Pisum_sativum_v1_Contig715

Contig Overview


Name	Pisum_sativum_v1_Contig715
Unique Name	Pisum_sativum_v1_Contig715
Type	contig
Organism	Pisum sativum (pea)
Sequence length	608

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
FG531930	EST	FG531930:5..363 +	Pisum sativum unigene v1	n/a
EX569081	EST	EX569081:9..504 +	Pisum sativum unigene v1	n/a
EX569099	EST	EX569099:66..567 +	Pisum sativum unigene v1	n/a
EX569096	EST	EX569096:64..559 +	Pisum sativum unigene v1	n/a
EX569098	EST	EX569098:64..568 +	Pisum sativum unigene v1	n/a
EX569097	EST	EX569097:64..568 +	Pisum sativum unigene v1	n/a
EX569095	EST	EX569095:55..568 +	Pisum sativum unigene v1	n/a
EX569089	EST	EX569089:5..567 +	Pisum sativum unigene v1	n/a
EX569093	EST	EX569093:12..568 +	Pisum sativum unigene v1	n/a
EX569090	EST	EX569090:10..568 +	Pisum sativum unigene v1	n/a
FG534183	EST	FG534183:1..608 +	Pisum sativum unigene v1	n/a
FG528946	EST	FG528946:3..608 +	Pisum sativum unigene v1	n/a
FG528898	EST	FG528898:3..603 +	Pisum sativum unigene v1	n/a
FG534080	EST	FG534080:5..608 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FG531930	FG531930	Pisum sativum	EST
EX569081	EX569081	Pisum sativum	EST
EX569099	EX569099	Pisum sativum	EST
EX569096	EX569096	Pisum sativum	EST
EX569098	EX569098	Pisum sativum	EST
EX569097	EX569097	Pisum sativum	EST
EX569095	EX569095	Pisum sativum	EST
EX569089	EX569089	Pisum sativum	EST
EX569093	EX569093	Pisum sativum	EST
EX569090	EX569090	Pisum sativum	EST
FG534183	FG534183	Pisum sativum	EST
FG528946	FG528946	Pisum sativum	EST
FG528898	FG528898	Pisum sativum	EST
FG534080	FG534080	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A2_PEA (Histone H2A.2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.761e-40
Identity = 85/108 (78.70%), Postives = 87/108 (80.56%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNEN 382
            VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAP                  GNAARDNKK  ISPRHLLLAVRNDVELGKLLAGVTIA+GGVLPNINPVLLPKR E+
Sbjct:   24 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTES 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A1_PEA (Histone H2A.1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.494e-39
Identity = 84/108 (77.78%), Postives = 86/108 (79.63%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNEN 382
            VTRSVRAGLQFPVGR+GRFLKKGRYAQRVGTGAP                  GNAARDNKK  ISPRHLLLAVRND ELGKLLAGVTIA+GGVLPNINPVLLPKR EN
Sbjct:   24 VTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLLPKRKEN 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.807e-38
Identity = 80/107 (74.77%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            VTRS+RAGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRHLLLAVRND ELGKLLAGVTIAHGGVLPNINP+LLPK+ E
Sbjct:   25 VTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTE 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.807e-38
Identity = 80/107 (74.77%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            VTRS RAGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINP+LLPK+NE
Sbjct:   23 VTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNE 129

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.200e-38
Identity = 80/107 (74.77%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            VTRS+RAGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.066e-37
Identity = 79/105 (75.24%), Postives = 82/105 (78.10%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            VTRSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRHLLLAVRND ELGKLLAGVT AHGGVLPNINPVLLPK+
Sbjct:   23 VTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKK 127

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.066e-37
Identity = 79/107 (73.83%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV+AGLQFPVGRIGRFLKKGRYAQRVG+GAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAE 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.020e-36
Identity = 77/105 (73.33%), Postives = 83/105 (79.05%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   26 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.020e-36
Identity = 77/105 (73.33%), Postives = 83/105 (79.05%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   26 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.638e-36
Identity = 76/105 (72.38%), Postives = 83/105 (79.05%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RSV+AGLQFPVGRIGR+LKKGRYAQR+GTGAP                  GNAARDNKK  I PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   29 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 133

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: B9T4D5_RICCO (Histone H2A OS=Ricinus communis GN=RCOM_0390300 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.834e-37
Identity = 81/107 (75.70%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            VTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: B9T4D3_RICCO (Histone H2A OS=Ricinus communis GN=RCOM_0390180 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.834e-37
Identity = 81/107 (75.70%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            VTRSVRAGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: C6SZZ2_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.726e-36
Identity = 79/107 (73.83%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: C6SWA6_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.726e-36
Identity = 79/107 (73.83%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: C6TG01_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.767e-36
Identity = 78/107 (72.90%), Postives = 85/107 (79.44%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV+AGLQFPVGRIGR+LK+GRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK++E
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKRGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSE 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: C6TMV8_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.276e-35
Identity = 78/107 (72.90%), Postives = 84/107 (78.50%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ +
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTQ 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: B6T3J3_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.666e-35
Identity = 77/105 (73.33%), Postives = 84/105 (80.00%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAA+DNKK  I PRHLLLA+RNDVELGKLL+GVTIAHGGVLPNINPVLLPK+
Sbjct:   27 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHLLLAIRNDVELGKLLSGVTIAHGGVLPNINPVLLPKK 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: B6T101_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.666e-35
Identity = 77/105 (73.33%), Postives = 84/105 (80.00%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAA+DNKK  I PRH+LLA+RNDVELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   27 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHVLLAIRNDVELGKLLAGVTIAHGGVLPNINPVLLPKK 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: B6T0Q2_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.666e-35
Identity = 77/105 (73.33%), Postives = 84/105 (80.00%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RSV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP                  GNAA+DNKK  I PRH+LLA+RNDVELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   27 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHVLLAIRNDVELGKLLAGVTIAHGGVLPNINPVLLPKK 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Match: A5BE97_VITVI (Histone H2A OS=Vitis vinifera GN=VITISV_009336 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.176e-35
Identity = 77/107 (71.96%), Postives = 85/107 (79.44%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV+AGLQFPVGRIGR+LKKGRY+QRVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+++
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSD 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT5G02560.1 (| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=153)

HSP 1 Score: 146.362 bits (368), Expect = 1.154e-35
Identity = 73/107 (68.22%), Postives = 83/107 (77.57%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV++GLQFPVGRIGR+LKKGRY++RVGTGAP                  GNAARDNKK  I PRH+LLAVRND ELG LL GVTIAHGGVLPNINP+LLPK++E
Sbjct:   25 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSE 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT5G59870.1 (| Symbols: HTA6 | histone H2A 6 | chr5:24115605-24116144 REVERSE LENGTH=150)

HSP 1 Score: 141.354 bits (355), Expect = 3.711e-34
Identity = 72/106 (67.92%), Postives = 81/106 (76.42%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRN 376
            V++S++AGLQFPVGRI RFLKKGRYAQR+G GAP                  GNAARDNKK  I PRHLLLA+RND ELGKLL+GVTIAHGGVLPNIN VLLPK++
Sbjct:   25 VSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKS 130

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT5G27670.1 (| Symbols: HTA7 | histone H2A 7 | chr5:9792807-9793365 REVERSE LENGTH=150)

HSP 1 Score: 136.346 bits (342), Expect = 1.194e-32
Identity = 69/106 (65.09%), Postives = 79/106 (74.53%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRN 376
            V++SV+AGLQFPVGRI R+LKKGRYA R G+GAP                  GNAARDNKK  I+PRHL LA+RND ELG+LL GVTIA GGVLPNINPVLLPK++
Sbjct:   26 VSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS 131

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT5G02560.2 (| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=177)

HSP 1 Score: 132.88 bits (333), Expect = 1.320e-31
Identity = 73/131 (55.73%), Postives = 83/131 (63.36%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXX------------------------GNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 379
            V+RSV++GLQFPVGRIGR+LKKGRY++RVGTGAP                                          GNAARDNKK  I PRH+LLAVRND ELG LL GVTIAHGGVLPNINP+LLPK++E
Sbjct:   25 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSE 155

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT1G51060.1 (| Symbols: HTA10 | histone H2A 10 | chr1:18926948-18927443 FORWARD LENGTH=132)

HSP 1 Score: 125.946 bits (315), Expect = 1.613e-29
Identity = 65/104 (62.50%), Postives = 74/104 (71.15%), Query Frame = 2

Query:   62 TRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            TRS +AGLQFPVGRI RFLKKG+YA+RVG GAP                  GNAARDNKK  I PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   18 TRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT1G08880.1 (| Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | Histone superfamily protein | chr1:2847144-2847676 REVERSE LENGTH=142)

HSP 1 Score: 123.25 bits (308), Expect = 1.046e-28
Identity = 64/105 (60.95%), Postives = 72/105 (68.57%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RS +AGLQFPVGRI RFLK G+YA+RVG GAP                  GNAARDNKK  I PRH+ LAVRND EL KLL  VTIA+GGVLPNI+  LLP +
Sbjct:   23 VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT1G54690.1 (| Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX | gamma histone variant H2AX | chr1:20414607-20415206 REVERSE LENGTH=142)

HSP 1 Score: 122.865 bits (307), Expect = 1.366e-28
Identity = 64/105 (60.95%), Postives = 72/105 (68.57%), Query Frame = 2

Query:   59 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            V+RS +AGLQFPVGRI RFLK G+YA+RVG GAP                  GNAARDNKK  I PRH+ LAVRND EL KLL  VTIA+GGVLPNI+  LLP +
Sbjct:   23 VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT5G54640.1 (| Symbols: HTA1, RAT5, ATHTA1 | Histone superfamily protein | chr5:22196540-22197279 FORWARD LENGTH=130)

HSP 1 Score: 122.094 bits (305), Expect = 2.330e-28
Identity = 63/104 (60.58%), Postives = 73/104 (70.19%), Query Frame = 2

Query:   62 TRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            +RS +AGLQFPVGRI RFLK G+YA+RVG GAP                  GNAARDNKK  I PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   18 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT4G27230.2 (| Symbols: HTA2 | histone H2A 2 | chr4:13637515-13638325 REVERSE LENGTH=131)

HSP 1 Score: 122.094 bits (305), Expect = 2.330e-28
Identity = 63/104 (60.58%), Postives = 73/104 (70.19%), Query Frame = 2

Query:   62 TRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            +RS +AGLQFPVGRI RFLK G+YA+RVG GAP                  GNAARDNKK  I PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   18 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

[Close]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Match: AT4G27230.1 (| Symbols: HTA2 | histone H2A 2 | chr4:13637515-13638325 REVERSE LENGTH=131)

HSP 1 Score: 122.094 bits (305), Expect = 2.330e-28
Identity = 63/104 (60.58%), Postives = 73/104 (70.19%), Query Frame = 2

Query:   62 TRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKSISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 373
            +RS +AGLQFPVGRI RFLK G+YA+RVG GAP                  GNAARDNKK  I PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   18 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig715 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
H2A2_PEA	8.761e-40	78.70	Histone H2A.2 OS=Pisum sativum PE=2 SV=1	[more]
H2A1_PEA	1.494e-39	77.78	Histone H2A.1 OS=Pisum sativum PE=2 SV=1	[more]
H2A3_MEDTR	4.807e-38	74.77	Probable histone H2A.3 OS=Medicago truncatula PE=3...	[more]
H2A1_MEDTR	4.807e-38	74.77	Probable histone H2A.1 OS=Medicago truncatula GN=M...	[more]
H2A2_MEDTR	8.200e-38	74.77	Probable histone H2A.2 OS=Medicago truncatula GN=M...	[more]
H2A_PETCR	9.066e-37	75.24	Histone H2A OS=Petroselinum crispum PE=2 SV=1	[more]
H2A_EUPES	9.066e-37	73.83	Histone H2A OS=Euphorbia esula PE=2 SV=1	[more]
H2A6_ORYSJ	2.020e-36	73.33	Probable histone H2A.6 OS=Oryza sativa subsp. japo...	[more]
H2A6_ORYSI	2.020e-36	73.33	Probable histone H2A.6 OS=Oryza sativa subsp. indi...	[more]
H2A5_ORYSJ	2.638e-36	72.38	Probable histone H2A.5 OS=Oryza sativa subsp. japo...	[more]

BLAST of Pisum_sativum_v1_Contig715 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9T4D5_RICCO	8.834e-37	75.70	Histone H2A OS=Ricinus communis GN=RCOM_0390300 PE...	[more]
B9T4D3_RICCO	8.834e-37	75.70	Histone H2A OS=Ricinus communis GN=RCOM_0390180 PE...	[more]
C6SZZ2_SOYBN	5.726e-36	73.83	Histone H2A OS=Glycine max PE=2 SV=1	[more]
C6SWA6_SOYBN	5.726e-36	73.83	Histone H2A OS=Glycine max PE=2 SV=1	[more]
C6TG01_SOYBN	9.767e-36	72.90	Histone H2A OS=Glycine max PE=2 SV=1	[more]
C6TMV8_SOYBN	1.276e-35	72.90	Histone H2A OS=Glycine max PE=2 SV=1	[more]
B6T3J3_MAIZE	1.666e-35	73.33	Histone H2A OS=Zea mays PE=2 SV=1	[more]
B6T101_MAIZE	1.666e-35	73.33	Histone H2A OS=Zea mays PE=2 SV=1	[more]
B6T0Q2_MAIZE	1.666e-35	73.33	Histone H2A OS=Zea mays PE=2 SV=1	[more]
A5BE97_VITVI	2.176e-35	71.96	Histone H2A OS=Vitis vinifera GN=VITISV_009336 PE=...	[more]

BLAST of Pisum_sativum_v1_Contig715 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G02560.1	1.154e-35	68.22	\| Symbols: HTA12 \| histone H2A 12 \| chr5:575437-57...	[more]
AT5G59870.1	3.711e-34	67.92	\| Symbols: HTA6 \| histone H2A 6 \| chr5:24115605-24...	[more]
AT5G27670.1	1.194e-32	65.09	\| Symbols: HTA7 \| histone H2A 7 \| chr5:9792807-979...	[more]
AT5G02560.2	1.320e-31	55.73	\| Symbols: HTA12 \| histone H2A 12 \| chr5:575437-57...	[more]
AT1G51060.1	1.613e-29	62.50	\| Symbols: HTA10 \| histone H2A 10 \| chr1:18926948-...	[more]
AT1G08880.1	1.046e-28	60.95	\| Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX \| Histo...	[more]
AT1G54690.1	1.366e-28	60.95	\| Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX \| gamma...	[more]
AT5G54640.1	2.330e-28	60.58	\| Symbols: HTA1, RAT5, ATHTA1 \| Histone superfamil...	[more]
AT4G27230.2	2.330e-28	60.58	\| Symbols: HTA2 \| histone H2A 2 \| chr4:13637515-13...	[more]
AT4G27230.1	2.330e-28	60.58	\| Symbols: HTA2 \| histone H2A 2 \| chr4:13637515-13...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 18..40 score: 1.3e-50coord: 47..62 score: 1.3e-50coord: 62..75 score: 1.3e-50coord: 76..90 score: 1.3e-50coord: 104..122 score: 1.3
IPR002119	Histone H2A	PANTHER	PTHR23430	HISTONE H2A	coord: 12..145 score: 1.1
IPR002119	Histone H2A	SMART	SM00414	no description	coord: 7..127 score: 1.9
IPR002119	Histone H2A	PROSITE	PS00046	HISTONE_H2A	coord: 26..32 score
IPR007125	Histone core	PFAM	PF00125	Histone	coord: 22..95 score: 1.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	no description	coord: 9..128 score: 3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 6..130 score: 4.1
None	No IPR available	SEG	seg	seg	coord: 4..19 score: NAcoord: 54..71 score: NAcoord: 128..145 score
None	No IPR available	SEG	seg	seg	coord: 19..32 score
None	No IPR available	SEG	seg	seg	coord: 6..19 score
None	No IPR available	SEG	seg	seg	coord: 38..52 score
None	No IPR available	SEG	seg	seg	coord: 102..119 score
None	No IPR available	SEG	seg	seg	coord: 12..25 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig715 ID=Pisum_sativum_v1_Contig715; Name=Pisum_sativum_v1_Contig715; organism=Pisum sativum; type=contig; length=608bp
CAAACAAACAAAGAAAGGAGCCGGAGGAAGGAAAGGAGGAGGACCAAGGA
AGAAGGCGGTCACAAGATCCGTCAGAGCCGGACTTCAATTTCCAGTTGGA
AGAATCGGTCGATTCTTGAAGAAAGGTAGATACGCTCAGCGTGTTGGTAC
CGGTGCTCCTGTTTACTTGGCCGCTGTTCTTGAATATCTTGCTGCTGAGG
TTCTTGAGTTGGCTGGAAATGCAGCACGTGATAACAAGAAGAAAAGTATC
AGTCCAAGGCATTTGTTGTTGGCTGTGAGGAACGATGTAGAACTTGGAAA
ATTGCTTGCTGGTGTTACCATTGCTCACGGTGGTGTTCTTCCTAACATCA
ACCCAGTGTTATTGCCCAAGAGAAATGAAAACGCTGCCAGTACTCCCAAG
TCTCCATCAAAGGCCAAGAAATCTCCAAAGAAGGCTTAGATAGATGACTT
TAGATGTTAGGTTTTGTTTCTTCCTTTTTGTTGTGATGATATGTAAAACC
CCTATGATGGAGCAGGGATATATTAACTTATACCAACCGATGTAATTCAA
TAGTCTCTGAATTTTCTGACTAGTATTATTCATCAATGAAAACGATTTGT
TTTCTGTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold

Search form

Pisum_sativum_v1_Contig715