Pisum_sativum_v1_Contig2969

Contig Overview


Name	Pisum_sativum_v1_Contig2969
Unique Name	Pisum_sativum_v1_Contig2969
Type	contig
Organism	Pisum sativum (pea)
Sequence length	655

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CD858725	EST	CD858725:1..487 +
CD859010	EST	CD859010:1..555 +
CD859121	EST	CD859121:1..560 +
CD858984	EST	CD858984:1..555 +
CD859120	EST	CD859120:1..560 +
CD860953	EST	CD860953:276..560 +
GH720136	EST	GH720136:22..657 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD858725	CD858725	Pisum sativum	EST
CD859010	CD859010	Pisum sativum	EST
CD859121	CD859121	Pisum sativum	EST
CD858984	CD858984	Pisum sativum	EST
CD859120	CD859120	Pisum sativum	EST
CD860953	CD860953	Pisum sativum	EST
GH720136	GH720136	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 4.895e-95
Identity = 168/181 (92.82%), Postives = 168/181 (92.82%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT
Sbjct:  763 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 943

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.398e-88
Identity = 157/181 (86.74%), Postives = 162/181 (89.50%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK+HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLES+YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  751 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKQHLAPFLPSHPVIPTGGIPEPEQTSPLGTISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 931

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.686e-87
Identity = 156/181 (86.19%), Postives = 160/181 (88.40%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLE +YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  745 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKNHLAPFLPSHPVIPTGGIPQPEKTAPLGAISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 925

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 4.906e-87
Identity = 152/181 (83.98%), Postives = 162/181 (89.50%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAP+LPSHPVVPTGGIPAPE  QPLG+I+AAPWGSALILPISYTYIAMMGSQG+T+ASKIAILNANYMAKRLE++YP+LFRGVNGTVAHEFI+DLR  K TAGIEPEDVAKRL+DYGFHGPTMSWPV GT
Sbjct:  741 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLPSHPVVPTGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGT 921

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 4.906e-87
Identity = 152/181 (83.98%), Postives = 162/181 (89.50%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAP+LPSHPVVPTGGIPAPE  QPLG+I+AAPWGSALILPISYTYIAMMGSQG+T+ASKIAILNANYMAKRLE++YP+LFRGVNGTVAHEFI+DLR  K TAGIEPEDVAKRL+DYGFHGPTMSWPV GT
Sbjct:  741 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLPSHPVVPTGGIPAPEESQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGT 921

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 4.906e-87
Identity = 152/181 (83.98%), Postives = 162/181 (89.50%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAP+LPSHPVVPTGGIPAPE  QPLG+I+AAPWGSALILPISYTYIAMMGSQG+T+ASKIAILNANYMAKRLE++YP+LFRGVNGTVAHEFI+DLR  K TAGIEPEDVAKRL+DYGFHGPTMSWPV GT
Sbjct:  741 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLPSHPVVPTGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGT 921

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 8.369e-87
Identity = 153/181 (84.53%), Postives = 163/181 (90.06%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VKKHLAP+LPSHPVVPTGGIP+P+  +PLG+ISAAPWGSALILPISYTYIAMMGS+GLTDASKIAIL+ANYMAKRLE +YPVLFRGVNGT AHEFIIDLRGFKNTAGIEPEDVAKRL+DYGFHGPTMSWPV GT
Sbjct:  742 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLPSHPVVPTGGIPSPDKSEPLGAISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILSANYMAKRLEKHYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLIDYGFHGPTMSWPVPGT 922

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.154e-86
Identity = 151/181 (83.43%), Postives = 161/181 (88.95%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAP+LPSHPVV TGGIPAPE  QPLG+I+AAPWGSALILPISYTYIAMMGSQG+T+ASKIAILNANYMAKRLE++YP+LFRGVNGTVAHEFI+DLR  K TAGIEPEDVAKRL+DYGFHGPTMSWPV GT
Sbjct:  744 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPYLPSHPVVATGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGT 924

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.941e-63
Identity = 115/181 (63.54%), Postives = 138/181 (76.24%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVG+  PG IGADVCHLNLHKTFCI             V  HL PFLP HPV+ +G     +NPQ +G+++AAPWGSA IL IS+ YI MMG+ GLT A+K+AILNANY+AK+L +YYPVL++G NG VAHE I+DLR  K +A IE +D+AKRL+DYGFH PT+SWPVAGT
Sbjct:  702 YMDGANMNAQVGICRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVASHLVPFLPGHPVLESG-----KNPQNIGAVAAAPWGSASILVISWMYIVMMGADGLTQATKVAILNANYIAKKLAAYYPVLYKGQNGLVAHECILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVAGT 877

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Match: GCSP_ANAVT (Glycine dehydrogenase [decarboxylating] OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gcvP PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 6.453e-63
Identity = 116/181 (64.09%), Postives = 138/181 (76.24%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVG+  PG IGADVCHLNLHKTFCI             V  HL  FLP HPV+ +G     +NPQ +G+++AAPWGSA IL IS+ YIAMMG+ GLT A+K+AILNANY+AKRLE+YYPVL++G NG VAHE I+DLR  K +A IE +D+AKRL+DYGFH PT+SWPV GT
Sbjct:  693 YMDGANMNAQVGICRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVASHLVRFLPGHPVLGSG-----KNPQNIGAVAAAPWGSASILVISWMYIAMMGADGLTQATKVAILNANYIAKRLETYYPVLYKGQNGLVAHECILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVTGT 868

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: D7STR8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035408001 PE=4 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.834e-88
Identity = 156/181 (86.19%), Postives = 163/181 (90.06%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAPFLPSHPVV TGGIPAP+  QPLG+ISAAPWGSALILPISYTYIAMMGS+GLTDASKIAILNANYMAKRLE +YP+LFRGVNGTVAHEFI+DLRGFKNTAGIEPED+AKRLMDYGFHGPTMSWPV GT
Sbjct:  402 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPDKLQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGFKNTAGIEPEDIAKRLMDYGFHGPTMSWPVPGT 582

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: A5B2U7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032016 PE=3 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.834e-88
Identity = 156/181 (86.19%), Postives = 163/181 (90.06%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAPFLPSHPVV TGGIPAP+  QPLG+ISAAPWGSALILPISYTYIAMMGS+GLTDASKIAILNANYMAKRLE +YP+LFRGVNGTVAHEFI+DLRGFKNTAGIEPED+AKRLMDYGFHGPTMSWPV GT
Sbjct:  743 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPDKLQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGFKNTAGIEPEDIAKRLMDYGFHGPTMSWPVPGT 923

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: B9RRS7_RICCO (Glycine dehydrogenase, putative OS=Ricinus communis GN=RCOM_0797460 PE=3 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.619e-88
Identity = 158/181 (87.29%), Postives = 163/181 (90.06%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VKKHLAPFLPSHPV+ TGGIPAP+N QPLG+ISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLE+YYPVLFRGVNGT AHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFH PTMSWPV GT
Sbjct:  763 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVISTGGIPAPDNAQPLGTISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGT 943

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: D7TB84_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015211001 PE=4 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.697e-87
Identity = 155/181 (85.64%), Postives = 163/181 (90.06%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCI             VKKHLAPFLP+HPVVPTGGIP+ EN QPLG+ISAAPWGSALILPISYTYIAMMGS+GLT+ASKIAIL ANYMAKRLE +YP+LFRG+NGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  729 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPAHPVVPTGGIPSSENAQPLGTISAAPWGSALILPISYTYIAMMGSKGLTEASKIAILKANYMAKRLEDHYPILFRGINGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 909

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: Q0WV94_ARATH (Putative glycine dehydrogenase OS=Arabidopsis thaliana GN=At2g26080 PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.939e-87
Identity = 157/181 (86.74%), Postives = 162/181 (89.50%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK+HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLES+YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  751 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKQHLAPFLPSHPVIPTGGIPEPEQTSPLGTISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 931

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: D7LCP3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481465 PE=4 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.939e-87
Identity = 157/181 (86.74%), Postives = 162/181 (89.50%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK+HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLES+YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  750 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKQHLAPFLPSHPVIPTGGIPEPEQTSPLGTISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 930

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: Q38766_AVESA (Victorin binding protein OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 8.424e-87
Identity = 157/181 (86.74%), Postives = 160/181 (88.40%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VKKHLAPFLPSHPV+PTGG P PE   PLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLE +YPVLFRGVNGTVAHEFIIDLRGFK TAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  738 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIPTGGFPLPEKTDPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKATAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 918

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: B9HDN2_POPTR (Precursor of carboxylase p-protein 1, glycine decarboxylase complex OS=Populus trichocarpa GN=gdcP1 PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.877e-86
Identity = 154/181 (85.08%), Postives = 163/181 (90.06%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             V+KHLAP+LPSHPVVPTGGIPAP+  QPLG+ISAAPWGSALILPISYTYIAMMGS+GLTDASKIAILNANYMAKRLE+YYP+LFRGVNGTVAHEFI+DLRG KNTAGIEPEDVAKRLMDYGFH PTMSWPV GT
Sbjct:  766 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVQKHLAPYLPSHPVVPTGGIPAPDQSQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLENYYPILFRGVNGTVAHEFIVDLRGVKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGT 946

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: O22575_9POAL (Glycine decarboxylase P subunit OS=x Tritordeum sp. PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.451e-86
Identity = 156/181 (86.19%), Postives = 160/181 (88.40%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VKKHLAPFLPSHPV+PTGG P PE   PLGSISAAPWGSALILPISYTYIAMMGSQGLT+ASKIAILNANYMAKRLE +YPVLFRGVNGTVAHEFIIDLRGFK TAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  737 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIPTGGFPLPEKTDPLGSISAAPWGSALILPISYTYIAMMGSQGLTEASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKATAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 917

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Match: D7M9B4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491390 PE=4 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.451e-86
Identity = 156/181 (86.19%), Postives = 160/181 (88.40%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLE +YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  745 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKNHLAPFLPSHPVIPTGGIPQPEKTAPLGAISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 925

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TAIR peptide
Match: AT2G26080.1 (| Symbols: AtGLDP2, GLDP2 | glycine decarboxylase P-protein 2 | chr2:11109330-11113786 REVERSE LENGTH=1044)

HSP 1 Score: 324.324 bits (830), Expect = 3.513e-89
Identity = 157/181 (86.74%), Postives = 162/181 (89.50%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK+HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLES+YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  751 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKQHLAPFLPSHPVIPTGGIPEPEQTSPLGTISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 931

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TAIR peptide
Match: AT4G33010.2 (| Symbols: AtGLDP1, GLDP1 | glycine decarboxylase P-protein 1 | chr4:15927133-15931150 REVERSE LENGTH=976)

HSP 1 Score: 322.013 bits (824), Expect = 1.743e-88
Identity = 156/181 (86.19%), Postives = 160/181 (88.40%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLE +YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  745 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKNHLAPFLPSHPVIPTGGIPQPEKTAPLGAISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 925

[Close]

BLAST of Pisum_sativum_v1_Contig2969 vs. TAIR peptide
Match: AT4G33010.1 (| Symbols: AtGLDP1, GLDP1 | glycine decarboxylase P-protein 1 | chr4:15926852-15931150 REVERSE LENGTH=1037)

HSP 1 Score: 322.013 bits (824), Expect = 1.743e-88
Identity = 156/181 (86.19%), Postives = 160/181 (88.40%), Query Frame = 2

Query:   20 YMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKKHLAPFLPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGT 562
            YMDGANMNAQVGLTSPG+IGADVCHLNLHKTFCI             VK HLAPFLPSHPV+PTGGIP PE   PLG+ISAAPWGSALILPISYTYIAMMGS GLTDASKIAILNANYMAKRLE +YPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPV GT
Sbjct:  745 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKNHLAPFLPSHPVIPTGGIPQPEKTAPLGAISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 925

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2969 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2969 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
GCSP_PEA	4.895e-95	92.82	Glycine dehydrogenase [decarboxylating], mitochond...	[more]
GCSP1_ARATH	3.398e-88	86.74	Glycine dehydrogenase [decarboxylating] 1, mitocho...	[more]
GCSP2_ARATH	1.686e-87	86.19	Glycine dehydrogenase [decarboxylating] 2, mitocho...	[more]
GCSP_FLATR	4.906e-87	83.98	Glycine dehydrogenase [decarboxylating], mitochond...	[more]
GCSP_FLAAN	4.906e-87	83.98	Glycine dehydrogenase [decarboxylating], mitochond...	[more]
GCSPB_FLAPR	4.906e-87	83.98	Glycine dehydrogenase [decarboxylating] B, mitocho...	[more]
GCSP_SOLTU	8.369e-87	84.53	Glycine dehydrogenase [decarboxylating], mitochond...	[more]
GCSPA_FLAPR	4.154e-86	83.43	Glycine dehydrogenase [decarboxylating] A, mitocho...	[more]
GCSP_ANASP	4.941e-63	63.54	Glycine dehydrogenase [decarboxylating] OS=Anabaen...	[more]
GCSP_ANAVT	6.453e-63	64.09	Glycine dehydrogenase [decarboxylating] OS=Anabaen...	[more]

BLAST of Pisum_sativum_v1_Contig2969 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7STR8_VITVI	5.834e-88	86.19	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B2U7_VITVI	5.834e-88	86.19	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9RRS7_RICCO	7.619e-88	87.29	Glycine dehydrogenase, putative OS=Ricinus communi...	[more]
D7TB84_VITVI	1.697e-87	85.64	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q0WV94_ARATH	4.939e-87	86.74	Putative glycine dehydrogenase OS=Arabidopsis thal...	[more]
D7LCP3_ARALY	4.939e-87	86.74	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q38766_AVESA	8.424e-87	86.74	Victorin binding protein OS=Avena sativa PE=2 SV=1	[more]
B9HDN2_POPTR	1.877e-86	85.08	Precursor of carboxylase p-protein 1, glycine deca...	[more]
O22575_9POAL	2.451e-86	86.19	Glycine decarboxylase P subunit OS=x Tritordeum sp...	[more]
D7M9B4_ARALY	2.451e-86	86.19	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of Pisum_sativum_v1_Contig2969 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G26080.1	3.513e-89	86.74	\| Symbols: AtGLDP2, GLDP2 \| glycine decarboxylase ...	[more]
AT4G33010.2	1.743e-88	86.19	\| Symbols: AtGLDP1, GLDP1 \| glycine decarboxylase ...	[more]
AT4G33010.1	1.743e-88	86.19	\| Symbols: AtGLDP1, GLDP1 \| glycine decarboxylase ...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	3.40.640.10	no description	coord: 103..104 score: 0.0
IPR015424	Pyridoxal phosphate-dependent transferase, major domain	SUPERFAMILY	53383	PLP-dependent transferases	coord: 7..183 score: 1.5
IPR020581	Glycine cleavage system P protein	PANTHER	PTHR11773	GLYCINE DEHYDROGENASE	coord: 7..187 score: 2.1e
None	No IPR available	SEG	seg	seg	coord: 41..53 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2969 ID=Pisum_sativum_v1_Contig2969; Name=Pisum_sativum_v1_Contig2969; organism=Pisum sativum; type=contig; length=655bp
AGCGTGGTCGCGGCCGAGGTACATGGATGGTGCCAACATGAATGCACAGG
TAGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAAT
CTCCATAAGACATTTTGCATTCCTCACGGAGGAGGTGGCCCTGGCATGGG
TCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCCTCACACCCCG
TGGTACCAACCGGTGGAATTCCTGCACCTGAAAATCCTCAACCACTTGGT
AGTATCTCAGCTGCACCTTGGGGATCAGCACTCATATTGCCAATCTCTTA
CACATACATAGCCATGATGGGATCTCAAGGACTCACTGACGCGTCAAAGA
TAGCCATTTTGAATGCAAACTACATGGCGAAAAGATTGGAGAGTTATTAC
CCAGTTCTTTTCCGCGGAGTCAATGGAACAGTTGCTCATGAATTCATTAT
TGACTTAAGAGGATTTAAGAATACTGCTGGAATAGAGCCTGAAGATGTTG
CGAAACGTCTCATGGACTATGGATTTCATGGACCAACAATGTCATGGCCT
GTCGCTGGTACAACAAATTCTCCAGATTATGGAGCTTCCTTCTCCTGTTA
TCGGACGCAGGAAACGTGCATATATAGTTACTGAATTTTGTGGATATGGA
TTCTC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015421	PyrdxlP-dep_Trfase_major
IPR015424	PyrdxlP-dep_Trfase
IPR020581	GDC_P

Search form

Pisum_sativum_v1_Contig2969