Pisum_sativum_v1_Contig329

Contig Overview
NamePisum_sativum_v1_Contig329
Unique NamePisum_sativum_v1_Contig329
Typecontig
OrganismPisum sativum (pea)
Sequence length500
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FG535269ESTFG535269:1..335 +Pisum sativum unigene v1n/a
EX569228ESTEX569228:46..402 +Pisum sativum unigene v1n/a
FG537120ESTFG537120:17..500 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG535269FG535269Pisum sativumEST
EX569228EX569228Pisum sativumEST
FG537120FG537120Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: D7T340_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032137001 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.512e-12
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 3
Query:    3 TDELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLAM 149
            T+E+RKQK+EEL +LERAH+EY NMK RME +IKDLL KMEATK NLA+
Sbjct: 1021 TEEMRKQKLEELHSLERAHREYYNMKMRMEEDIKDLLLKMEATKRNLAI 1069          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: B9RVN5_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0967030 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.579e-12
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 3
Query:    6 DELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLAM 149
            +E+RKQK EE QALERAH+EY +MK RME++IKDLL KMEATK NLAM
Sbjct:  985 EEMRKQKFEEFQALERAHREYFSMKMRMEADIKDLLLKMEATKRNLAM 1032          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: B9HNR5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1087856 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.084e-10
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 3
Query:    6 DELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLAM 149
            +E+RKQK EE QALERAH+EY +MK RME++IKDLL KMEA K N+ +
Sbjct:  784 EEMRKQKFEEFQALERAHREYFSMKTRMEADIKDLLLKMEAAKRNITL 831          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: B9GFC5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1068407 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.084e-10
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 3
Query:    6 DELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLAM 149
            +E+R+Q+ EE Q+LERAH+EY +MK RME++IKDLL KMEATK NL M
Sbjct:  767 EEMRRQRFEEFQSLERAHREYYSMKMRMEADIKDLLLKMEATKRNLTM 814          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: Q2L362_MALDO (Putative uncharacterized protein OS=Malus domestica GN=Md49N23.020 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.669e-9
Identity = 29/47 (61.70%), Postives = 40/47 (85.11%), Query Frame = 3
Query:    6 DELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLA 146
            +E+  +K+EE+QAL+R H+EY NMK RM+++IKDLL KMEATK NL+
Sbjct:  683 EEMHSKKLEEVQALDRVHREYSNMKMRMQADIKDLLLKMEATKRNLS 729          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: Q10PX0_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g11890 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.587e-8
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 3
Query:    9 ELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLA 146
            E RK+KIEELQ +ER H  +L+MK RME  I++LL KMEATK N +
Sbjct: 1394 EQRKRKIEELQVIERTHHRFLSMKTRMEGSIRELLLKMEATKQNFS 1439          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: B9F685_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_09937 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.587e-8
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 3
Query:    9 ELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLA 146
            E RK+KIEELQ +ER H  +L+MK RME  I++LL KMEATK N +
Sbjct:  685 EQRKRKIEELQVIERTHHRFLSMKTRMEGSIRELLLKMEATKQNFS 730          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: A2XE00_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10545 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.587e-8
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 3
Query:    9 ELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLA 146
            E RK+KIEELQ +ER H  +L+MK RME  I++LL KMEATK N +
Sbjct: 1189 EQRKRKIEELQVIERTHHRFLSMKTRMEGSIRELLLKMEATKQNFS 1234          
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Match: C5WSR1_SORBI (Putative uncharacterized protein Sb01g042710 OS=Sorghum bicolor GN=Sb01g042710 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.269e-7
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 3
Query:    9 ELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMN 140
            E RKQKIEELQ +ER H E+ +MK RM + I +LLSKMEA K N
Sbjct: 1328 ERRKQKIEELQVIERTHHEFRSMKTRMVASIGELLSKMEALKQN 1371          
BLAST of Pisum_sativum_v1_Contig329 vs. TAIR peptide
Match: AT1G14740.1 (| Symbols: | Protein of unknown function (DUF1423) | chr1:5075450-5077732 REVERSE LENGTH=733)

HSP 1 Score: 53.9138 bits (128), Expect = 5.350e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 3
Query:    3 TDELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNL 143
            T+E R+ K+EEL+ LE +H +Y NMK RME+EI  LL +ME T+  L
Sbjct:  686 TEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVTRQQL 732          
BLAST of Pisum_sativum_v1_Contig329 vs. TAIR peptide
Match: AT3G63500.2 (| Symbols: | Protein of unknown function (DUF1423) | chr3:23446331-23449991 REVERSE LENGTH=1162)

HSP 1 Score: 52.373 bits (124), Expect = 1.556e-7
Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 3
Query:    9 ELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLAM 149
            E R+++ EEL+A++R  +E+  MK RME E++ LL+KME TK +LA+
Sbjct: 1116 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMTKQSLAL 1162          
BLAST of Pisum_sativum_v1_Contig329 vs. TAIR peptide
Match: AT3G63500.1 (| Symbols: | Protein of unknown function (DUF1423) | chr3:23446331-23449166 REVERSE LENGTH=887)

HSP 1 Score: 52.373 bits (124), Expect = 1.556e-7
Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 3
Query:    9 ELRKQKIEELQALERAHQEYLNMKRRMESEIKDLLSKMEATKMNLAM 149
            E R+++ EEL+A++R  +E+  MK RME E++ LL+KME TK +LA+
Sbjct:  841 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMTKQSLAL 887          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig329 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
D7T340_VITVI1.512e-1273.47Whole genome shotgun sequence of line PN40024, sca... [more]
B9RVN5_RICCO2.579e-1275.00Protein binding protein, putative OS=Ricinus commu... [more]
B9HNR5_POPTR1.084e-1066.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GFC5_POPTR1.084e-1066.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q2L362_MALDO2.669e-961.70Putative uncharacterized protein OS=Malus domestic... [more]
Q10PX0_ORYSJ8.587e-860.87Expressed protein OS=Oryza sativa subsp. japonica ... [more]
B9F685_ORYSJ8.587e-860.87Putative uncharacterized protein OS=Oryza sativa s... [more]
A2XE00_ORYSI8.587e-860.87Putative uncharacterized protein OS=Oryza sativa s... [more]
C5WSR1_SORBI7.269e-763.64Putative uncharacterized protein Sb01g042710 OS=So... [more]
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BLAST of Pisum_sativum_v1_Contig329 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G14740.15.350e-853.19| Symbols: | Protein of unknown function (DUF1423... [more]
AT3G63500.21.556e-748.94| Symbols: | Protein of unknown function (DUF1423... [more]
AT3G63500.11.556e-748.94| Symbols: | Protein of unknown function (DUF1423... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004082Protein of unknown function DUF1423, plantPFAMPF07227DUF1423coord: 1..37
score: 4

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig329 ID=Pisum_sativum_v1_Contig329; Name=Pisum_sativum_v1_Contig329; organism=Pisum sativum; type=contig; length=500bp
AAACAGATGAATTGCGTAAACAAAAGATAGAAGAACTCCAAGCATTGGAG
AGGGCACATCAGGAGTATTTGAACATGAAAAGGAGAATGGAGTCAGAGAT
TAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAACCTTGCCATGT
GACCAGATCAAACATATTTAGGATAGTTCTTTCAGGTAAATGTATTATGG
CTCATCCTGAAATTTGTCGGTTCTAGTGCTCTGCCCTATTGTTGTGAGCT
ACTATAGTTCCTGATCGATAGTTGTATTTACTTGTTGTGGTAGTTCTTTT
GCTTATAAGCTGCTAACCAAATCTGTAGATTCCATCACAGTAGTTATCAG
TCTTATAAAACAATCTCAATTGTGGAATTAGCTTAAAACAATTTATTATT
TGAACAGACAAAAAATGGACAGCATGTGGCTGGATTTGCTGTACAGGCTT
GTTGTACTAACTGTCAGTGTAGGAGAATTATAAATTAGAAACCTTGGGGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004082OBERON