Pisum_sativum_v1_Contig554

Contig Overview


Name	Pisum_sativum_v1_Contig554
Unique Name	Pisum_sativum_v1_Contig554
Type	contig
Organism	Pisum sativum (pea)
Sequence length	760

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
FG530514	EST	FG530514:1..637 +	Pisum sativum unigene v1	n/a
EX569524	EST	EX569524:1..760 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FG530514	FG530514	Pisum sativum	EST
EX569524	EX569524	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: B7FFF0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.195e-53
Identity = 110/132 (83.33%), Postives = 115/132 (87.12%), Query Frame = 1

Query:  100 MAVPAPTSPLCLRHLHTNNRIFRHQTSFLTPSRNNKLPLTVVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFA 495
            MAVPAPTS L L+ +HTN+R  RH  SF TPS     P TV AMAPKNKVNKYNDNWKK+WFGAGIFYEGSEEVEVDVFKK+EKRKVLSNVEKAGLLSKAEE GVTLSSIEKLGLFSKAEELGLLSLLEK A
Sbjct:    1 MAVPAPTSALYLQPIHTNHRTLRHYRSFPTPSNK---PFTVFAMAPKNKVNKYNDNWKKQWFGAGIFYEGSEEVEVDVFKKLEKRKVLSNVEKAGLLSKAEEFGVTLSSIEKLGLFSKAEELGLLSLLEKLA 129

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: B7FKD0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.573e-51
Identity = 107/132 (81.06%), Postives = 112/132 (84.85%), Query Frame = 1

Query:  100 MAVPAPTSPLCLRHLHTNNRIFRHQTSFLTPSRNNKLPLTVVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFA 495
            MAVPAPTS L L+ +HTN+R  RH  SF TPS     P TV AMAPKNKVNKYNDNWKK+WFGAGIFYEGSEEVEVDVFKK+EKRKVLSNVEKAGLLSKAEE GVTL SIEKLG F KAEELGLLSLLEK A
Sbjct:    1 MAVPAPTSALYLQPIHTNHRTLRHYRSFPTPSNK---PFTVFAMAPKNKVNKYNDNWKKQWFGAGIFYEGSEEVEVDVFKKLEKRKVLSNVEKAGLLSKAEEFGVTLFSIEKLGFFFKAEELGLLSLLEKLA 129

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: B9R945_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1513690 PE=4 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.131e-40
Identity = 96/164 (58.54%), Postives = 112/164 (68.29%), Query Frame = 1

Query:  103 AVPAPTSPLCLRHLHTNNRIFRHQTSFLTPSRNNKLP----LTVVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDS 582
            AV  P+S   LR L       RH +   +P  + + P    LT+VAMAP+ KVNKY+D W+K+WFGAGIFYE SEE+E+DVFKK+EKRKVLSNVEKAGLLSKAEELG+TLSSIEKLG+FSKAEELGLLSLLEK A+                       IPDDS
Sbjct:    5 AVAPPSSAANLRPLQ------RHPSFSPSPRFSRRFPAKQSLTIVAMAPQKKVNKYDDGWQKKWFGAGIFYESSEELEMDVFKKLEKRKVLSNVEKAGLLSKAEELGITLSSIEKLGVFSKAEELGLLSLLEKTASLSPSILASAALPVFVAALAAVVIIPDDS 162

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: A9PJV1_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.131e-40
Identity = 102/164 (62.20%), Postives = 112/164 (68.29%), Query Frame = 1

Query:  100 MAVPAP--TSPLCLRHLHTNNRIFRHQTS-FLTPSRNNKLPLTVVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDS 582
            MAV AP  TS   LR   TN   F    S F   S   +L LT+VAMAP+ KVNKY+ NWKK+W+GAGIFYE SEEVE DVFKK+EKRKVLSNVEKAGLLSKAEELGVTLSSIEKLG+FSKAE+LGLLSLLEK A+                       IPDDS
Sbjct:    1 MAVRAPLITSAAYLRG--TNGPHFLTSKSRFGLQSPTKQLALTIVAMAPQKKVNKYDGNWKKQWYGAGIFYEDSEEVEFDVFKKLEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGVFSKAEQLGLLSLLEKTASVSPSTLASAALPILVAAVVAIVVIPDDS 162

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: B9I306_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1095368 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 6.201e-40
Identity = 91/148 (61.49%), Postives = 108/148 (72.97%), Query Frame = 1

Query:  139 HLHTNNRIFRHQTSFLTPSRNNKLPLTVVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDS 582
            H HT+   F  Q+    P++  +L LT+VAMAPK KVNK++++WKK+W+GAGIF+EGSEE+E DVFKK+EKRKVLSNVEKAGLLSKAEELG TLSSIEKLG+FSKAEELGLLSLLEK A+                       IPDDS
Sbjct:   21 HFHTSKSRFGLQS----PAK--QLALTIVAMAPKKKVNKFDESWKKQWYGAGIFFEGSEEIEFDVFKKLEKRKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKTASFSPSTLASAALPIMVAAVVAIVVIPDDS 162

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: B9N497_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_267391 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.581e-38
Identity = 84/121 (69.42%), Postives = 93/121 (76.86%), Query Frame = 1

Query:  220 VVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDS 582
            +VAMAP+ KVNKY+ NWKK+W+GAGIFYE SEEVE DVFKK+EKRKVLSNVEKAGLLSKAEELGVTLSSIEKLG+FSKAE+LGLLSLLEK A+                       IPDDS
Sbjct:    1 IVAMAPQKKVNKYDGNWKKQWYGAGIFYEDSEEVEFDVFKKLEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGVFSKAEQLGLLSLLEKTASVSPSTLASAALPILVAAVVAIVVIPDDS 121

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: A5C347_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012441 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.581e-38
Identity = 84/126 (66.67%), Postives = 95/126 (75.40%), Query Frame = 1

Query:  205 KLPLTVVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDS 582
            K PL ++AMA K KVN+Y++NWKKEWFGAGIF EGSEEVEVDVFK +EK+KVLSNVEK+GLLSKAEELG TLSSIEKLG+FSKAE+LGLLSLLEK A+                       IPDDS
Sbjct:   33 KKPLRILAMASKKKVNRYDENWKKEWFGAGIFVEGSEEVEVDVFKNLEKKKVLSNVEKSGLLSKAEELGFTLSSIEKLGVFSKAEDLGLLSLLEKAASFSPSALASAALPIFVAAIAAIVLIPDDS 158

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: A9NZ32_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.433e-36
Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 1

Query:  205 KLPLTVVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDS 582
            + PL ++AMAPK KVNKY+DNWKK+WFGAGIF EG E+V+VD+ KK+EKRKVLS VEKAGLLSKA+ELG++LSSIEK+GL SKAE+LGLLSL EK A+                       IPDDS
Sbjct:   51 RAPLLILAMAPKKKVNKYDDNWKKQWFGAGIFLEGDEDVDVDIIKKLEKRKVLSGVEKAGLLSKADELGLSLSSIEKMGLLSKAEDLGLLSLAEKVASISPAAMASVSLPLVVAAIATIVLIPDDS 176

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: D7KS46_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476610 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.599e-35
Identity = 87/155 (56.13%), Postives = 104/155 (67.10%), Query Frame = 1

Query:  139 HLHT----NNRIFRHQTSFLTPSRNNKLPLT--VVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDST 585
            HL T    N  + R + SF T     K P T  VV+MAP+ KVNKY+  WKK+W+GAG+F+EGSE++ VDVFKK+EKRKVLSNVEK+GLLSKAEELG+TLSS+EKL +FSKAE+LGLLSLLE  A                        IPDDST
Sbjct:   14 HLQTKFISNPILPRFRRSFST----GKAPATFSVVSMAPQKKVNKYDAKWKKQWYGAGLFFEGSEQINVDVFKKLEKRKVLSNVEKSGLLSKAEELGLTLSSLEKLKVFSKAEDLGLLSLLENLAGTSPAVLASAALPALTAAIVAVVLIPDDST 164

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Match: Q9SSF7_ARATH (F25A4.30 protein OS=Arabidopsis thaliana GN=F25A4.30 PE=4 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 6.006e-35
Identity = 89/171 (52.05%), Postives = 112/171 (65.50%), Query Frame = 1

Query:   79 SSINHLSMAVPAPTSPLCLRHLHTNNRIFRHQTSFLTPSRNNKLPLT--VVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDST 585
            SS+  +   + +P + L  + L +N  + R + SF T     K P T  VVAMAP+ KVNKY+  WKK+W+GAG+F+EGSE++ VDVFKK+EKRKVLSNVEK+GLLSKAE LG+TLSS+EKL +FSKAE+LGLLSLLE  A                        IPDDST
Sbjct: 1077 SSMAVVGAPISSPAAQLQTQFL-SNPILPRFRRSFST----GKSPATFSVVAMAPQKKVNKYDAKWKKQWYGAGLFFEGSEQINVDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLENLAGTSPAVLASAALPALTAAIVAVVLIPDDST 1242

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TAIR peptide
Match: AT1G74730.1 (| Symbols: | Protein of unknown function (DUF1118) | chr1:28078995-28079831 FORWARD LENGTH=198)

HSP 1 Score: 150.599 bits (379), Expect = 8.776e-37
Identity = 87/162 (53.70%), Postives = 108/162 (66.67%), Query Frame = 1

Query:  106 VPAPTSPLCLRHLHTNNRIFRHQTSFLTPSRNNKLPLT--VVAMAPKNKVNKYNDNWKKEWFGAGIFYEGSEEVEVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLSLLEKFATXXXXXXXXXXXXXXXXXXXXXXXIPDDST 585
            + +P + L  + L +N  + R + SF T     K P T  VVAMAP+ KVNKY+  WKK+W+GAG+F+EGSE++ VDVFKK+EKRKVLSNVEK+GLLSKAE LG+TLSS+EKL +FSKAE+LGLLSLLE  A                        IPDDST
Sbjct:    8 ISSPAAQLQTQFL-SNPILPRFRRSFST----GKSPATFSVVAMAPQKKVNKYDAKWKKQWYGAGLFFEGSEQINVDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLENLAGTSPAVLASAALPALTAAIVAVVLIPDDST 164

[Close]

BLAST of Pisum_sativum_v1_Contig554 vs. TAIR peptide
Match: AT5G08050.1 (| Symbols: | Protein of unknown function (DUF1118) | chr5:2578418-2578964 FORWARD LENGTH=158)

HSP 1 Score: 57.7658 bits (138), Expect = 7.742e-9
Identity = 28/52 (53.85%), Postives = 41/52 (78.85%), Query Frame = 1

Query:  322 EVDVFKKIEKRKVLSNVEKAGLLSKAEELGVTLSSIEKLGLFSKAEELGLLS 477
            +V +  ++E+ K+L+  EKAGLLS AE+ G +LS+IE+LGL +KAEE G+LS
Sbjct:   39 QVKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLS 90

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig554 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig554 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FFF0_MEDTR	2.195e-53	83.33	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FKD0_MEDTR	1.573e-51	81.06	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9R945_RICCO	2.131e-40	58.54	Putative uncharacterized protein OS=Ricinus commun...	[more]
A9PJV1_9ROSI	2.131e-40	62.20	Putative uncharacterized protein OS=Populus tricho...	[more]
B9I306_POPTR	6.201e-40	61.49	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9N497_POPTR	7.581e-38	69.42	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A5C347_VITVI	7.581e-38	66.67	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A9NZ32_PICSI	5.433e-36	61.90	Putative uncharacterized protein OS=Picea sitchens...	[more]
D7KS46_ARALY	4.599e-35	56.13	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9SSF7_ARATH	6.006e-35	52.05	F25A4.30 protein OS=Arabidopsis thaliana GN=F25A4....	[more]

BLAST of Pisum_sativum_v1_Contig554 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G74730.1	8.776e-37	53.70	\| Symbols: \| Protein of unknown function (DUF1118...	[more]
AT5G08050.1	7.742e-9	53.85	\| Symbols: \| Protein of unknown function (DUF1118...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 102..217 score: 1.8
None	No IPR available	SEG	seg	seg	coord: 155..177 score: NAcoord: 184..213 score
None	No IPR available	SEG	seg	seg	coord: 34..56 score
None	No IPR available	SEG	seg	seg	coord: 36..50 score
None	No IPR available	SEG	seg	seg	coord: 8..28 score: NAcoord: 81..99 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig554 ID=Pisum_sativum_v1_Contig554; Name=Pisum_sativum_v1_Contig554; organism=Pisum sativum; type=contig; length=760bp
AACGCAAATGTCTATCTCACTACTTTACTCTGTTGATTATCCGACGTGGC
AGTTGAGATTGAGATTCAAGCGCGCGCATCATCAATCAATCATCTATCCA
TGGCGGTGCCTGCTCCAACCTCACCTCTCTGTCTTCGTCATCTTCACACA
AACAACCGCATCTTCCGTCACCAAACCTCATTCCTCACTCCCTCCCGTAA
CAACAAACTACCTCTAACCGTCGTCGCCATGGCTCCCAAAAACAAGGTGA
ACAAGTACAACGACAACTGGAAGAAAGAATGGTTCGGAGCGGGGATATTC
TACGAGGGAAGCGAAGAGGTTGAAGTCGACGTATTCAAGAAAATCGAGAA
GAGGAAAGTTTTGAGCAACGTGGAGAAAGCAGGGTTGTTATCCAAAGCTG
AGGAGTTAGGCGTAACGCTATCTTCTATTGAGAAGTTAGGTTTGTTTTCC
AAGGCGGAAGAGCTTGGTTTACTCAGCTTATTGGAGAAATTCGCCACTGT
TTCTCCTTCTGTTTTGGCTTCTCTTTCGCTTCCTGTGCTTGTTGCTGCTG
TTGCCGCGGTTGTTCTGATTCCGGATGATTCTACTGCTCTGGTTGTAGTT
CAGGCCGTCGTGGCGGCGGTTCTTGGTGTCGGCGCTGTTGGTTTGTTCGC
TGGGTCGGTTGTGCTAGGTGGTTTGCAAGAGGCTGATTGATTGGTTCAGT
ATAAACGTTTTTTTTTACTGTGGTTGTTTTTTATGTAATTACATTGTAGT
AATACTTTAC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR009500	DUF1118

Search form

Pisum_sativum_v1_Contig554