Pisum_sativum_v1_Contig764

Contig Overview
NamePisum_sativum_v1_Contig764
Unique NamePisum_sativum_v1_Contig764
Typecontig
OrganismPisum sativum (pea)
Sequence length772
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FG533890ESTFG533890:1..660 +Pisum sativum unigene v1n/a
CD860237ESTCD860237:438..772 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG533890FG533890Pisum sativumEST
CD860237CD860237Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: C6TM21_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.202e-30
Identity = 67/100 (67.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAEDDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLGIHRDATE 305
            NWAKR KCNICNTNKPGHNE          YK               +AEDDGELYDEFGNLKKKFRAKTQQ+E AR LPGSGRAGWEVE+LGI RDA E
Sbjct:  226 NWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEEEIEETRRRRREAEDDGELYDEFGNLKKKFRAKTQQAEAARGLPGSGRAGWEVEELGIDRDARE 325
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: B9S3N2_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_1385570 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.522e-28
Identity = 65/103 (63.11%), Postives = 71/103 (68.93%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLG-IHRDATEK 308
            NWAKR KCNICNTNKPGHNE          YK               +AE DDGELYDEFGNLKKKFRAKTQQ+E+ RVLPG+GRAGWEVE+LG I RD  E+
Sbjct:  229 NWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEEEIEETRRRRKEAEEDDGELYDEFGNLKKKFRAKTQQAESGRVLPGAGRAGWEVEELGVIDRDGRER 331
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: B9HI59_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_564190 PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.244e-27
Identity = 58/94 (61.70%), Postives = 66/94 (70.21%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAEDDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLGI 287
            NWAKR KCN+CNTNKPGHNE          YK               +AEDDGELYDEFGNLKKKFRAKTQQ+E  +VLPG+GRAGWEVE++G+
Sbjct:  226 NWAKRSKCNVCNTNKPGHNEGGVRGGRGGGYKELDEEELEETKRRRKEAEDDGELYDEFGNLKKKFRAKTQQAEAGKVLPGAGRAGWEVEEIGV 319
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: D7TAD5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010206001 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.061e-27
Identity = 63/103 (61.17%), Postives = 70/103 (67.96%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLGI-HRDATEK 308
            NWAKR KCNICNTNKPGHNE          YK               +AE DDGELYDEFGNLKKKFRAKTQQ+E  +VLPG+GRAGWEVE+LG+  RD  E+
Sbjct:  235 NWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEEELEETKRRRREAEEDDGELYDEFGNLKKKFRAKTQQAEAGQVLPGAGRAGWEVEELGMADRDGRER 337
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: B9HY23_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_881806 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.824e-26
Identity = 60/94 (63.83%), Postives = 65/94 (69.15%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLG 284
            NWAKR+KCNICNTNKPGHNE          YK               +AE DDGELYDEFGNLKKKFRAKTQQ+E  RVL G+GRAGWEVE+LG
Sbjct:  226 NWAKRMKCNICNTNKPGHNEAGVRGGRAGGYKELDEEELEETKRRRKEAEEDDGELYDEFGNLKKKFRAKTQQAEAGRVLLGAGRAGWEVEELG 319
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: Q6YS82_ORYSJ (Os07g0296200 protein OS=Oryza sativa subsp. japonica GN=B1272H04.13-1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.854e-25
Identity = 58/94 (61.70%), Postives = 62/94 (65.96%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLG 284
            NWAKR+KCNICNT KPGHNE          YK               +AE DDGE+YDEFGNLKKKFRAKTQQ+E A  LPGSGRAGWEVE  G
Sbjct:  229 NWAKRMKCNICNTTKPGHNEGGVRGGRGGGYKELDEEELEEVKRRRKEAEEDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVEQRG 322
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: Q69IY8_ORYSJ (RRM-containing RNA-binding protein-like OS=Oryza sativa subsp. japonica GN=B1272H04.13-2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.854e-25
Identity = 58/94 (61.70%), Postives = 62/94 (65.96%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLG 284
            NWAKR+KCNICNT KPGHNE          YK               +AE DDGE+YDEFGNLKKKFRAKTQQ+E A  LPGSGRAGWEVE  G
Sbjct:  195 NWAKRMKCNICNTTKPGHNEGGVRGGRGGGYKELDEEELEEVKRRRKEAEEDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVEQRG 288
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: Q69TN3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OSJNBa0062A09.7 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.387e-24
Identity = 56/91 (61.54%), Postives = 61/91 (67.03%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVE 275
            NWAKR+KCNICNT KPGHNE          YK               +AE DDGE+YDEFGNLKKKFRAKTQQ+E A  LPGSGRAGWEV+
Sbjct:  224 NWAKRMKCNICNTTKPGHNEGGVRGGRGGGYKELDEEELEEVKRRRKEAEEDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVQ 314
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: B8BEA5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30792 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.387e-24
Identity = 56/91 (61.54%), Postives = 61/91 (67.03%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVE 275
            NWAKR+KCNICNT KPGHNE          YK               +AE DDGE+YDEFGNLKKKFRAKTQQ+E A  LPGSGRAGWEV+
Sbjct:  281 NWAKRMKCNICNTTKPGHNEGGVRGGRGGGYKELDEEELEEVKRRRKEAEEDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVQ 371
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Match: B8B591_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25698 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.170e-23
Identity = 55/89 (61.80%), Postives = 59/89 (66.29%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQAE-DDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWE 269
            NWAKR+KCNICNT KPGHNE          YK               +AE DDGE+YDEFGNLKKKFRAKTQQ+E A  LPGSGRAGWE
Sbjct:  229 NWAKRMKCNICNTTKPGHNEGGVRGGRGGGYKELDEEELEEVKRRRKEAEEDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWE 317
[Close]
BLAST of Pisum_sativum_v1_Contig764 vs. TAIR peptide
Match: AT1G50300.1 (| Symbols: TAF15 | TBP-associated factor 15 | chr1:18628818-18631662 REVERSE LENGTH=372)

HSP 1 Score: 110.538 bits (275), Expect = 1.026e-24
Identity = 56/102 (54.90%), Postives = 65/102 (63.73%), Query Frame = 3 
Query:    6 NWAKRLKCNICNTNKPGHNEXXXXXXXXXXYKXXXXXXXXXXXXXXXQA-EDDGELYDEFGNLKKKFRAKTQQSETARVLPGSGRAGWEVEDLGIHRDATEK 308
            NWAKRLKCNICNTNKPG NE          YK               +A EDDGE+YDEFGNLKKK+R KT Q++T R    +GRAGWEVE+LGI +D  E+
Sbjct:  216 NWAKRLKCNICNTNKPGQNEGGVRGGRGGGYKELDEQELEETKRRRREAEEDDGEMYDEFGNLKKKYRVKTNQADT-RPAVAAGRAGWEVEELGIDKDGRER 316
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig764 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TM21_SOYBN1.202e-3067.00Putative uncharacterized protein OS=Glycine max PE... [more]
B9S3N2_RICCO9.522e-2863.11RNA binding protein, putative OS=Ricinus communis ... [more]
B9HI59_POPTR1.244e-2761.70Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TAD5_VITVI8.061e-2761.17Whole genome shotgun sequence of line PN40024, sca... [more]
B9HY23_POPTR6.824e-2663.83Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q6YS82_ORYSJ9.854e-2561.70Os07g0296200 protein OS=Oryza sativa subsp. japoni... [more]
Q69IY8_ORYSJ9.854e-2561.70RRM-containing RNA-binding protein-like OS=Oryza s... [more]
Q69TN3_ORYSJ6.387e-2461.54Putative uncharacterized protein OS=Oryza sativa s... [more]
B8BEA5_ORYSI6.387e-2461.54Putative uncharacterized protein OS=Oryza sativa s... [more]
B8B591_ORYSI3.170e-2361.80Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of Pisum_sativum_v1_Contig764 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G50300.11.026e-2454.90| Symbols: TAF15 | TBP-associated factor 15 | chr1... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..31
score: NAcoord: 36..56
score
NoneNo IPR availablePANTHERPTHR12999FAMILY NOT NAMEDcoord: 2..144
score: 8.1
NoneNo IPR availablePANTHERPTHR12999:SF1gb def: At1g50300/F14I3_23 (TAF15)coord: 2..144
score: 8.1
NoneNo IPR availableSEGsegsegcoord: 22..31
score: NAcoord: 34..48
score: NAcoord: 103..119
score: NAcoord: 125..153
score
NoneNo IPR availableSEGsegsegcoord: 37..45
score: NAcoord: 54..62
score
NoneNo IPR availableSEGsegsegcoord: 14..41
score: NAcoord: 43..56
score
NoneNo IPR availableSEGsegsegcoord: 31..47
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig764 ID=Pisum_sativum_v1_Contig764; Name=Pisum_sativum_v1_Contig764; organism=Pisum sativum; type=contig; length=772bp
ATAGCAATTGGGCAAAGCGGTTAAAATGCAATATTTGCAATACAAATAAG
CCTGGCCACAACGAGGGTGGTGTAAGAGGAGGGCGAGCTGGAGGTTACAA
AGAGCTTGATGAAGAGGAAATTGAAGAAACTAAACGTCGTAGGCGGCAGG
CTGAAGATGATGGTGAGCTGTATGATGAATTTGGAAACCTTAAGAAGAAA
TTCCGTGCCAAAACACAGCAATCTGAAACTGCACGAGTGCTTCCTGGTTC
AGGGCGTGCTGGTTGGGAGGTTGAGGATCTAGGGATTCACAGAGATGCTA
CAGAAAAAAGCAGAGACAGGGGAAGGGATCGTGATGATGGAGAGCAGAGA
AGCAGAGAGCCAATCGAGAAGGAGAGACAAAGCAGTCGGAATAGAGAGAG
GGACAGAGGAAGAGATCGAGACAGGGATTATGGGCGAGATCGGGACCGGA
GTAGACACCGATATTAAAAATAGCAGTAGAAGTGCATCCTGATGTTTTGA
CACTAATTATGTGTTGCCTTTTTGACTAGAAATTTCATTTGCTTTGAATT
AAATCCTTAAATTTGGGGATTGATATCCTGCAATCTGATGAATGCATGGA
CCTAATGTATAACCAAAGATCTTTATGCTGTTAGTATTTCCTTGGACAAA
TTTCTATTTGAGAATATTCACAATAGTTTGAACTATTAGCATCTTGTCTG
CTTCATGTGTGTAATCTTATTACCGCCTATTAATCTGAATTGGATTGTAA
TGGATGAATTAAAATACTTTTT
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