Pisum_sativum_v1_Contig3061

Contig Overview


Name	Pisum_sativum_v1_Contig3061
Unique Name	Pisum_sativum_v1_Contig3061
Type	contig
Organism	Pisum sativum (pea)
Sequence length	534

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CD858549	EST	CD858549:1..274 +	Pisum sativum unigene v1	n/a
FG532464	EST	FG532464:61..534 -	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD858549	CD858549	Pisum sativum	EST
FG532464	FG532464	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.125e-50
Identity = 103/139 (74.10%), Postives = 110/139 (79.14%), Query Frame = -2

Query:   18 MRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKTVYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 434
            MRCAILYSYAKER+GPLK GV+TVE+AVKTVV PVYD+FH VPVELLKY DRK    V ELDRHVP+NVK VS+QARS              S  AKTVYSKYEP AE CAVSAW+KLNQLPLFPQVAN VLPKAAYCT
Sbjct:    1 MRCAILYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRK----VGELDRHVPSNVKKVSSQARS----VVSEVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCT 131

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BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.123e-47
Identity = 102/190 (53.68%), Postives = 133/190 (70.00%), Query Frame = -2

Query:   18 AEEKIN-NNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKTVYSK-----------YEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 518
            A+ K++   ++ ++LKYLQFVQ A + AL+R A++Y+ AK++SGPLK GV++VE AVKTVVGPVY+K+H VPVE+LKY+D+KVD SV+ELDR VP  VK VS Q           AR+            +ASG+AK+VYSK           YEPKAE CAVSAWKKLNQLPLFP++A V +P AA+C+
Sbjct:    8 AQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCS 197

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BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.123e-38
Identity = 89/176 (50.57%), Postives = 109/176 (61.93%), Query Frame = -2

Query:   24 QQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKTVY-----------SKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAY 485
            ++LKYL FVQ A I+ ++  + LY YAKE SGPLK GV TVE  VKTV+GPVY+KF+ VP ELL +VDRKV+ S+ EL+RHVP+ VK  S Q           A +            +A  + K VY           SKYEP AE  AVSAW+ LN+LPLFPQVA VV+P AAY
Sbjct:   18 KRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAY 193

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.682e-35
Identity = 82/172 (47.67%), Postives = 105/172 (61.05%), Query Frame = -2

Query:    3 QQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKT-----------VYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCTSAATT 485
            ++L+YL+FVQ A    L+  A  Y+YAK+ +GPL+ GVD VE  VK VVGPVYD+FH VP++LLK++DRKV ESV ELDR VP  VK     ARS            +A+GLAK+           +Y++YEP AE  A  AW  LN+LPL P V   VLP AA  ++   T
Sbjct:   33 ERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNT 204

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.682e-35
Identity = 82/172 (47.67%), Postives = 105/172 (61.05%), Query Frame = -2

Query:    3 QQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKT-----------VYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCTSAATT 485
            ++L+YL+FVQ A    L+  A  Y+YAK+ +GPL+ GVD VE  VK VVGPVYD+FH VP++LLK++DRKV ESV ELDR VP  VK     ARS            +A+GLAK+           +Y++YEP AE  A  AW  LN+LPL P V   VLP AA  ++   T
Sbjct:   33 ERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNT 204

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.575e-33
Identity = 67/158 (42.41%), Postives = 104/158 (65.82%), Query Frame = -2

Query:   24 NQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKTVYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAY 497
            + D  +LK+L+F+Q A ++     + LY  AK+ +GPLK GV+ +E+ V+TV+ P+Y+KFH VP +LL +VDRKVD+   +++ +VP+ VK  S+QA +            +   +A++V  KYEP AE  A + W+ LNQLPLFP+VA++V+P A Y
Sbjct:   35 DDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFY 192

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.248e-30
Identity = 77/161 (47.83%), Postives = 100/161 (62.11%), Query Frame = -2

Query:   24 QQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGL-------AKTVYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAY 485
            ++LKYL FV+ A ++A+   + LY YAK+ SGPLK GVDT+E  VKTVV PVY     +P+E +K+VD+ VD SV+ LD  VP  +K VS Q  S           V++S         AK +Y+  EPKAE  AV  W+ LN+LPL PQVANVV+P A Y
Sbjct:    8 ERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVY----YIPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVY 164

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.809e-20
Identity = 65/174 (37.36%), Postives = 89/174 (51.15%), Query Frame = -2

Query:   15 EEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQAR---SXXXXXXXXXXXVSASGLAKTVY----SKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCTS 515
            E +  N+++V  LK+L FV+ ATIH L   + LY YAK+ SGPLK+ V+ VE AV TVV PVY KF  VP  LL ++D KV E   + D H P   K V  QA                 + +G  K  +    ++Y+      +V  W KLNQ      + +  LP AA+ +S
Sbjct:    2 ETEKKNSKEVA-LKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSS 174

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BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 8.681e-16
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = -2

Query:  201 AEEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARS 518
            AE++ N     + LKYL FVQ A  +A+   + +Y +AK++SGPL+ GVD +E  VK V  P+Y++F  +P   LK+VD  V  SV+ +DR +P  VK+ S Q  S
Sbjct:    2 AEDEDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVS 107

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BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: Q2HUF4_MEDTR (Rubber elongation factor OS=Medicago truncatula GN=MtrDRAFT_AC149135g10v2 PE=4 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.069e-69
Identity = 134/172 (77.91%), Postives = 146/172 (84.88%), Query Frame = -2

Query:   18 RQQKPAEEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKTVYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 533
            +QQ   E   ++ ++ Q+LKYL+FVQFATI A+MRCAILYSYAKERSGPLK+GVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSE+DRHVPTNVK VS QA S            SASGLAKTVYSKYEPKAE CAVSAWK+LNQLPLFP VANVVLPKAAYC+
Sbjct:    7 QQQLVDENNRDHTEEEQELKYLEFVQFATIQAVMRCAILYSYAKERSGPLKSGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSEIDRHVPTNVKKVSNQAASVVSEVRRTGVVESASGLAKTVYSKYEPKAEQCAVSAWKRLNQLPLFPTVANVVLPKAAYCS 178

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: B7FK71_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.751e-68
Identity = 133/172 (77.33%), Postives = 145/172 (84.30%), Query Frame = -2

Query:   18 RQQKPAEEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKTVYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 533
            +QQ   E   ++ ++ Q+LKYL+ VQFATI A+MRCAILYSYAKERSGPLK+GVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSE+DRHVPTNVK VS QA S            SASGLAKTVYSKYEPKAE CAVSAWK+LNQLPLFP VANVVLPKAAYC+
Sbjct:    7 QQQLVDENNRDHTEEEQELKYLESVQFATIQAVMRCAILYSYAKERSGPLKSGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSEIDRHVPTNVKKVSNQAASVVSEVRRTGVVESASGLAKTVYSKYEPKAEQCAVSAWKRLNQLPLFPTVANVVLPKAAYCS 178

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: B9RFA8_RICCO (Rubber elongation factor protein, putative OS=Ricinus communis GN=RCOM_1433280 PE=4 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.297e-49
Identity = 108/194 (55.67%), Postives = 132/194 (68.04%), Query Frame = -2

Query:   18 AEEKINNNQDV-----QQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKT-----------VYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 518
            AE+ +N  Q +     ++LKYL+FVQ A +HA+M  A LY YAK+++GPLK GV+TVE  VK+VVGPVYDKFH VP+E+LK+VDRKVDESV++LDR VP  VK VS Q           AR+            +ASGLAKT           +YSKYEPKAE CAVSAW+KLNQLPLFPQVA V +P AAYC+
Sbjct:    2 AEQNVNLQQQMAKENEERLKYLEFVQVAALHAVMTFANLYVYAKDKAGPLKPGVETVEGTVKSVVGPVYDKFHDVPIEVLKFVDRKVDESVTKLDRRVPPVVKQVSAQAYSVAREAPVAARAVASEVQRTGVKETASGLAKTLYAMYEPKAKELYSKYEPKAEQCAVSAWRKLNQLPLFPQVAQVFVPTAAYCS 195

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: D7L3V3_ARALY (Rubber elongation factor family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477839 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.214e-46
Identity = 101/190 (53.16%), Postives = 133/190 (70.00%), Query Frame = -2

Query:   18 AEEKIN-NNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKTVYSK-----------YEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 518
            A+ K++   ++ ++LKYLQFVQ A + AL+R A++Y+ AK++SGPLK GV++VE AVKTVVGPVY+K+H VPVE+LKY+D+KVD SV+ELDR VP  VK VS Q           AR+            +ASG+AK+VY+K           YEPKAE CAVSAWKKLNQLPLFP++A V +P AA+C+
Sbjct:    8 AQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYTKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCS 197

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: A9PAR3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_671681 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.159e-46
Identity = 98/188 (52.13%), Postives = 130/188 (69.15%), Query Frame = -2

Query:   18 EEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKTV-----------YSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 515
            +++++  ++ ++LKYLQFVQ A +HA++    LY YAK+++GPLK GV+TVE  VK+VVGPVYDKF +VP+E+LK+VDRKVDESV+ +D HVP  VK VS++           AR+            +AS LAK+V           YSKYEPKAE  AVSAW+KLNQLPLFPQVA VV+P AA+C+
Sbjct:    9 QQQLDKEEEERRLKYLQFVQVAAVHAVLTFTNLYIYAKDKAGPLKPGVETVEGTVKSVVGPVYDKFREVPIEVLKFVDRKVDESVTNMDNHVPPLVKQVSSRALLAAQNAPVAARAVASEVQRAGVKETASELAKSVYSKYEPTAKELYSKYEPKAEQAAVSAWRKLNQLPLFPQVAQVVVPTAAFCS 196

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: C9E7B4_MORAL (Rubber elongation factor OS=Morus alba PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.221e-45
Identity = 98/178 (55.06%), Postives = 124/178 (69.66%), Query Frame = -2

Query:   18 QQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKTV-----------YSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 485
            Q+LKYL+F+Q A IH ++  + LY  AKE+SGPLK GV+TVE  VK+VVGPVY+K + +P+ELLK++DRKVD SV+ELDRHVP  +K VS+Q           ARS            +ASG+AKTV           Y+KYEPKAE CAV+AW+KLNQLPLFP+VA+VV+P AAY T
Sbjct:   20 QRLKYLEFIQVAVIHTIVYLSNLYGKAKEKSGPLKPGVETVEGTVKSVVGPVYEKVYDIPIELLKFIDRKVDASVTELDRHVPATLKQVSSQAFSAAQKAPEVARSLASEVQRAGVKDTASGIAKTVFTKYEPAAKELYAKYEPKAEQCAVTAWRKLNQLPLFPKVADVVVPTAAYYT 197

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: B9I7I6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_662705 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.303e-44
Identity = 99/188 (52.66%), Postives = 126/188 (67.02%), Query Frame = -2

Query:   18 EEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKTV-----------YSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 515
            ++++   ++ ++LKYLQFVQ A +HA++    LY YAK+++GPLK GV+TVE  VK+VVG VYDKF  VP+E+LK+VDRKVDESV+ LD HVP  VK VS Q           AR+            +AS LAKTV           YSKYEPKAE  AVSAW+KLN+LPLFPQVA VV+P AA+C+
Sbjct:    9 QQQLAREEEERRLKYLQFVQVAAVHAVLTFTNLYIYAKDKAGPLKPGVETVEGTVKSVVGLVYDKFRDVPIEVLKFVDRKVDESVTSLDTHVPPLVKQVSFQALSAAQNAPVAARAVASEVQRSGVKGTASELAKTVYAKYEPTAKELYSKYEPKAEQAAVSAWRKLNKLPLFPQVAQVVVPTAAFCS 196

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: A5B0Z6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033223 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.326e-43
Identity = 97/181 (53.59%), Postives = 121/181 (66.85%), Query Frame = -2

Query:   18 QDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKT-----------VYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 494
            ++ Q+LKYL+FVQ AT+HA++  + LY YAKERSGPLK GV TVE  VKTVV PVYDKFH VP+ELL+++DRKVDESVS+  + VP  VK VS+Q           AR+            +ASGLAK+           +Y+KYEP A+  AVSAW  LN+LPLFPQV  VV+P AAYC+
Sbjct:   15 EEEQRLKYLEFVQVATLHAVLCFSSLYEYAKERSGPLKPGVQTVEGTVKTVVAPVYDKFHGVPIELLRFIDRKVDESVSKFGKQVPPVVKQVSSQAVAAAQKAPSVARAVTSEVQRSGIVDTASGLAKSAYTKCEPAAKDLYTKYEPVAQHYAVSAWHSLNRLPLFPQVVQVVVPTAAYCS 195

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: C6T3N7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.264e-42
Identity = 94/151 (62.25%), Postives = 107/151 (70.86%), Query Frame = -2

Query:   60 EKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKTVYSKYEPKAELCAVSAWKKLNQLPLFP 512
            +++    + Q+LKYL+FVQFATI ALMRCAILYSYAKER+GPLK GVDTVEEAVKTVV PVYD+FH VP E+LKY DRK    V+ELD HVP+NVK VS+QA S              S  AKTVYSKYEP AE CAVSAW +       P
Sbjct:    8 QQLEERTEEQELKYLEFVQFATIQALMRCAILYSYAKERAGPLKPGVDTVEEAVKTVVAPVYDRFHLVPGEVLKYADRK----VAELDSHVPSNVKKVSSQACS----VVSEVRRDGVSAYAKTVYSKYEPTAEQCAVSAWAEAQPASALP 150

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Match: D7PF27_CAPAN (Stress-related protein 1 OS=Capsicum annuum GN=SRP1 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.635e-40
Identity = 91/179 (50.84%), Postives = 114/179 (63.69%), Query Frame = -2

Query:   24 QKPAEEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKTVYSKYEPK-----------AELCAVSAWKKLNQLPLFPQVANVVLPKAAY 527
            Q+P   K+ + ++  +LKYL+F+Q A IHA +  A +Y YAKE SGPLK GV +VE  VKTVVGPVYDKFH VPVE+LK+VDRKVD+SV +++  VP  VK     ARS            +ASGLAKTVY+KYEP            AE  A SAW  LN++P+ P+V   V P AAY
Sbjct:    9 QQPEMAKVQSEEE--KLKYLEFLQVAMIHAALYVAKVYGYAKENSGPLKPGVQSVEGTVKTVVGPVYDKFHDVPVEVLKFVDRKVDQSVRKIETRVPPMVKQAPAAARSVAADVKSAGVMGAASGLAKTVYAKYEPTAKGLYTKYEPIAEQYAASAWLSLNKIPMVPKVTQAVAPTAAY 185

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TAIR peptide
Match: AT3G05500.1 (| Symbols: | Rubber elongation factor protein (REF) | chr3:1593540-1594802 FORWARD LENGTH=246)

HSP 1 Score: 189.119 bits (479), Expect = 1.208e-48
Identity = 102/190 (53.68%), Postives = 133/190 (70.00%), Query Frame = -2

Query:   18 AEEKIN-NNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQ-----------ARSXXXXXXXXXXXVSASGLAKTVYSK-----------YEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCT 518
            A+ K++   ++ ++LKYLQFVQ A + AL+R A++Y+ AK++SGPLK GV++VE AVKTVVGPVY+K+H VPVE+LKY+D+KVD SV+ELDR VP  VK VS Q           AR+            +ASG+AK+VYSK           YEPKAE CAVSAWKKLNQLPLFP++A V +P AA+C+
Sbjct:    8 AQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCS 197

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TAIR peptide
Match: AT2G47780.1 (| Symbols: | Rubber elongation factor protein (REF) | chr2:19570076-19570864 FORWARD LENGTH=235)

HSP 1 Score: 142.124 bits (357), Expect = 1.693e-34
Identity = 67/158 (42.41%), Postives = 104/158 (65.82%), Query Frame = -2

Query:   24 NQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQARSXXXXXXXXXXXVSASGLAKTVYSKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAY 497
            + D  +LK+L+F+Q A ++     + LY  AK+ +GPLK GV+ +E+ V+TV+ P+Y+KFH VP +LL +VDRKVD+   +++ +VP+ VK  S+QA +            +   +A++V  KYEP AE  A + W+ LNQLPLFP+VA++V+P A Y
Sbjct:   35 DDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFY 192

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TAIR peptide
Match: AT1G67360.1 (| Symbols: | Rubber elongation factor protein (REF) | chr1:25237072-25237913 REVERSE LENGTH=240)

HSP 1 Score: 97.0561 bits (240), Expect = 6.245e-21
Identity = 65/174 (37.36%), Postives = 89/174 (51.15%), Query Frame = -2

Query:   15 EEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQAR---SXXXXXXXXXXXVSASGLAKTVY----SKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCTS 515
            E +  N+++V  LK+L FV+ ATIH L   + LY YAK+ SGPLK+ V+ VE AV TVV PVY KF  VP  LL ++D KV E   + D H P   K V  QA                 + +G  K  +    ++Y+      +V  W KLNQ      + +  LP AA+ +S
Sbjct:    2 ETEKKNSKEVA-LKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSS 174

[Close]

BLAST of Pisum_sativum_v1_Contig3061 vs. TAIR peptide
Match: AT1G67360.2 (| Symbols: | Rubber elongation factor protein (REF) | chr1:25237072-25237913 REVERSE LENGTH=240)

HSP 1 Score: 97.0561 bits (240), Expect = 6.245e-21
Identity = 65/174 (37.36%), Postives = 89/174 (51.15%), Query Frame = -2

Query:   15 EEKINNNQDVQQLKYLQFVQFATIHALMRCAILYSYAKERSGPLKTGVDTVEEAVKTVVGPVYDKFHQVPVELLKYVDRKVDESVSELDRHVPTNVKNVSTQAR---SXXXXXXXXXXXVSASGLAKTVY----SKYEPKAELCAVSAWKKLNQLPLFPQVANVVLPKAAYCTS 515
            E +  N+++V  LK+L FV+ ATIH L   + LY YAK+ SGPLK+ V+ VE AV TVV PVY KF  VP  LL ++D KV E   + D H P   K V  QA                 + +G  K  +    ++Y+      +V  W KLNQ      + +  LP AA+ +S
Sbjct:    2 ETEKKNSKEVA-LKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSS 174

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig3061 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig3061 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
SRP_PHAVU	4.125e-50	74.10	Stress-related protein OS=Phaseolus vulgaris GN=SR...	[more]
Y3550_ARATH	1.123e-47	53.68	REF/SRPP-like protein At3g05500 OS=Arabidopsis tha...	[more]
SRP_VITRI	2.123e-38	50.57	Stress-related protein OS=Vitis riparia GN=SRP PE=...	[more]
Y5513_ORYSJ	1.682e-35	47.67	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 ...	[more]
Y5513_ORYSI	1.682e-35	47.67	REF/SRPP-like protein OsI_017815 OS=Oryza sativa s...	[more]
Y2778_ARATH	1.575e-33	42.41	REF/SRPP-like protein At2g47780 OS=Arabidopsis tha...	[more]
SRPP_HEVBR	1.248e-30	47.83	Small rubber particle protein OS=Hevea brasiliensi...	[more]
Y1736_ARATH	5.809e-20	37.36	REF/SRPP-like protein At1g67360 OS=Arabidopsis tha...	[more]
REF_HEVBR	8.681e-16	42.45	Rubber elongation factor protein OS=Hevea brasilie...	[more]

BLAST of Pisum_sativum_v1_Contig3061 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2HUF4_MEDTR	2.069e-69	77.91	Rubber elongation factor OS=Medicago truncatula GN...	[more]
B7FK71_MEDTR	1.751e-68	77.33	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9RFA8_RICCO	5.297e-49	55.67	Rubber elongation factor protein, putative OS=Rici...	[more]
D7L3V3_ARALY	3.214e-46	53.16	Rubber elongation factor family protein OS=Arabido...	[more]
A9PAR3_POPTR	7.159e-46	52.13	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C9E7B4_MORAL	1.221e-45	55.06	Rubber elongation factor OS=Morus alba PE=2 SV=1	[more]
B9I7I6_POPTR	2.303e-44	52.66	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5B0Z6_VITVI	3.326e-43	53.59	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C6T3N7_SOYBN	1.264e-42	62.25	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7PF27_CAPAN	2.635e-40	50.84	Stress-related protein 1 OS=Capsicum annuum GN=SRP...	[more]

BLAST of Pisum_sativum_v1_Contig3061 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G05500.1	1.208e-48	53.68	\| Symbols: \| Rubber elongation factor protein (RE...	[more]
AT2G47780.1	1.693e-34	42.41	\| Symbols: \| Rubber elongation factor protein (RE...	[more]
AT1G67360.1	6.245e-21	37.36	\| Symbols: \| Rubber elongation factor protein (RE...	[more]
AT1G67360.2	6.245e-21	37.36	\| Symbols: \| Rubber elongation factor protein (RE...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 79..94 score
None	No IPR available	SEG	seg	seg	coord: 112..123 score
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 12..173 score: 1.1

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig3061 ID=Pisum_sativum_v1_Contig3061; Name=Pisum_sativum_v1_Contig3061; organism=Pisum sativum; type=contig; length=534bp
AGCGTGGTCGCGGCCGAGGTACAATAAGCAGCTTTTGGCAAAACCACGTT
AGCCACCTGAGGAAAAAGCGGAAGCTGATTCAACTTCTTCCACGCAGACA
CAGCGCACAATTCCGCCTTAGGCTCATACTTCGAGTAAACAGTTTTTGCC
AATCCAGAAGCCGACACAACAACTCCGGCACGGCGGACTTCGGTCACAAC
AGATCGTGCTTGAGTTGAAACATTCTTGACGTTAGTAGGAACATGACGAT
CCAGTTCAGAAACGGACTCATCGACCTTGCGATCAACGTATTTGAGAAGC
TCCACGGGAACTTGATGGAATTTGTCGTAGACTGGACCGACGACGGTCTT
AACGGCTTCTTCAACGGTATCAACACCGGTTTTGAGTGGACCGGAACGTT
CTTTCGCGTAGGAATAGAGGATCGCGCATCGCATCAAGGCATGAATCGTT
GCGAATTGCACGAATTGGAGATACTTCAGTTGTTGCACATCTTGATTATT
GTTAATCTTTTCCTCAGCCGGTTTCTGTTGACGT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR008802	REF

Search form

Pisum_sativum_v1_Contig3061