Pisum_sativum_v1_Contig2902

Contig Overview


Name	Pisum_sativum_v1_Contig2902
Unique Name	Pisum_sativum_v1_Contig2902
Type	contig
Organism	Pisum sativum (pea)
Sequence length	452

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CD859908	EST	CD859908:1..452 +	Pisum sativum unigene v1	n/a
CD860084	EST	CD860084:30..437 +	Pisum sativum unigene v1	n/a
GH720256	EST	GH720256:48..427 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD859908	CD859908	Pisum sativum	EST
CD860084	CD860084	Pisum sativum	EST
GH720256	GH720256	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEF2_VICFA (Defensin-like protein 2 OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.552e-16
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 2

Query:  125 CKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMCLC 253
            CKVKS +F GPC  D +C+TVCRGEGY+ GDCHGLRRRCMCLC
Sbjct:    5 CKVKSNRFNGPCLTDTHCSTVCRGEGYKGGDCHGLRRRCMCLC 47

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEF1_VICFA (Defensin-like protein 1 OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.552e-16
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 2

Query:  125 CKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMCLC 253
            CKVKS +F GPC  D +C+TVCRGEGY+ GDCHGLRRRCMCLC
Sbjct:    5 CKVKSNRFHGPCLTDTHCSTVCRGEGYKGGDCHGLRRRCMCLC 47

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DF322_SOLTU (Defensin-like protein P322 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.893e-11
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            ++IAEAR C+  S +F+GPC+ D NCA+VC  E +  G+CHG RRRC C
Sbjct:   22 MRIAEARHCESLSHRFKGPCTRDSNCASVCETERFSGGNCHGFRRRCFC 70

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEF03_ARATH (Putative defensin-like protein 3 OS=Arabidopsis thaliana GN=LCR71 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.893e-11
Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMCLC*FNNTH 271
            EAR CK +S KF+GPC  + NCA VC  EG+ DGDC GL RRC C     NTH
Sbjct:   14 EARICKSRSQKFKGPCVSEDNCANVCHTEGFPDGDCDGLLRRCYC-----NTH 61

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEF_NELNU (Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.472e-11
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 2

Query:   86 AADVTVKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMCL 250
            A ++  K+AEAR C+ +S +F+G C  D NCA+VC+ EG+  GDC G RRRC C+
Sbjct:   20 ATEMGPKVAEARTCESQSHRFKGACLSDTNCASVCQTEGFPAGDCKGARRRCFCV 74

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEF05_ARATH (Defensin-like protein 5 OS=Arabidopsis thaliana GN=PDF2.4 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.507e-11
Identity = 26/45 (57.78%), Postives = 29/45 (64.44%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            EAR C+  S  F GPC    NCA VC  EG+ DGDC G RRRC+C
Sbjct:   28 EARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGFRRRCLC 72

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEFD2_SPIOL (Defensin D2 (Fragment) OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.089e-10
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 2

Query:  107 IAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            I  +R CK  S  F+G C+ D NC T CR EGY  GDC G+RRRCMC
Sbjct:    2 IFSSRKCKTPSKTFKGICTRDSNCDTSCRYEGYPAGDCKGIRRRCMC 48

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.772e-9
Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            EAR C+ KS +F+GPC    NCA VC  EG+  G C G RRRC C
Sbjct:   29 EARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKCRGFRRRCYC 73

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DEF04_ARATH (Defensin-like protein 4 OS=Arabidopsis thaliana GN=PDF2.1 PE=2 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 3.947e-9
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            EAR C  +S +F+G C  D NC  VC  EG+  GDC G RRRC C
Sbjct:   29 EARTCASQSQRFKGKCVSDTNCENVCHNEGFPGGDCRGFRRRCFC 73

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 6.732e-9
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 2

Query:  107 IAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            + EAR C+ +S KF+G C  D NCA VC  E +  G C G RRRC C
Sbjct:   28 VVEARTCESQSHKFKGTCLSDTNCANVCHSERFSGGKCRGFRRRCFC 74

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: B5TGM9_VICFA (Fabatin OS=Vicia faba PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.059e-18
Identity = 44/74 (59.46%), Postives = 50/74 (67.57%), Query Frame = 2

Query:   38 MERKTXXXXXXXXXXXAADVTVKIAEAR--GCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMCLC 253
            MERKT            ADV+VK +EA    CKVKS +F GPC  D +C+TVCRGEGY+ GDCHG RRRCMCLC
Sbjct:    1 MERKTLSFTFMLFLLLVADVSVKTSEALLGRCKVKSNRFNGPCLTDTHCSTVCRGEGYKGGDCHGFRRRCMCLC 74

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: Q6Q8S2_IPOBA (Kunitz-type trypsin inhibitor OS=Ipomoea batatas PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.677e-12
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            + +AEAR C+  S+KF+GPCS D NCATVC  EG+  GDC G RRRC C
Sbjct:   28 IMVAEARMCESASSKFKGPCSRDSNCATVCHTEGFTGGDCKGFRRRCFC 76

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: Q9MB66_TOBAC (Thionin like protein OS=Nicotiana tabacum GN=Nt-thionin PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.157e-11
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 2

Query:  107 IAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            IAEAR C+ +S +F+GPCS D NCATVC  EG+  GDC G RRRC C
Sbjct:   28 IAEARTCESQSHRFKGPCSRDSNCATVCLTEGFSGGDCRGFRRRCFC 74

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: Q7F8K7_ORYSJ (ESTs AU069800(E3445) OS=Oryza sativa subsp. japonica GN=Os03g0130300 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.157e-11
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            V +AEAR C+ +S +F+GPC+   NCA+VC  EG+ DG CHG+RRRCMC
Sbjct:   28 VMVAEARTCESQSHRFKGPCARKANCASVCNTEGFPDGYCHGVRRRCMC 76

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: O24225_ORYSA (Proteinase inhibitor OS=Oryza sativa GN=RPI PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.157e-11
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            V +AEAR C+ +S +F+GPC+   NCA+VC  EG+ DG CHG+RRRCMC
Sbjct:   28 VMVAEARTCESQSHRFKGPCARKANCASVCNTEGFPDGYCHGVRRRCMC 76

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: C5X207_SORBI (Putative uncharacterized protein Sb02g007400 OS=Sorghum bicolor GN=Sb02g007400 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.157e-11
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            V +A AR C+ KS KF+GPCS D+NCATVC  EG+  G C GLRRRC C
Sbjct:   26 VTVALARKCQSKSFKFKGPCSRDENCATVCLTEGFTSGKCRGLRRRCFC 74

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: B8AMD8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09847 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.157e-11
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            V +AEAR C+ +S +F+GPC+   NCA+VC  EG+ DG CHG+RRRCMC
Sbjct:   28 VMVAEARTCESQSHRFKGPCARKANCASVCNTEGFPDGYCHGVRRRCMC 76

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: C5WZX1_SORBI (Putative uncharacterized protein Sb01g048380 OS=Sorghum bicolor GN=Sb01g048380 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.806e-11
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMCL 250
            V +AEAR C+ +S +FRGPC   +NCA VCR EG+ DG C G RRRC CL
Sbjct:   26 VAVAEARTCQSQSHRFRGPCVRRENCANVCRTEGFPDGKCRGFRRRCFCL 75

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: B2CM18_SOLCH (Gamma-thionin/defensin OS=Solanum chacoense GN=DEF1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.277e-11
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 2

Query:  104 KIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            +I EAR C+ +S +F+GPC  +KNCA+VC  EG+  GDC GLRRRC C
Sbjct:   25 RIVEARTCESQSHRFKGPCVSEKNCASVCETEGFSGGDCRGLRRRCFC 72

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Match: B1N682_SOLPI (Defensin protein OS=Solanum pimpinellifolium GN=SUNPIM_69t000005 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.277e-11
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 2

Query:  101 VKIAEARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            +KI EAR C+ +S +F+GPC  +KNCA+VC  EG+  GDC G RRRC C
Sbjct:   24 MKIVEARTCESQSHRFKGPCVSEKNCASVCETEGFSGGDCRGFRRRCFC 72

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TAIR peptide
Match: AT1G61070.1 (| Symbols: LCR66, PDF2.4 | low-molecular-weight cysteine-rich 66 | chr1:22492020-22492470 REVERSE LENGTH=76)

HSP 1 Score: 66.6254 bits (161), Expect = 6.487e-12
Identity = 26/45 (57.78%), Postives = 29/45 (64.44%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            EAR C+  S  F GPC    NCA VC  EG+ DGDC G RRRC+C
Sbjct:   28 EARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGFRRRCLC 72

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TAIR peptide
Match: AT2G02130.1 (| Symbols: PDF2.3, LCR68 | low-molecular-weight cysteine-rich 68 | chr2:540071-540407 FORWARD LENGTH=77)

HSP 1 Score: 61.6178 bits (148), Expect = 2.087e-10
Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            EAR C+ KS +F+GPC    NCA VC  EG+  G C G RRRC C
Sbjct:   29 EARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKCRGFRRRCYC 73

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TAIR peptide
Match: AT2G02120.1 (| Symbols: PDF2.1, LCR70 | Scorpion toxin-like knottin superfamily protein | chr2:538319-538842 FORWARD LENGTH=77)

HSP 1 Score: 60.4622 bits (145), Expect = 4.649e-10
Identity = 24/45 (53.33%), Postives = 28/45 (62.22%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            EAR C  +S +F+G C  D NC  VC  EG+  GDC G RRRC C
Sbjct:   29 EARTCASQSQRFKGKCVSDTNCENVCHNEGFPGGDCRGFRRRCFC 73

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TAIR peptide
Match: AT2G02100.1 (| Symbols: LCR69, PDF2.2 | low-molecular-weight cysteine-rich 69 | chr2:528397-528885 FORWARD LENGTH=77)

HSP 1 Score: 57.7658 bits (138), Expect = 3.013e-9
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            EAR C+ +S +F+G C    NCA VC  EG+  G+C G RRRC C
Sbjct:   29 EARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFC 73

[Close]

BLAST of Pisum_sativum_v1_Contig2902 vs. TAIR peptide
Match: AT5G63660.1 (| Symbols: LCR74, PDF2.5 | Scorpion toxin-like knottin superfamily protein | chr5:25485692-25486062 FORWARD LENGTH=73)

HSP 1 Score: 56.6102 bits (135), Expect = 6.713e-9
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 2

Query:  113 EARGCKVKSTKFRGPCSFDKNCATVCRGEGYRDGDCHGLRRRCMC 247
            E R C+ KS  F+  C+ + NCA VCR EG+  G CHG  RRC C
Sbjct:   25 EGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCYC 69

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2902 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2902 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
DEF2_VICFA	2.552e-16	76.74	Defensin-like protein 2 OS=Vicia faba PE=1 SV=1	[more]
DEF1_VICFA	2.552e-16	76.74	Defensin-like protein 1 OS=Vicia faba PE=1 SV=1	[more]
DF322_SOLTU	1.893e-11	55.10	Defensin-like protein P322 OS=Solanum tuberosum PE...	[more]
DEF03_ARATH	1.893e-11	58.49	Putative defensin-like protein 3 OS=Arabidopsis th...	[more]
DEF_NELNU	2.472e-11	50.91	Defensin-like protein OS=Nelumbo nucifera PE=3 SV=...	[more]
DEF05_ARATH	5.507e-11	57.78	Defensin-like protein 5 OS=Arabidopsis thaliana GN...	[more]
DEFD2_SPIOL	6.089e-10	57.45	Defensin D2 (Fragment) OS=Spinacia oleracea PE=1 S...	[more]
DEF01_ARATH	1.772e-9	55.56	Defensin-like protein 1 OS=Arabidopsis thaliana GN...	[more]
DEF04_ARATH	3.947e-9	53.33	Defensin-like protein 4 OS=Arabidopsis thaliana GN...	[more]
DFSD2_HELAN	6.732e-9	51.06	Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1	[more]

BLAST of Pisum_sativum_v1_Contig2902 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B5TGM9_VICFA	4.059e-18	59.46	Fabatin OS=Vicia faba PE=4 SV=1	[more]
Q6Q8S2_IPOBA	5.677e-12	61.22	Kunitz-type trypsin inhibitor OS=Ipomoea batatas P...	[more]
Q9MB66_TOBAC	2.157e-11	63.83	Thionin like protein OS=Nicotiana tabacum GN=Nt-th...	[more]
Q7F8K7_ORYSJ	2.157e-11	59.18	ESTs AU069800(E3445) OS=Oryza sativa subsp. japoni...	[more]
O24225_ORYSA	2.157e-11	59.18	Proteinase inhibitor OS=Oryza sativa GN=RPI PE=4 S...	[more]
C5X207_SORBI	2.157e-11	63.27	Putative uncharacterized protein Sb02g007400 OS=So...	[more]
B8AMD8_ORYSI	2.157e-11	59.18	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5WZX1_SORBI	4.806e-11	60.00	Putative uncharacterized protein Sb01g048380 OS=So...	[more]
B2CM18_SOLCH	6.277e-11	58.33	Gamma-thionin/defensin OS=Solanum chacoense GN=DEF...	[more]
B1N682_SOLPI	6.277e-11	57.14	Defensin protein OS=Solanum pimpinellifolium GN=SU...	[more]

BLAST of Pisum_sativum_v1_Contig2902 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G61070.1	6.487e-12	57.78	\| Symbols: LCR66, PDF2.4 \| low-molecular-weight cy...	[more]
AT2G02130.1	2.087e-10	55.56	\| Symbols: PDF2.3, LCR68 \| low-molecular-weight cy...	[more]
AT2G02120.1	4.649e-10	53.33	\| Symbols: PDF2.1, LCR70 \| Scorpion toxin-like kno...	[more]
AT2G02100.1	3.013e-9	51.11	\| Symbols: LCR69, PDF2.2 \| low-molecular-weight cy...	[more]
AT5G63660.1	6.713e-9	51.11	\| Symbols: LCR74, PDF2.5 \| Scorpion toxin-like kno...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003614	Knottin	SMART	SM00505	no description	coord: 32..75 score: 6.1
IPR008176	Gamma thionin	PFAM	PF00304	Gamma-thionin	coord: 32..73 score: 4
IPR008176	Gamma thionin	PROSITE	PS00940	GAMMA_THIONIN	coord: 31..54 score
None	No IPR available	GENE3D	3.30.30.10	no description	coord: 32..74 score: 9.4
None	No IPR available	SEG	seg	seg	coord: 9..19 score
None	No IPR available	SUPERFAMILY	57095	Scorpion toxin-like	coord: 31..75 score: 1.1
None	No IPR available	SEG	seg	seg	coord: 37..50 score
None	No IPR available	SEG	seg	seg	coord: 18..28 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2902 ID=Pisum_sativum_v1_Contig2902; Name=Pisum_sativum_v1_Contig2902; organism=Pisum sativum; type=contig; length=452bp
TTCAGCTAAACAACTACTTGTGTTATAACTTGTCATCATGGAGAGGAAAA
CACTCAGTTTCTTGTTCATGCTCTTCCTTCTCTTAGCCGCTGATGTTACG
GTGAAGATAGCAGAGGCGAGAGGCTGTAAGGTTAAGAGCACCAAGTTCAG
AGGACCATGCTCGTTCGACAAAAACTGTGCAACGGTATGCAGGGGAGAAG
GTTACAGAGATGGTGATTGTCACGGCCTCCGTCGCCGCTGTATGTGTCTT
TGTTAGTTCAACAATACCCATGCATGCAATATCCACCGTCAAATCACTCC
TTCAATCGCCATAAATAAATATTCCAGCCACGGTCTTATAAAAATATGAT
CTTTAAGTATGTTCAGTTTAATGTGTAATGGATCTTTCAACGTTGTGTTG
TAATAATATGTGCTAATAAATTTGGTATATCTACATGAATCCAAAAAAAA
AC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Biological Process**
Term	Definition
GO:0006952	defense response

Vocabulary: **INTERPRO**
Term	Definition
IPR003614	Scorpion_toxin-like
IPR008176	Defensin_plant

Search form

Pisum_sativum_v1_Contig2902