCAGC
TACAGGACAATCACAACCAAGAAGTGGTGTGAAATTATCAAAAGAGGAGG
AACTAAAAAGAGCACAGGATGAAGAAAGAGAAAAGAGAGCAGCTGCTGCT
GAGAGAAGAATGGCTGCCCTCAAAATCCAAGCTAATAATAGCATATCAGA
GGCTAATAAAAGTGGATTAACCAGTGACATAGTTTGTTCCTGTTGTAATT
CATCACTTGCTGGTAAAGTTCCCTTCCACCGGTATAATTACAAATACTGC
AGCACTTCATGCATGCATGTACACAAAGAGATCCTAGAAGATGGTTGACA
GTGTATTTCCCTAGTGTGTAGTTTTTTTATGTAAGTTAAGATTGATCACA
GTATCTTTTTGTTTATTATTATACGAGGTTGGAATAAATAAGGCATGGTG
AAAGGAATGAATGGCTAAAAACACATAAAACCAGTCTTTTGGTAATTCTT
TGAAAGAATTTGAAAAAAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom