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Contig Overview
Name | Pisum_sativum_v1_Contig3016 |
Unique Name | Pisum_sativum_v1_Contig3016 |
Type | contig |
Organism | Pisum sativum (pea) |
Sequence length | 610 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CD858811 | EST | CD858811:1..376 + |
GH719605 | EST | GH719605:10..566 + |
GH719789 | EST | GH719789:10..610 + |
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 79..91 score |
None | No IPR available | SEG | seg | seg | coord: 11..22 score: NAcoord: 40..51 score |
None | No IPR available | SEG | seg | seg | coord: 1..41 score: NAcoord: 63..83 score |
None | No IPR available | PRINTS | PR01217 | PRICHEXTENSN | coord: 17..29 score: 5.6e-10coord: 34..50 score: 5.6e-10coord: 63..75 score: 5.6e-10coord: 78..99 score: 5.6 |
None | No IPR available | SEG | seg | seg | coord: 17..103 score |
Sequences
The
following sequences are available for this feature:
contig sequence >Pisum_sativum_v1_Contig3016 ID=Pisum_sativum_v1_Contig3016; Name=Pisum_sativum_v1_Contig3016; organism=Pisum sativum; type=contig; length=610bp TTTTTTTTTGCAAAATAAAAAGCTTTATTCGTTTATGATATTACACACAC AGGGCCTTACAATTGTCTAAATTCAAAAACCAAGCACTCCAATAATGAGA ATAACAATTCATAACAAAACAAAATGGGAAAAGAATAATGACTTTTCTTG AGACCAAGTGCATGGAAACTTTCCTTCCGTTGTTTTTTCCTTGTATATTT TGAAATGCATCTTCCTGCTTTGCACTATGTTCTCTTTATTTCCAATATTA TTATATATATTCCTCAAATCCATGGGATACTACGGTAAGCCACTATCTAG TAGTGGTAAGGAGGAGGAGGTGAGGCATATATGTAATGAGGTGGAGGAGG GGAATAGACCGGTGGAGGAGGTGAAGAGTAGACATAGTGTGGTGGAGGTG GTGAGTAAACAGGTGGAGGAGGAGATTTATATTTGTAAACGGGTGGTGGC GAGTAAACAGGTGGAGGAGATTTATATTTGTAAATCGGTGTTGGTGGAGG TGGGAACTTGAATGGCTTTCCAGGTGTTGGAGGAGATATGTGCTTGTAAG GAGGAGGGGGTGAATTGTACTTGTAGAACTGGTGGAGGTGGTGATGAGTA CTTGTAAGGA back to top
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