Pisum_sativum_v1_Contig5

Contig Overview


Name	Pisum_sativum_v1_Contig5
Unique Name	Pisum_sativum_v1_Contig5
Type	contig
Organism	Pisum sativum (pea)
Sequence length	721

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
FG532026	EST	FG532026:1..445 +
EX569351	EST	EX569351:15..713 +
EX569352	EST	EX569352:23..721 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FG532026	FG532026	Pisum sativum	EST
EX569351	EX569351	Pisum sativum	EST
EX569352	EX569352	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Match: TM208_DANRE (Transmembrane protein 208 OS=Danio rerio GN=tmem208 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.859e-17
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMT-TGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPA 344
            EEN              N IY+ + +L+F++S ++  W  L      Y   Y+ ++ MA P++AEDG LLDGG D+    G+  +L DVI +T+ VQV S +S  FWY++L+ PA
Sbjct:   17 EENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVGSYRSMSAMAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWYLWLLAPA 131

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Match: TM208_MOUSE (Transmembrane protein 208 OS=Mus musculus GN=Tmem208 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.482e-13
Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMT-TGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAY 356
            EEN              N IY ++ ++ F+SS ++  W+ L  +   Y   Y  ++ MA  S++EDG L+DGG D+    G+  +L DVI +T+ VQV S  S   W  +L+ P    Y
Sbjct:   17 EENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGASYHSMSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFWLLAPGRALY 135

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Match: TM208_BOVIN (Transmembrane protein 208 OS=Bos taurus GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.112e-12
Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMT-TGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAY 356
            EEN              N IY ++ +++F+SS ++  W+ L  +   Y   Y  ++ MA  +++EDG L+DGG D+    G+  +L DVI +T+ VQV S  S   W  +L+ P    Y
Sbjct:   17 EENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGASYHSMSSMARAAFSEDGALVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFWLLAPGRALY 135

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Match: TM208_HUMAN (Transmembrane protein 208 OS=Homo sapiens GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.759e-12
Identity = 38/119 (31.93%), Postives = 60/119 (50.42%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMT-TGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAY 356
            EEN              N IY ++ ++ F+SS ++  W+ L  +   Y   Y  ++ MA  +++EDG L+DGG D+    G+  +L DVI +T+ VQV S  S   W  +L+ P    Y
Sbjct:   17 EENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGASYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRALY 135

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Match: TM208_XENLA (Transmembrane protein 208 OS=Xenopus laevis GN=tmem208 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.603e-12
Identity = 38/119 (31.93%), Postives = 59/119 (49.58%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMT-TGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAY 356
            EEN               V+   I + +F+SS  +  W  L  + + Y   Y+ +  MA  S++EDG LLDGG D+    G+  ++ D++ +T+ VQV S  S  FWY +L+ P    Y
Sbjct:   17 EENKETLSFYLRIILGATVLCGAINLGVFYSSSNFWTWATLVFSGIVYAGAYRSMRSMAQASFSEDGSLLDGGIDLNMEQGMAEHIKDIVLLTAIVQVLSCFSLYFWYFWLLAPGRALY 135

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Match: TM208_CHICK (Transmembrane protein 208 OS=Gallus gallus GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.984e-11
Identity = 37/128 (28.91%), Postives = 60/128 (46.88%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTT----GGVCGYLH------DVIYITSFVQVASIISGKFWYIYLVIPAFGAY 356
            EEN              + +Y  + +++F+ + +   W+  A +S  Y   Y+ ++ MA P++A+DG L DGG D+         C + H      DVI +T+ VQV S  S   WY +L+ P    Y
Sbjct:   17 EENRETLRFYLRIILGASAVYAAVNLVVFYPAASAWTWLAFAFSSAVYGASYRSMSSMARPAFADDGSLADGGIDLNMEQGWQSECPHPHEPRHLKDVILLTAMVQVLSCFSLYVWYFWLLAPGRALY 144

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Match: TM208_DICDI (Transmembrane protein 208 homolog OS=Dictyostelium discoideum GN=tmem208 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.203e-11
Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 3

Query:   63 YVVIRMLIFHSSITWKHWIGLAVTSL--AYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQ 359
            Y++ R+ ++HS  T+  W+  A  SL     F Y  +  M   +Y  +GEL+DGG D+  GG+  Y  D+IY+   +Q   +IS K  Y+ LVIPAF  ++
Sbjct:   31 YILYRV-VYHSE-TFGGWLWFAYLSLNALNMFAYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLILVIPAFAIFK 129

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: C6SXP6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.562e-61
Identity = 117/163 (71.78%), Postives = 123/163 (75.46%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN             CNVIYV++RML+FHSS TWKHWIGL VTSLAY  PYQQLAKMA P+YAEDGELLDGGFDM+TGGVCGYLHDVIYIT FVQV SI+SGKFWY YLVIPAFGAYQSFG IKGFLP GSEES                ASRPKF KTRTR
Sbjct:   11 EENARHMARLRQIIIACNVIYVLLRMLVFHSSFTWKHWIGLIVTSLAYVIPYQQLAKMATPAYAEDGELLDGGFDMSTGGVCGYLHDVIYITCFVQVMSIVSGKFWYTYLVIPAFGAYQSFGFIKGFLPWGSEESFEDEKTRKKREKMEKKASRPKFAKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: C6T2G4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.169e-60
Identity = 115/163 (70.55%), Postives = 123/163 (75.46%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN             CNVIYV++RML+FHSS TWKHWIGL VTSLAY  PYQQLAKMA P+YAEDGELLDGGFDM+TGGVCGYLHDVIYIT FVQV SI+SGKFW+ YLVIPAFGAY+SFG IKGFLP GSEES                ASRPKF KTRTR
Sbjct:   11 EENARHMARLRQIIIACNVIYVLLRMLVFHSSFTWKHWIGLIVTSLAYVIPYQQLAKMATPAYAEDGELLDGGFDMSTGGVCGYLHDVIYITCFVQVMSIVSGKFWFTYLVIPAFGAYKSFGFIKGFLPGGSEESFEDEKTRKKREKMEKKASRPKFAKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: B9IM83_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_737919 PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.219e-56
Identity = 104/163 (63.80%), Postives = 122/163 (74.85%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN             CNVIYV++R++IFHSS TWKHWIGL +TS+AY+ PY+QLA MA+P+YA+DG+LLDGG+DM+TGG+CGYLHDVIYITSFVQ+ SIISGKFWY YLVIPAFGAY+SFG  +GFL  GSEE                 ASR KFVKTRTR
Sbjct:   11 EENSRHMANLRRLIIACNVIYVLVRLVIFHSSFTWKHWIGLILTSVAYFIPYRQLAAMASPAYADDGDLLDGGYDMSTGGICGYLHDVIYITSFVQLMSIISGKFWYTYLVIPAFGAYKSFGFFRGFLSNGSEEGAEDEKTRKKREKLEKKASRGKFVKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: B9T5B1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0048200 PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.961e-54
Identity = 102/163 (62.58%), Postives = 119/163 (73.01%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN             CNVIY ++R+LIFHS+ TWKHW+GL +TS+AY+ PYQQL  MA P+YA+DGEL+DGGFDM+TGG+CGYLHD+IYITSFVQ+ SIIS KFWY YLVIPAFGAYQSFG I+GFL QGSE +                ASR KFVKTR R
Sbjct:   11 EENARHMAKLRHLIIACNVIYFLVRILIFHSTFTWKHWMGLVLTSVAYFIPYQQLDAMARPAYADDGELIDGGFDMSTGGICGYLHDIIYITSFVQLMSIISEKFWYTYLVIPAFGAYQSFGFIRGFLSQGSEGTEEDEKTRKKREKMEKRASRAKFVKTRNR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: D7LG41_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900881 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.708e-52
Identity = 102/163 (62.58%), Postives = 116/163 (71.17%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN              N +Y V+RMLIF+SS TWKHWIGL +TSLAY FPY+QL +MA PS  +DGELLDGGFDMTTGG+CGYLHDVIYIT FVQ+ASIISGKFWY YLVIPAFG Y++ GLI+GF+ QGSE  V               ASR + VKTRTR
Sbjct:   11 EENARHMAKLRRLIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAFPYKQLDQMAKPSVTDDGELLDGGFDMTTGGICGYLHDVIYITCFVQLASIISGKFWYTYLVIPAFGVYKASGLIRGFMSQGSEGGVEDDKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: Q8LEX3_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 6.324e-52
Identity = 101/163 (61.96%), Postives = 116/163 (71.17%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN              N +Y V+RMLIF+SS TWKHWIGL +TSLAY FPY+QL +MA PS  +DGEL+DGGFDMTTGG+CGYLHDVIYIT FVQ+ASIISGKFWY YLVIPAFG Y++ GLI+GF+ QGSE  V               ASR + VKTRTR
Sbjct:   11 EENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAFPYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIISGKFWYTYLVIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: Q8GYK4_ARATH (Putative uncharacterized protein At2g23940 OS=Arabidopsis thaliana GN=At2g23940 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.409e-51
Identity = 100/163 (61.35%), Postives = 116/163 (71.17%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN              N +Y V+RMLIF+SS TWKHWIGL +TSLAY FPY+QL +MA PS  +DGEL+DGGFDMTTGG+CGYLHDVIYIT FVQ+ASII+GKFWY YLVIPAFG Y++ GLI+GF+ QGSE  V               ASR + VKTRTR
Sbjct:   11 EENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAFPYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYLVIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: O82222_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g23940/T29E15.14 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.409e-51
Identity = 100/163 (61.35%), Postives = 116/163 (71.17%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN              N +Y V+RMLIF+SS TWKHWIGL +TSLAY FPY+QL +MA PS  +DGEL+DGGFDMTTGG+CGYLHDVIYIT FVQ+ASII+GKFWY YLVIPAFG Y++ GLI+GF+ QGSE  V               ASR + VKTRTR
Sbjct:   11 EENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAFPYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYLVIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: D7T0F4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_69.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033204001 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.548e-49
Identity = 96/163 (58.90%), Postives = 112/163 (68.71%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN             CNVIYV++RML F+S+ TWKHWIGL +T+ AY  PY+QLA MA P+Y +DGELLDGGFDM+TGGVCGYLHDVIYITSFVQ+ SIIS KFWY YLVIPAF  Y+ F L +GFL Q SE +                AS+ K +KTRTR
Sbjct:   11 EENSRHMTKLLRLIIACNVIYVLVRMLFFYSTFTWKHWIGLLLTTAAYVIPYRQLASMAKPAYHDDGELLDGGFDMSTGGVCGYLHDVIYITSFVQIMSIISEKFWYTYLVIPAFAGYKIFRLTRGFLSQSSEGATEDEKTRKKREKMERKASKVKIMKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Match: D7MBV3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_353759 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.458e-48
Identity = 93/147 (63.27%), Postives = 111/147 (75.51%), Query Frame = 3

Query:   51 CNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            CN++YV++R++I HSS TWKHWIGL VTSL Y  PY+ L +MA PS ++DGELLDGGFDM+TGG+CGYLHDV+YIT FVQ+ SIISGKFWY YLVIPAFGAY++ GLIKG L  GSE  V               ASR + VKTR+R
Sbjct:   27 CNILYVIVRVIISHSSHTWKHWIGLVVTSLGYAIPYKLLDQMAKPSVSDDGELLDGGFDMSTGGMCGYLHDVLYITCFVQLGSIISGKFWYAYLVIPAFGAYKASGLIKGLLSHGSEGGVEDEKTRKKREKMEKKASRGQVVKTRSR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TAIR peptide
Match: AT2G23940.1 (| Symbols: | Protein of unknown function (DUF788) | chr2:10184199-10185097 FORWARD LENGTH=173)

HSP 1 Score: 206.838 bits (525), Expect = 9.484e-54
Identity = 100/163 (61.35%), Postives = 116/163 (71.17%), Query Frame = 3

Query:    3 EENXXXXXXXXXXXXXCNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            EEN              N +Y V+RMLIF+SS TWKHWIGL +TSLAY FPY+QL +MA PS  +DGEL+DGGFDMTTGG+CGYLHDVIYIT FVQ+ASII+GKFWY YLVIPAFG Y++ GLI+GF+ QGSE  V               ASR + VKTRTR
Sbjct:   11 EENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAFPYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYLVIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Pisum_sativum_v1_Contig5 vs. TAIR peptide
Match: AT4G30500.1 (| Symbols: | Protein of unknown function (DUF788) | chr4:14903558-14904764 FORWARD LENGTH=173)

HSP 1 Score: 186.808 bits (473), Expect = 1.016e-47
Identity = 90/147 (61.22%), Postives = 109/147 (74.15%), Query Frame = 3

Query:   51 CNVIYVVIRMLIFHSSITWKHWIGLAVTSLAYYFPYQQLAKMANPSYAEDGELLDGGFDMTTGGVCGYLHDVIYITSFVQVASIISGKFWYIYLVIPAFGAYQSFGLIKGFLPQGSEESVXXXXXXXXXXXXXXXASRPKFVKTRTR 491
            CN++YV++R++I HSS TWK+WIGL +TSL Y  PY+ L +MA PS ++ GELLDGGFDM+T G+CGYLHDV+YIT FVQV SIISGKFWY YLVIPAFGAY++ GLIKG L  GSE  V               ASR + VKTR+R
Sbjct:   27 CNILYVLVRVIISHSSHTWKNWIGLVLTSLGYGIPYKLLHQMAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKFWYAYLVIPAFGAYKASGLIKGLLSHGSEGGVEDEKTRKKREKMERKASRGQVVKTRSR 173

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig5 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig5 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
TM208_DANRE	4.859e-17	37.39	Transmembrane protein 208 OS=Danio rerio GN=tmem20...	[more]
TM208_MOUSE	9.482e-13	32.77	Transmembrane protein 208 OS=Mus musculus GN=Tmem2...	[more]
TM208_BOVIN	2.112e-12	31.93	Transmembrane protein 208 OS=Bos taurus GN=TMEM208...	[more]
TM208_HUMAN	2.759e-12	31.93	Transmembrane protein 208 OS=Homo sapiens GN=TMEM2...	[more]
TM208_XENLA	3.603e-12	31.93	Transmembrane protein 208 OS=Xenopus laevis GN=tme...	[more]
TM208_CHICK	3.984e-11	28.91	Transmembrane protein 208 OS=Gallus gallus GN=TMEM...	[more]
TM208_DICDI	5.203e-11	36.63	Transmembrane protein 208 homolog OS=Dictyostelium...	[more]

BLAST of Pisum_sativum_v1_Contig5 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SXP6_SOYBN	2.562e-61	71.78	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T2G4_SOYBN	2.169e-60	70.55	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9IM83_POPTR	7.219e-56	63.80	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9T5B1_RICCO	3.961e-54	62.58	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7LG41_ARALY	3.708e-52	62.58	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q8LEX3_ARATH	6.324e-52	61.96	Putative uncharacterized protein OS=Arabidopsis th...	[more]
Q8GYK4_ARATH	1.409e-51	61.35	Putative uncharacterized protein At2g23940 OS=Arab...	[more]
O82222_ARATH	1.409e-51	61.35	Expressed protein OS=Arabidopsis thaliana GN=At2g2...	[more]
D7T0F4_VITVI	8.548e-49	58.90	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7MBV3_ARALY	1.458e-48	63.27	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of Pisum_sativum_v1_Contig5 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G23940.1	9.484e-54	61.35	\| Symbols: \| Protein of unknown function (DUF788)...	[more]
AT4G30500.1	1.016e-47	61.22	\| Symbols: \| Protein of unknown function (DUF788)...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	Protein of unknown function DUF788, TMEM208	PANTHER	PTHR13505	FAMILY NOT NAMED	coord: 1..163 score: 3.7e
IPR008506	Protein of unknown function DUF788, TMEM208	PFAM	PF05620	DUF788	coord: 1..153 score: 5.5
None	No IPR available	PANTHER	PTHR13505:SF2	SUBFAMILY NOT NAMED	coord: 1..163 score: 3.7e
None	No IPR available	SEG	seg	seg	coord: 4..16 score: NAcoord: 137..151 score
None	No IPR available	SEG	seg	seg	coord: 45..59 score
None	No IPR available	SEG	seg	seg	coord: 22..36 score: NAcoord: 39..51 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig5 ID=Pisum_sativum_v1_Contig5; Name=Pisum_sativum_v1_Contig5; organism=Pisum sativum; type=contig; length=721bp
AGGAAGAGAACGCTCGTCACATGGCTAGGATCCGCCACATCATCATCGCC
TGCAACGTTATTTATGTAGTGATTAGGATGTTAATCTTTCATTCCAGCAT
CACCTGGAAGCATTGGATTGGCCTTGCTGTGACTTCTCTAGCATACTATT
TTCCCTATCAACAACTTGCTAAAATGGCAAACCCTAGTTACGCCGAAGAT
GGTGAGCTTTTAGACGGTGGGTTTGATATGACTACGGGTGGAGTTTGCGG
CTATTTACACGATGTTATCTATATAACAAGCTTTGTGCAAGTTGCGTCCA
TCATCTCTGGAAAGTTCTGGTACATATATCTTGTGATACCAGCATTTGGA
GCATACCAATCCTTTGGCTTAATTAAAGGATTTTTGCCACAAGGTTCAGA
GGAGTCCGTTGAAGATGAAAAGACCCGCAAGAAAAGGGAAAAGCTGGAGA
AGAAGGCATCCAGACCTAAGTTTGTCAAGACACGAACTAGATAGTTTGCT
GGAACAGAAACCAGTTGCAAAATATCGCCCACATATCCCAGATTGATGCA
GCTTCCCTGTAACTTTAAGTTATTACATGTTTCATTTTACACTGAGTTAG
TTTTTCATGTACAACAATTTCTTTTTTTATGCCCCTCCATTTAGGGAAAG
AAACTACAAGAGCATGTATCATCCTTTACACAGTTTACAAAAGTGTCTGT
AAGAGCTGACATTTATGGGAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR008506	SND2/TMEM208

Search form

Pisum_sativum_v1_Contig5