Pisum_sativum_v1_Contig825

Contig Overview
NamePisum_sativum_v1_Contig825
Unique NamePisum_sativum_v1_Contig825
Typecontig
OrganismPisum sativum (pea)
Sequence length777
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG533646ESTFG533646:1..692 +
FG528747ESTFG528747:444..777 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG533646FG533646Pisum sativumEST
FG528747FG528747Pisum sativumEST


Homology
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BLAST of Pisum_sativum_v1_Contig825 vs. TrEMBL
Match: B9RVT3_RICCO (Homeobox protein, putative OS=Ricinus communis GN=RCOM_1172170 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.085e-10
Identity = 67/222 (30.18%), Postives = 94/222 (42.34%), Query Frame = 3 
Query:    3 GSNHSHGQRSQGRVAXXXXXXXXXXXXXXXXXIGKLHGWKG-TPYXXXXXXXXXXXXXXXKPAAKMNVINDERDTTKDIMEKTLI--FVREVINEDETEAN---VLNGSNSERSDYEGGLCRATGDECDYLLDNNNDGYRGGFSGKSENLIEQSHYN-XXXXXXXXXXXXXXXXXXXGQADLNVPDYIIGGDSNAGYSREENAEKTEGPD-GVGSTSFDCSD 644
            G +H+ G  S+ R                    G++  WKG +                 KP  +   +  + +  K+I+ + +     RE  N DET        N S+SERS+Y+    +ATGDE D   D   D Y GGF+GKS++L+E S YN                     Q DL+V  Y I GDSN    R+ + E+   PD G GS+S D SD
Sbjct: 1567 GRSHTSGTNSRSRAGSSRSESGKRSLASNNNRSGQVLSWKGQSRARGGRKRGRRSVRSRQKPVKRAVDVAAQTNVAKEIIYEKVPTKLEREDWNIDETRFQSRIAENLSSSERSEYDDENGQATGDEYD---DLPVDDYTGGFNGKSDDLLEGSDYNMDPNEEEDDEDDDEADLDEDDQGDLDVEGY-INGDSNDDGIRDGDGEQNGDPDEGTGSSSSDFSD 1784
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig825 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B9RVT3_RICCO4.085e-1030.18Homeobox protein, putative OS=Ricinus communis GN=... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..32
score: NAcoord: 45..59
score: NAcoord: 152..170
score
NoneNo IPR availableSEGsegsegcoord: 14..41
score: NAcoord: 52..65
score: NAcoord: 78..97
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig825 ID=Pisum_sativum_v1_Contig825; Name=Pisum_sativum_v1_Contig825; organism=Pisum sativum; type=contig; length=777bp
AAGGCAGCAACCACTCTCATGGTCAAAGATCACAGGGAAGAGTTGCTAGT
TCAAGACCCACTTCCAGAAAGAGAAGCACTACATCCAACAGCAGGAGAAT
AGGAAAATTACATGGATGGAAAGGGACACCGTACAGACAAGGACGCGTTC
GTGGTCGGAGGAGCATTAGAAGCAGGCAGAAACCAGCAGCCAAGATGAAT
GTGATTAATGATGAGAGAGATACCACAAAAGACATCATGGAGAAAACACT
AATCTTTGTCAGAGAGGTAATTAATGAAGACGAAACAGAAGCCAATGTTC
TAAATGGTAGCAATTCGGAAAGATCAGACTATGAAGGTGGTCTTTGTCGA
GCAACAGGAGATGAGTGTGATTATTTGTTAGATAATAACAATGATGGATA
TCGGGGTGGATTTAGTGGGAAATCTGAGAATCTAATTGAACAGAGCCACT
ATAATGTAGATGATGAGGAAGATGTGGATATGGATGATGATGTCGATGAT
GACATCGAAGATGGGCAGGCGGATCTTAACGTTCCAGATTATATAATTGG
CGGGGACTCAAATGCAGGGTACAGTAGAGAAGAAAATGCAGAGAAAACTG
AGGGTCCAGATGGTGTTGGGTCTACATCATTTGATTGCAGTGATTAAATG
TAGCACATAATGTATGTAGCATAAAGTTGTAATTTTATTTAGTAGTTATG
TAGGAATAGGCCAAATATCAGGTGCTTGAATGTGAATGATGCAAAATTAT
GAAAGAAAATTCGTCTCTTATGTTTGT
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