Pisum_sativum_v1_Contig2977

Contig Overview
NamePisum_sativum_v1_Contig2977
Unique NamePisum_sativum_v1_Contig2977
Typecontig
OrganismPisum sativum (pea)
Sequence length552
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD858969ESTCD858969:1..425 +Pisum sativum unigene v1n/a
CD859079ESTCD859079:1..552 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD858969CD858969Pisum sativumEST
CD859079CD859079Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: MIP1_ARATH (MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.293e-21
Identity = 50/89 (56.18%), Postives = 58/89 (65.17%), Query Frame = 3 
Query:   24 KPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEY----GKKGKASCPCCRVQIQQRIRVFGACS 278
            K Q E+IAK            + EAN +RECIICMKDEVSVVFLPCAHQV+C  CSD +        K +CPCCR  +QQRIR+FGA S
Sbjct:  623 KSQGENIAKLLEEIDKLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPCCRGLVQQRIRIFGATS 711
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: RF298_ARATH (Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana GN=RF298 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.935e-13
Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 3 
Query:   84 SEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIR 260
            +E +    REC++C+ +E+SV+FLPCAHQV+C+KC+  + K+    CP CR +IQ+RI+
Sbjct:  750 AESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQ 808
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: RF4_ARATH (Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana GN=RF4 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.766e-12
Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 3 
Query:   93 EANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIR 260
            +    REC++C+ +E+SV+FLPCAHQV+C KC+  + K+G   CP CR  I +RI+
Sbjct:  761 KVKRERECVMCLSEEMSVIFLPCAHQVLCFKCNQLHEKEGMMDCPSCRGTIHRRIQ 816
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: MEX3B_XENLA (RNA-binding protein MEX3B OS=Xenopus laevis GN=mex3b PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.587e-7
Identity = 20/54 (37.04%), Postives = 31/54 (57.41%), Query Frame = 3 
Query:  105 NRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVF 266
            +REC IC + EV    +PC H + C +C++   +K +  CP C   + Q IR+F
Sbjct:  453 SRECSICFESEVIAALVPCGHNLFCMECANRICEKNQPQCPVCHAGVTQAIRIF 506
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: MEX3C_MOUSE (RNA-binding protein MEX3C OS=Mus musculus GN=Mex3c PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 2.707e-7
Identity = 19/60 (31.67%), Postives = 35/60 (58.33%), Query Frame = 3 
Query:   84 SEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRV 263
            S  E+    +C+IC ++EV    +PC H + C +C+++  +K   SCP C+  + Q I++
Sbjct:  591 SPPESRRKHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQI 650
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: MEX3C_HUMAN (RNA-binding protein MEX3C OS=Homo sapiens GN=MEX3C PE=1 SV=3)

HSP 1 Score: 55.0694 bits (131), Expect = 2.707e-7
Identity = 19/60 (31.67%), Postives = 35/60 (58.33%), Query Frame = 3 
Query:   84 SEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRV 263
            S  E+    +C+IC ++EV    +PC H + C +C+++  +K   SCP C+  + Q I++
Sbjct:  598 SPPESRRKHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQI 657
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: MEX3B_MOUSE (RNA-binding protein MEX3B OS=Mus musculus GN=Mex3b PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 3.535e-7
Identity = 18/54 (33.33%), Postives = 31/54 (57.41%), Query Frame = 3 
Query:  105 NRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVF 266
            +R+C +C + EV    +PC H + C +C++   +K +  CP C   + Q IR+F
Sbjct:  547 SRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIF 600
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Match: MEX3B_HUMAN (RNA-binding protein MEX3B OS=Homo sapiens GN=MEX3B PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 3.535e-7
Identity = 18/54 (33.33%), Postives = 31/54 (57.41%), Query Frame = 3 
Query:  105 NRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVF 266
            +R+C +C + EV    +PC H + C +C++   +K +  CP C   + Q IR+F
Sbjct:  515 SRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIF 568
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: B9S1H3_RICCO (Synaptonemal complex protein, putative OS=Ricinus communis GN=RCOM_0865020 PE=4 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.834e-29
Identity = 61/91 (67.03%), Postives = 69/91 (75.82%), Query Frame = 3 
Query:    6 GRGRGTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            G+   TKPQ E+IA+           S+K AN  R+CIICMKDEVS+VFLPCAHQVMCA CSD YGKKGKA+CPCCRV I+QRIRVFGA S
Sbjct:  691 GKPEKTKPQGETIARLLHELDKLEDSSDKGANCERDCIICMKDEVSIVFLPCAHQVMCASCSDNYGKKGKATCPCCRVPIEQRIRVFGASS 781
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: B9N2P5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580093 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.597e-28
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 3 
Query:    6 GRGRGTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            G+    KPQ E+IA+           SEK AN +REC+IC+KDEVSVVFLPCAHQV+CA CSD YGKKGKA+CPCCRV I+QRIRVFGA S
Sbjct:  639 GKSERAKPQGETIARLLHELDKLENSSEKGANCDRECMICLKDEVSVVFLPCAHQVICASCSDNYGKKGKATCPCCRVPIEQRIRVFGASS 729
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: B9MU03_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589991 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.175e-26
Identity = 56/91 (61.54%), Postives = 67/91 (73.63%), Query Frame = 3 
Query:    6 GRGRGTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            G+   TKPQ  +IA+           SEK AN +R+C+ICMKDEVS+V LPCAHQV+CA CS  YGKKGKA+CPCCRV ++QRIRVFGA S
Sbjct:  628 GKSERTKPQGGTIARLLHEIEKLENSSEKGANCDRKCMICMKDEVSIVLLPCAHQVICANCSGNYGKKGKATCPCCRVPVEQRIRVFGASS 718
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: D7TTZ1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013185001 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.237e-26
Identity = 54/87 (62.07%), Postives = 66/87 (75.86%), Query Frame = 3 
Query:   18 GTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            G KPQ E+IA+           SEK  N++RECIIC+KDEVSVVFLPCAH+V+CA C+++YGKKGKA+CP CR  I+QRIR FGA S
Sbjct:  230 GAKPQGETIARLLHELDKLEDSSEKGVNSDRECIICLKDEVSVVFLPCAHEVLCANCNEDYGKKGKATCPSCRAPIEQRIRTFGASS 316
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: Q8L7B1_ARATH (Putative uncharacterized protein At2g35330 OS=Arabidopsis thaliana GN=At2g35330 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.475e-23
Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 3 
Query:   15 RGTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            +  K + E+++K            EKEAN +REC+ICMKDEVSVVFLPCAHQV+CA CSD +   GKA+CPCCR  +QQRIRVFGA S
Sbjct:  651 KSDKSKGETMSKLLEELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKATCPCCRAPVQQRIRVFGASS 738
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: O82304_ARATH (Putative uncharacterized protein At2g35330 OS=Arabidopsis thaliana GN=At2g35330 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.475e-23
Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 3 
Query:   15 RGTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            +  K + E+++K            EKEAN +REC+ICMKDEVSVVFLPCAHQV+CA CSD +   GKA+CPCCR  +QQRIRVFGA S
Sbjct:  624 KSDKSKGETMSKLLEELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKATCPCCRAPVQQRIRVFGASS 711
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: A9SWJ7_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234252 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.635e-16
Identity = 35/64 (54.69%), Postives = 50/64 (78.12%), Query Frame = 3 
Query:   87 EKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            +++   +REC++CM +E+SVVF+PCAHQV+C KC++ + K+G   CP CR  IQQRIRV+GA S
Sbjct:  395 QRDVRRDRECVMCMCEEMSVVFMPCAHQVVCIKCNELHEKQGMRDCPSCRTPIQQRIRVYGASS 458
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: A5ANR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004428 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.635e-16
Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 3 
Query:   18 GTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGK 215
            G KPQ E+IA+           SEK  N++RECIIC+KDEVSVVFLPCAH+V+CA C+++YGKK K
Sbjct:  598 GAKPQGETIARLLHELDKLEDSSEKGVNSDRECIICLKDEVSVVFLPCAHEVLCANCNEDYGKKEK 663
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: D7KHL3_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_680999 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.617e-15
Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 3 
Query:   24 KPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEY----GKKGKASCPCCR 236
            K Q E+IAK            + EAN +RECIICMKDEVSVVFLPCAHQV+C  CSD +        K +CPCCR
Sbjct:  627 KSQGENIAKLLEELDKLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPCCR 701
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Match: Q75KG8_ORYSJ (Os05g0141500 protein OS=Oryza sativa subsp. japonica GN=OJ1489_G03.8 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.082e-13
Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:   93 EANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRI 257
            +   +REC++C+ +E+SVVFLPCAHQV+CAKC+D + K+G   CP CR  IQ+R+
Sbjct:  807 DIQRDRECVMCLSEEMSVVFLPCAHQVVCAKCNDLHDKQGMKECPSCRTPIQRRV 861
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT2G35330.2 (| Symbols: | RING/U-box superfamily protein | chr2:14869260-14871673 FORWARD LENGTH=711)

HSP 1 Score: 112.849 bits (281), Expect = 1.179e-25
Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 3 
Query:   15 RGTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            +  K + E+++K            EKEAN +REC+ICMKDEVSVVFLPCAHQV+CA CSD +   GKA+CPCCR  +QQRIRVFGA S
Sbjct:  624 KSDKSKGETMSKLLEELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKATCPCCRAPVQQRIRVFGASS 711
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT2G35330.1 (| Symbols: | RING/U-box superfamily protein | chr2:14869179-14871673 FORWARD LENGTH=738)

HSP 1 Score: 112.849 bits (281), Expect = 1.179e-25
Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 3 
Query:   15 RGTKPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVFGACS 278
            +  K + E+++K            EKEAN +REC+ICMKDEVSVVFLPCAHQV+CA CSD +   GKA+CPCCR  +QQRIRVFGA S
Sbjct:  651 KSDKSKGETMSKLLEELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKATCPCCRAPVQQRIRVFGASS 738
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT1G32530.1 (| Symbols: | RING/U-box superfamily protein | chr1:11759666-11762386 REVERSE LENGTH=711)

HSP 1 Score: 101.293 bits (251), Expect = 3.551e-22
Identity = 50/89 (56.18%), Postives = 58/89 (65.17%), Query Frame = 3 
Query:   24 KPQRESIAKXXXXXXXXXXXSEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEY----GKKGKASCPCCRVQIQQRIRVFGACS 278
            K Q E+IAK            + EAN +RECIICMKDEVSVVFLPCAHQV+C  CSD +        K +CPCCR  +QQRIR+FGA S
Sbjct:  623 KSQGENIAKLLEEIDKLEGSYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSKVTCPCCRGLVQQRIRIFGATS 711
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT4G03000.2 (| Symbols: | RING/U-box superfamily protein | chr4:1324602-1327348 FORWARD LENGTH=814)

HSP 1 Score: 75.485 bits (184), Expect = 2.087e-14
Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 3 
Query:   84 SEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIR 260
            +E +    REC++C+ +E+SV+FLPCAHQV+C+KC+  + K+    CP CR +IQ+RI+
Sbjct:  750 AESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQ 808
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT4G03000.1 (| Symbols: | RING/U-box superfamily protein | chr4:1324602-1327348 FORWARD LENGTH=814)

HSP 1 Score: 75.485 bits (184), Expect = 2.087e-14
Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 3 
Query:   84 SEKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIR 260
            +E +    REC++C+ +E+SV+FLPCAHQV+C+KC+  + K+    CP CR +IQ+RI+
Sbjct:  750 AESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQ 808
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT1G03365.1 (| Symbols: | RING/U-box superfamily protein | chr1:827182-830191 FORWARD LENGTH=823)

HSP 1 Score: 70.8626 bits (172), Expect = 5.140e-13
Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 3 
Query:   93 EANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIR 260
            +    REC++C+ +E+SV+FLPCAHQV+C KC+  + K+G   CP CR  I +RI+
Sbjct:  761 KVKRERECVMCLSEEMSVIFLPCAHQVLCFKCNQLHEKEGMMDCPSCRGTIHRRIQ 816
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT1G73950.1 (| Symbols: | Transmembrane Fragile-X-F-associated protein | chr1:27800126-27804476 REVERSE LENGTH=466)

HSP 1 Score: 57.3806 bits (137), Expect = 5.880e-9
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 3 
Query:   87 EKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVF 266
            E+  N    C +C + E+SVV LPC H+V+C  CSD+  K     CP CR+ I++R+ V+
Sbjct:  410 ERLQNEKVLCRVCFEREISVVLLPCRHRVLCRNCSDKCKK-----CPFCRITIEERLPVY 464
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT1G18470.1 (| Symbols: | Transmembrane Fragile-X-F-associated protein | chr1:6356407-6360057 REVERSE LENGTH=467)

HSP 1 Score: 53.9138 bits (128), Expect = 6.502e-8
Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 3 
Query:   87 EKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVF 266
            E+  N    C +C + ++S+V LPC H+V+C  C+D+       +CP CR+ I++R+ V+
Sbjct:  411 ERLQNEKVLCRVCFEKDISLVLLPCRHRVLCRTCADKC-----TTCPICRIDIEKRLSVY 465
[Close]
BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Match: AT1G68820.1 (| Symbols: | Transmembrane Fragile-X-F-associated protein | chr1:25865852-25868800 FORWARD LENGTH=468)

HSP 1 Score: 53.5286 bits (127), Expect = 8.491e-8
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 3 
Query:   87 EKEANNNRECIICMKDEVSVVFLPCAHQVMCAKCSDEYGKKGKASCPCCRVQIQQRIRVF 266
            E+  N    C +C +D ++VV LPC H V+C+ C ++  K     CP CRV I++R+ V+
Sbjct:  412 ERLQNEKILCRVCFEDPINVVLLPCRHHVLCSTCCEKCKK-----CPICRVLIEERMPVY 466
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2977 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
MIP1_ARATH3.293e-2156.18MND1-interacting protein 1 OS=Arabidopsis thaliana... [more]
RF298_ARATH1.935e-1347.46Putative E3 ubiquitin-protein ligase RF298 OS=Arab... [more]
RF4_ARATH4.766e-1248.21Putative E3 ubiquitin-protein ligase RF4 OS=Arabid... [more]
MEX3B_XENLA1.587e-737.04RNA-binding protein MEX3B OS=Xenopus laevis GN=mex... [more]
MEX3C_MOUSE2.707e-731.67RNA-binding protein MEX3C OS=Mus musculus GN=Mex3c... [more]
MEX3C_HUMAN2.707e-731.67RNA-binding protein MEX3C OS=Homo sapiens GN=MEX3C... [more]
MEX3B_MOUSE3.535e-733.33RNA-binding protein MEX3B OS=Mus musculus GN=Mex3b... [more]
MEX3B_HUMAN3.535e-733.33RNA-binding protein MEX3B OS=Homo sapiens GN=MEX3B... [more]
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BLAST of Pisum_sativum_v1_Contig2977 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9S1H3_RICCO6.834e-2967.03Synaptonemal complex protein, putative OS=Ricinus ... [more]
B9N2P5_POPTR2.597e-2865.93Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9MU03_POPTR3.175e-2661.54Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TTZ1_VITVI9.237e-2662.07Whole genome shotgun sequence of line PN40024, sca... [more]
Q8L7B1_ARATH1.475e-2359.09Putative uncharacterized protein At2g35330 OS=Arab... [more]
O82304_ARATH1.475e-2359.09Putative uncharacterized protein At2g35330 OS=Arab... [more]
A9SWJ7_PHYPA6.635e-1654.69Predicted protein OS=Physcomitrella patens subsp. ... [more]
A5ANR3_VITVI6.635e-1659.09Putative uncharacterized protein OS=Vitis vinifera... [more]
D7KHL3_ARALY5.617e-1554.67Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q75KG8_ORYSJ3.082e-1354.55Os05g0141500 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of Pisum_sativum_v1_Contig2977 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 9
Match NameE-valueIdentityDescription
AT2G35330.21.179e-2559.09| Symbols: | RING/U-box superfamily protein | chr... [more]
AT2G35330.11.179e-2559.09| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G32530.13.551e-2256.18| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G03000.22.087e-1447.46| Symbols: | RING/U-box superfamily protein | chr... [more]
AT4G03000.12.087e-1447.46| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G03365.15.140e-1348.21| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G73950.15.880e-941.67| Symbols: | Transmembrane Fragile-X-F-associated... [more]
AT1G18470.16.502e-835.00| Symbols: | Transmembrane Fragile-X-F-associated... [more]
AT1G68820.18.491e-838.33| Symbols: | Transmembrane Fragile-X-F-associated... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184no descriptioncoord: 38..77
score: 0.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 38..78
score: 10
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 25..84
score: 8.5
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 38..77
score: 0.0
NoneNo IPR availablePANTHERPTHR10044INHIBITOR OF APOPTOSIScoord: 33..90
score: 6.6
NoneNo IPR availablePANTHERPTHR10044:SF7INHIBITOR OF APOPTOSIS 1, DIAP1coord: 33..90
score: 6.6
NoneNo IPR availableSEGsegsegcoord: 17..27
score
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..84
score: 1.2

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2977 ID=Pisum_sativum_v1_Contig2977; Name=Pisum_sativum_v1_Contig2977; organism=Pisum sativum; type=contig; length=552bp
AGCGTGGTCGCGGCCGAGGTACAAAGCCTCAAAGAGAGTCAATTGCTAAG
CTGCTTCTGGATTTGGATAACCTGGATGATTTATCAGAAAAAGAAGCTAA
TAACAACAGAGAATGCATTATATGTATGAAAGATGAGGTCTCCGTTGTTT
TCTTGCCATGTGCTCACCAAGTCATGTGTGCTAAATGCAGTGATGAGTAT
GGAAAAAAGGGAAAGGCCTCTTGTCCTTGCTGCCGGGTTCAAATCCAACA
GAGAATCCGCGTATTTGGGGCATGCTCTTAGCTTGTTTTATAGACATATT
TCAGTGGGACTGGGGTATGTGTATACCCTATCAATTTACATAAATTTGCA
CTTAATGGTTGGGACAATTTGTCTCTCTGTTCTCCATATTGTATGGGAGT
TTGGTCCATAGGCAAGAATTGTTGTTACTACATTTTACATACATAAAATA
AAAACAAGTCCCTGCATTAACTTGTGACGCCGATGCAATGTATCAAAATT
GTTGGTTGCTTGTCAAAAATAAGAAATGGGCTGGTCATTTTATATAGACA
GG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type