Pisum_sativum_v1_Contig3082

Contig Overview


Name	Pisum_sativum_v1_Contig3082
Unique Name	Pisum_sativum_v1_Contig3082
Type	contig
Organism	Pisum sativum (pea)
Sequence length	778

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L40423	EST	L40423:1..349 +
FG534731	EST	FG534731:170..778 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
L40423	L40423	Pisum sativum	EST
FG534731	FG534731	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.287e-84
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRF YAS++RLL+LK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTD+D+ LANSVD+GSLRDPQQD+ERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSF+EENKLLIG
Sbjct:  108 AYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.287e-84
Identity = 148/161 (91.93%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRF YAS++RLL+LK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+DD+ LANSVD+GSLRDPQQD+ERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:   98 AYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.178e-83
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRF YAS++RLL+LK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+DD+ LANSVD+GSLRDPQQD+ERVK+PEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:   76 AYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.178e-83
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRF YAS++RLL+LK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+DD+ LANSVD+GSLRDPQQD+ERVK+PEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  112 AYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.538e-83
Identity = 146/161 (90.68%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRF YAS +RLL+LK VLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTDDD++LANSVD+G+LRDPQQD+ERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  105 AYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.538e-83
Identity = 146/161 (90.68%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRF YAS++RLL+LK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT++D+ LANSVD+GSLRDPQQD+ERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSF+EENKLLIG
Sbjct:  108 AYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.102e-81
Identity = 144/161 (89.44%), Postives = 155/161 (96.27%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YAS++RLLVLK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDV SLR P+QD+ERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAP+NLEVPTYSFLEENKLL+G
Sbjct:  113 AYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLVG 273

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.659e-53
Identity = 93/142 (65.49%), Postives = 116/142 (81.69%), Query Frame = -2

Query:  289 VLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 714
            + + + +MSAS DVLAMA +EVDL++I  G  V +KWRGKPVFIR RT  +++ AN V+V +LRDP+ D++RVK PEWLV++GVCTHLGC+P+  AGD+GGWFC CHGSHYDISGRIRKGPAP NLE+P Y F EE KL+IG
Sbjct:   90 IQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPEEGKLVIG 231

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.189e-51
Identity = 92/136 (67.65%), Postives = 112/136 (82.35%), Query Frame = -2

Query:  289 SMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 696
            S SAS DVLAM+  EVDLS I  G  + VKW+GKPVFIR RT +++Q ANSVD+ +LRDPQ DS+RV+ PEWLV+IGVCTHLGC+P+  AGD+GGWFC CHGSHYDISGRIR+GPAP NL +P Y+F E +K++IG
Sbjct:   94 SWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTF-EGSKIIIG 228

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.706e-51
Identity = 87/138 (63.04%), Postives = 116/138 (84.06%), Query Frame = -2

Query:  289 VLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 702
            + SM+A+ DVLAMA +EV+L++I  G  V VKW+GKPVFIR RT  ++Q ANSVD+ +L+DPQ D++RVK+P+WL+++G+CTHLGC+P+  AGDFGGWFC CHGSHYDISGRIRKGPAP NLE+P Y F + +K+++G
Sbjct:   79 ISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEF-DGDKVIVG 215

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: Q38M54_SOLTU (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.386e-82
Identity = 146/161 (90.68%), Postives = 157/161 (97.52%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRF YAS++RLL+LK VLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTDDD++LANSVD+G+LRDPQQD+ERVKNPEWLVV+GVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  105 AYFVLTGGRFVYASLLRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: Q6H4M9_ORYSJ (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Oryza sativa subsp. japonica GN=OSJNBb0003H22.14 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 3.088e-82
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YAS++RLLVLK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT++D+ LANSVD+GSLRDPQQD+ERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  112 AYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDIGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: B9F0A5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06940 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 3.088e-82
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YAS++RLLVLK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT++D+ LANSVD+GSLRDPQQD+ERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  256 AYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDIGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 416

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: A2X5F8_ORYSI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Oryza sativa subsp. indica GN=OsI_07438 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 3.088e-82
Identity = 147/161 (91.30%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YAS++RLLVLK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT++D+ LANSVD+GSLRDPQQD+ERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  112 AYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDIGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: D7M5A4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488163 PE=4 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 6.879e-82
Identity = 146/161 (90.68%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YASVIRLLVLKLV+SMSASKDVLA+ASLEVDL SIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDVGSLRDPQ+DS RVKNPEWL+V+GVCTHLGCIPLPNAGD+GGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  114 AYFVLSGGRFVYASVIRLLVLKLVVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: D7M5A3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909296 PE=4 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 6.879e-82
Identity = 146/161 (90.68%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YASVIRLLVLKLV+SMSASKDVLA+ASLEVDL SIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVD+GSLRDPQ+DS RVKNPEWLVV+GVCTHLGCIPLPNAGD+GGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  112 AYFVLSGGRFVYASVIRLLVLKLVVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: C6TIG2_SOYBN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Glycine max PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 8.985e-82
Identity = 145/161 (90.06%), Postives = 157/161 (97.52%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRFAYAS++RLLVLK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDVGSLRDPQ D++RVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTY+FLEENKL+IG
Sbjct:  105 AYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQPDADRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 265

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: Q9LYR3_ARATH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Arabidopsis thaliana GN=T22N19_80 PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 1.173e-81
Identity = 145/161 (90.06%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YASV+RLLVLKL++SMSASKDVLA+ASLEVDL SIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDVGSLRDPQ+DS RVKNPEWLVV+GVCTHLGCIPLPNAGD+GGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:   80 AYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 240

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: Q94JS0_ARATH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Arabidopsis thaliana GN=At5g13430 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 1.173e-81
Identity = 145/161 (90.06%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YASV+RLLVLKL++SMSASKDVLA+ASLEVDL SIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDVGSLRDPQ+DS RVKNPEWLVV+GVCTHLGCIPLPNAGD+GGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  112 AYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Match: C6THW5_SOYBN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Glycine max PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 1.173e-81
Identity = 145/161 (90.06%), Postives = 157/161 (97.52%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVLTGGRFAYAS++RLLVLK VLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDVGSLRDPQ D++RVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFC CHGSHYDISGRIRKGPAPYNLEVPTY+FLEENKL+IG
Sbjct:  104 AYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQLDADRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 264

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TAIR peptide
Match: AT5G13430.1 (| Symbols: | Ubiquinol-cytochrome C reductase iron-sulfur subunit | chr5:4305414-4307399 REVERSE LENGTH=272)

HSP 1 Score: 306.99 bits (785), Expect = 7.610e-84
Identity = 145/161 (90.06%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YASV+RLLVLKL++SMSASKDVLA+ASLEVDL SIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDVGSLRDPQ+DS RVKNPEWLVV+GVCTHLGCIPLPNAGD+GGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  112 AYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TAIR peptide
Match: AT5G13440.1 (| Symbols: | Ubiquinol-cytochrome C reductase iron-sulfur subunit | chr5:4308431-4310022 REVERSE LENGTH=274)

HSP 1 Score: 306.605 bits (784), Expect = 9.939e-84
Identity = 144/161 (89.44%), Postives = 156/161 (96.89%), Query Frame = -2

Query:  289 ACFVLTGGRFAYASVIRLLVLKLVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVQLANSVDVGSLRDPQQDSERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 771
            A FVL+GGRF YASV+RLLVLKL++SMSASKDVLA+ASLEVDL SIEPGTTVTVKWRGKPVFIRRRT+DD++LANSVDVGSLRDPQ+DS RVKNPEWL+V+GVCTHLGCIPLPNAGD+GGWFC CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG
Sbjct:  114 AYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TAIR peptide
Match: AT4G03280.2 (| Symbols: PETC, PGR1 | photosynthetic electron transfer C | chr4:1440462-1441717 FORWARD LENGTH=210)

HSP 1 Score: 51.9878 bits (123), Expect = 4.413e-7
Identity = 28/71 (39.44%), Postives = 39/71 (54.93%), Query Frame = -2

Query:  295 VKNPEWLVVIG---VCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 498
            V+N + L   G   VCTHLGC+   N  +   + C CHGS Y+  GR+ +GPAP +L +      E  K+L
Sbjct:  123 VENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 192

[Close]

BLAST of Pisum_sativum_v1_Contig3082 vs. TAIR peptide
Match: AT4G03280.1 (| Symbols: PETC, PGR1 | photosynthetic electron transfer C | chr4:1440314-1441717 FORWARD LENGTH=229)

HSP 1 Score: 51.9878 bits (123), Expect = 4.413e-7
Identity = 28/71 (39.44%), Postives = 39/71 (54.93%), Query Frame = -2

Query:  295 VKNPEWLVVIG---VCTHLGCIPLPNAGDFGGWFCLCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 498
            V+N + L   G   VCTHLGC+   N  +   + C CHGS Y+  GR+ +GPAP +L +      E  K+L
Sbjct:  142 VENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 211

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig3082 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig3082 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
UCRI5_TOBAC	5.287e-84	91.30	Cytochrome b-c1 complex subunit Rieske-5, mitochon...	[more]
UCRI1_TOBAC	5.287e-84	91.93	Cytochrome b-c1 complex subunit Rieske-1, mitochon...	[more]
UCRI4_TOBAC	1.178e-83	91.30	Cytochrome b-c1 complex subunit Rieske-4, mitochon...	[more]
UCRI2_TOBAC	1.178e-83	91.30	Cytochrome b-c1 complex subunit Rieske-2, mitochon...	[more]
UCRI_SOLTU	1.538e-83	90.68	Cytochrome b-c1 complex subunit Rieske, mitochondr...	[more]
UCRI3_TOBAC	1.538e-83	90.68	Cytochrome b-c1 complex subunit Rieske-3, mitochon...	[more]
UCRI_MAIZE	1.102e-81	89.44	Cytochrome b-c1 complex subunit Rieske, mitochondr...	[more]
UCRI_NEUCR	1.659e-53	65.49	Cytochrome b-c1 complex subunit Rieske, mitochondr...	[more]
UCRI_SCHPO	1.189e-51	67.65	Cytochrome b-c1 complex subunit Rieske, mitochondr...	[more]
UCRI_YEAST	7.706e-51	63.04	Cytochrome b-c1 complex subunit Rieske, mitochondr...	[more]

BLAST of Pisum_sativum_v1_Contig3082 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q38M54_SOLTU	1.386e-82	90.68	Ubiquinol-cytochrome c reductase iron-sulfur subun...	[more]
Q6H4M9_ORYSJ	3.088e-82	91.30	Ubiquinol-cytochrome c reductase iron-sulfur subun...	[more]
B9F0A5_ORYSJ	3.088e-82	91.30	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A2X5F8_ORYSI	3.088e-82	91.30	Ubiquinol-cytochrome c reductase iron-sulfur subun...	[more]
D7M5A4_ARALY	6.879e-82	90.68	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7M5A3_ARALY	6.879e-82	90.68	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C6TIG2_SOYBN	8.985e-82	90.06	Ubiquinol-cytochrome c reductase iron-sulfur subun...	[more]
Q9LYR3_ARATH	1.173e-81	90.06	Ubiquinol-cytochrome c reductase iron-sulfur subun...	[more]
Q94JS0_ARATH	1.173e-81	90.06	Ubiquinol-cytochrome c reductase iron-sulfur subun...	[more]
C6THW5_SOYBN	1.173e-81	90.06	Ubiquinol-cytochrome c reductase iron-sulfur subun...	[more]

BLAST of Pisum_sativum_v1_Contig3082 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G13430.1	7.610e-84	90.06	\| Symbols: \| Ubiquinol-cytochrome C reductase iro...	[more]
AT5G13440.1	9.939e-84	89.44	\| Symbols: \| Ubiquinol-cytochrome C reductase iro...	[more]
AT4G03280.2	4.413e-7	39.44	\| Symbols: PETC, PGR1 \| photosynthetic electron tr...	[more]
AT4G03280.1	4.413e-7	39.44	\| Symbols: PETC, PGR1 \| photosynthetic electron tr...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 32..42 score
None	No IPR available	SEG	seg	seg	coord: 60..69 score
None	No IPR available	SEG	seg	seg	coord: 4..10 score: NAcoord: 28..40 score
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 3..32 score: 2.5
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 99..110 score: 1.8e-16coord: 121..133 score: 1.8e-16coord: 133..145 score: 1.8
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAMs	TIGR01416	Rieske_proteo: ubiquinol-cytochrome c r	coord: 9..161 score: 1.1
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT-RELATED	coord: 3..161 score: 5.3e
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	GENE3D	2.102.10.10	no description	coord: 32..161 score: 2.1
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 92..150 score: 3.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROFILE	PS51296	RIESKE	coord: 91..159 score: 16
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	SUPERFAMILY	50022	ISP domain	coord: 20..160 score: 3.8

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig3082 ID=Pisum_sativum_v1_Contig3082; Name=Pisum_sativum_v1_Contig3082; organism=Pisum sativum; type=contig; length=778bp
TTGCTATCAGATTTCCAAATGTAATTTATGATAGAGTACAAAGCAATATG
CCCGAAGTCATCAGCTTTTAAACAATTCATTTGTAAATTGTAAACAAAAA
GCCAGGCAATTATTGATACAAGTATCGTCAAACAGTAATACTTAAAATTC
AGAGATACATAAAAACTTGCTAAAACAACAAATAATAATGATTTCCAGGC
CAAGTATGTCCATGGCGCATTTCGACATTATCCAATAAATCAAAAATATT
TTGAACTAATTTCACTATTGAGCAGCTCAAGGTCTTCAACCGATCAACAA
CTTGTTTTCCTCCAAGAATGAATAAGTTGGTACCTCCAGATTGTATGGTG
CAGGTCCCTTCCTAATTCTGCCAGAAATATCATAATGTGACCCATGGCAT
AGGCAAAACCATCCACCAAAGTCCCCAGCATTTGGCAAGGGAATGCAACC
TAGATGTGTGCAAACACCAATCACAACAAGCCATTCTGGGTTCTTGACTC
TCTCAGAATCTTGTTGAGGGTCACGAAGAGATCCAACATCAACACTGTTT
GCCAACTGCACATCGTCATCTGTTCTGCGCCTGATGAATACTGGCTTTCC
ACGCCACTTAACGGTGACAGTAGTGCCTGGCTCAATGCTGGAGAGATCAA
CTTCAAGTGAAGCCATAGCAAGAACATCCTTACTTGCTGACATGCTGAGG
ACAAGCTTGAGGACAAGAAGACGGATCACAGAAGCATAAGCAAACCTTCC
ACCTGTTAGGACAAAGCATGCTTATGCA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008121	ubiquinol-cytochrome-c reductase activity
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR004192	Rieske_TM
IPR005805	Rieske_Fe-S_prot_C
IPR006317	Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR014349	Rieske_Fe-S_prot
IPR017941	Rieske_2Fe-2S

Search form

Pisum_sativum_v1_Contig3082