Pisum_sativum_v1_Contig842

Contig Overview


Name	Pisum_sativum_v1_Contig842
Unique Name	Pisum_sativum_v1_Contig842
Type	contig
Organism	Pisum sativum (pea)
Sequence length	734

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CD860744	EST	CD860744:92..485 +
CD858631	EST	CD858631:75..507 -
FG528749	EST	FG528749:1..658 +
FG528757	EST	FG528757:96..734 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
CD860744	CD860744	Pisum sativum	EST
CD858631	CD858631	Pisum sativum	EST
FG528749	FG528749	Pisum sativum	EST
FG528757	FG528757	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. SwissProt
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.569e-33
Identity = 71/91 (78.02%), Postives = 75/91 (82.42%), Query Frame = 3

Query:  315 NELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            NEL TDLKEKWDGLENKST              SSI+VGAINSVPLLPK+MELVGLGYTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:   74 NELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. SwissProt
Match: TMP14_ARATH (Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 1.021e-9
Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 3

Query:  318 ELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGT 584
            E+    +E W+ +++K                S+ ++ AI+ +PL+P ++ELVG+GYTGWF Y+ L+FK  R+ L   +++  K I G+
Sbjct:   85 EIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. SwissProt
Match: SYE_TRIEI (Glutamyl-tRNA synthetase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.248e-7
Identity = 25/55 (45.45%), Postives = 41/55 (74.55%), Query Frame = 3

Query:  417 SILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAG 581
            ++++ A++ +P+L  I EL+G+ Y  WFVYRYLL +S+R+EL   IE +K++I G
Sbjct:  824 AVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDKIENIKREIFG 878

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: B7FGQ4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 7.109e-38
Identity = 86/119 (72.27%), Postives = 89/119 (74.79%), Query Frame = 3

Query:  231 KHFSESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            +  SESRKFSLH+TRA            NELFTDLKEKWD LENKST              SSILVGAINSV LLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDI+ALKKKIAGTE
Sbjct:   43 QQLSESRKFSLHQTRASSSEETSTSLDTNELFTDLKEKWDALENKSTVLLYGGGGLVAVWLSSILVGAINSVLLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIDALKKKIAGTE 161

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: C6SVQ2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.227e-34
Identity = 82/118 (69.49%), Postives = 86/118 (72.88%), Query Frame = 3

Query:  234 HFSESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            +FS SRK SL +TRA            NE+FTDLKEKWD LENKST              SSILV AINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIE+LKKKI GTE
Sbjct:   48 NFSVSRKSSLLQTRASSEESSSVDA--NEVFTDLKEKWDALENKSTVLLYGGGAIVAIWLSSILVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKITGTE 163

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: B9I8T5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_731248 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.227e-34
Identity = 78/116 (67.24%), Postives = 87/116 (75.00%), Query Frame = 3

Query:  240 SESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            SESR+F+  +TRA            NE+FTDLKEKWD +ENKST              SSIL+GA+NSVPLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELATDIE+LKKKIAGTE
Sbjct:   38 SESRRFAPFQTRASSSEESPVDA--NEIFTDLKEKWDAVENKSTVIIYGGGAVVAVWLSSILIGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 151

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: A9PH76_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.227e-34
Identity = 78/116 (67.24%), Postives = 87/116 (75.00%), Query Frame = 3

Query:  240 SESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            SESR+F+  +TRA            NE+FTDLKEKWD +ENKST              SSIL+GA+NSVPLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELATDIE+LKKKIAGTE
Sbjct:   51 SESRRFAPFQTRASSSEESPVDA--NEIFTDLKEKWDAVENKSTVIIYGGGAVVAVWLSSILIGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 164

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: B4YYA4_THEHA (ST6-40 OS=Thellungiella halophila PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 4.037e-33
Identity = 76/114 (66.67%), Postives = 83/114 (72.81%), Query Frame = 3

Query:  246 SRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            S+K  L +TRA            NEL TDLKEKWDGLENKST              SSI+VGAINSVPLLPK+MELVGLGYTGWFVYRYLLFKSSRKELA DI++L+KKIAGTE
Sbjct:   56 SQKVELMKTRASSSEETSTSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIDSLEKKIAGTE 169

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: B9GQF8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_409886 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.616e-32
Identity = 77/116 (66.38%), Postives = 84/116 (72.41%), Query Frame = 3

Query:  240 SESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            SES +F+  + RA            NE+FTDLKEKWD +ENKST              SSI++GAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIE LKKKIAGTE
Sbjct:   42 SESHRFAPLQIRASSSEESSVDA--NEVFTDLKEKWDAVENKSTVILYGGGAIVFVWLSSIVIGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEVLKKKIAGTE 155

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: B9RE13_RICCO (Thylakoid membrane phosphoprotein 14 kDa, chloroplast, putative OS=Ricinus communis GN=RCOM_1617300 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.463e-32
Identity = 79/119 (66.39%), Postives = 84/119 (70.59%), Query Frame = 3

Query:  231 KHFSESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            K  S SR+ SL + RA             ELFTDLK +WD LENKST              SSI+VGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAG+E
Sbjct:   51 KQVSASRRVSLLQIRASSEESAPVDA--GELFTDLKARWDALENKSTVVLYGGGAIVAVWLSSIVVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGSE 167

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: D7M4Y4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_912116 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.942e-32
Identity = 71/91 (78.02%), Postives = 75/91 (82.42%), Query Frame = 3

Query:  315 NELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            NEL TDLKEKWDGLENKST              SSI+VGAINSVPLLPK+MELVGLGYTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:   77 NELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 167

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: D7UCK1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027036001 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.696e-31
Identity = 74/118 (62.71%), Postives = 82/118 (69.49%), Query Frame = 3

Query:  234 HFSESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            HFS SR+FS  + RA             ELFTDLK KWD LENKST              SS++VGA+NSVPLLPKIMELVGLGYT WFVYRY+LFKS+RKELATDIEALKKK+ G E
Sbjct:   32 HFSGSRRFSSLQVRASSSEETSLNT--EELFTDLKAKWDALENKSTVFLYGGGAIVAVWLSSVVVGAVNSVPLLPKIMELVGLGYTAWFVYRYILFKSNRKELATDIEALKKKVTGAE 147

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Match: A5AEL3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035039 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.099e-30
Identity = 75/119 (63.03%), Postives = 84/119 (70.59%), Query Frame = 3

Query:  231 KHFSESRKFSLHRTRAXXXXXXXXXXXXNELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            K FS+S +FS  + +A             ELF+DL E+WD LENKST              SSI+V AINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKI+G+E
Sbjct:   45 KLFSDSNRFSSLQIKASSDESGPVDA--GELFSDLMERWDALENKSTVFIYGGGAIVAVWLSSIIVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGSE 161

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TAIR peptide
Match: AT4G01150.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr4:493692-494668 FORWARD LENGTH=164)

HSP 1 Score: 140.969 bits (354), Expect = 6.550e-34
Identity = 71/91 (78.02%), Postives = 75/91 (82.42%), Query Frame = 3

Query:  315 NELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            NEL TDLKEKWDGLENKST              SSI+VGAINSVPLLPK+MELVGLGYTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:   74 NELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TAIR peptide
Match: AT4G38100.1 (| Symbols: | unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:17887033-17888177 REVERSE LENGTH=193)

HSP 1 Score: 70.4774 bits (171), Expect = 1.087e-12
Identity = 29/58 (50.00%), Postives = 45/58 (77.59%), Query Frame = 3

Query:  414 SSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 587
            +S +V ++ ++PL PK+ME+VGLGYT WF  RYLLFK +R+EL T +  +KK++ G++
Sbjct:  134 TSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TAIR peptide
Match: AT2G46820.2 (| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174)

HSP 1 Score: 63.929 bits (154), Expect = 1.018e-10
Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 3

Query:  318 ELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGT 584
            E+    +E W+ +++K                S+ ++ AI+ +PL+P ++ELVG+GYTGWF Y+ L+FK  R+ L   +++  K I G+
Sbjct:   85 EIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TAIR peptide
Match: AT2G46820.1 (| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174)

HSP 1 Score: 63.929 bits (154), Expect = 1.018e-10
Identity = 29/89 (32.58%), Postives = 51/89 (57.30%), Query Frame = 3

Query:  318 ELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGT 584
            E+    +E W+ +++K                S+ ++ AI+ +PL+P ++ELVG+GYTGWF Y+ L+FK  R+ L   +++  K I G+
Sbjct:   85 EIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Pisum_sativum_v1_Contig842 vs. TAIR peptide
Match: AT4G01150.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:493692-494379 FORWARD LENGTH=125)

HSP 1 Score: 58.5362 bits (140), Expect = 4.275e-9
Identity = 30/47 (63.83%), Postives = 32/47 (68.09%), Query Frame = 3

Query:  315 NELFTDLKEKWDGLENKSTXXXXXXXXXXXXXXSSILVGAINSVPLL 455
            NEL TDLKEKWDGLENKST              SSI+VGAINSVPL+
Sbjct:   74 NELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLV 120

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig842 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig842 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig842 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
Y4115_ARATH	6.569e-33	78.02	Uncharacterized protein At4g01150, chloroplastic O...	[more]
TMP14_ARATH	1.021e-9	32.58	Thylakoid membrane phosphoprotein 14 kDa, chloropl...	[more]
SYE_TRIEI	1.248e-7	45.45	Glutamyl-tRNA synthetase OS=Trichodesmium erythrae...	[more]

BLAST of Pisum_sativum_v1_Contig842 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGQ4_MEDTR	7.109e-38	72.27	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SVQ2_SOYBN	6.227e-34	69.49	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9I8T5_POPTR	6.227e-34	67.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PH76_POPTR	6.227e-34	67.24	Putative uncharacterized protein OS=Populus tricho...	[more]
B4YYA4_THEHA	4.037e-33	66.67	ST6-40 OS=Thellungiella halophila PE=2 SV=1	[more]
B9GQF8_POPTR	2.616e-32	66.38	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9RE13_RICCO	4.463e-32	66.39	Thylakoid membrane phosphoprotein 14 kDa, chloropl...	[more]
D7M4Y4_ARALY	9.942e-32	78.02	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7UCK1_VITVI	1.696e-31	62.71	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AEL3_VITVI	1.099e-30	63.03	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of Pisum_sativum_v1_Contig842 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G01150.1	6.550e-34	78.02	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]
AT4G38100.1	1.087e-12	50.00	\| Symbols: \| unknown protein; LOCATED IN: chlorop...	[more]
AT2G46820.2	1.018e-10	32.58	\| Symbols: PTAC8, TMP14, PSAP, PSI-P \| photosystem...	[more]
AT2G46820.1	1.018e-10	32.58	\| Symbols: PTAC8, TMP14, PSAP, PSI-P \| photosystem...	[more]
AT4G01150.2	4.275e-9	63.83	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 1..28 score: NAcoord: 38..55 score
None	No IPR available	SEG	seg	seg	coord: 18..37 score: NAcoord: 43..60 score
None	No IPR available	SEG	seg	seg	coord: 32..47 score: NAcoord: 51..70 score: NAcoord: 87..98 score: NAcoord: 118..131 score
None	No IPR available	SEG	seg	seg	coord: 1..16 score: NAcoord: 22..34 score: NAcoord: 36..70 score
None	No IPR available	SEG	seg	seg	coord: 25..42 score
None	No IPR available	SEG	seg	seg	coord: 62..75 score
None	No IPR available	SEG	seg	seg	coord: 6..17 score: NAcoord: 31..57 score
None	No IPR available	SEG	seg	seg	coord: 21..47 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig842 ID=Pisum_sativum_v1_Contig842; Name=Pisum_sativum_v1_Contig842; organism=Pisum sativum; type=contig; length=734bp
AAACAGAAAAAAAGGTGTGAGAGAGAGAGAGAAACAAGAAAGCAGATAAC
AGAAAAAAAGGTGTGAGAGAGAGAGAGAAACAAGAGTTAATGGCAATGGC
AGCAAGCACAAGCACAGTGTTAGTCCCTCCTCTTCCTCGGCTACTGACCA
CCACCACTCGCTGCTCTGCTTTGCCTTATCTCCCTCCTCCTCGCCTCTCC
ACCACCACTCCTTCTTCTTCCCCTTTCCCTAAACATTTTTCAGAGTCGCG
GAAGTTTTCTCTTCATCGGACTAGAGCTTCTTCTTCTGATGATACATCTA
CTTCTCTCGATACCAATGAGTTGTTTACCGATTTGAAGGAGAAGTGGGAT
GGTCTTGAAAACAAGTCCACAGTGCTTCTGTATGGTGGTGGTGGTTTGGT
TGCTGTTTGGTTATCTTCAATTCTTGTAGGTGCCATCAACTCAGTCCCCT
TGCTTCCAAAGATTATGGAGTTGGTAGGACTAGGGTACACTGGATGGTTT
GTCTACCGGTACCTTCTGTTTAAGTCTAGTAGAAAGGAACTAGCTACGGA
TATTGAGGCACTGAAAAAGAAAATTGCCGGAACCGAATAGAGCTGTATTA
GTAGCAAGCCATGTTGATCTTCCTTGCTCATCATTTGGTTGTTTTGCTGT
ATGTCTTGTTATTTGAGAGGCATTTGTATCTCTTGATATAGAATAGAATT
GCTCAATCTCTATCAGTATCAACCTTGTATTAAT

Search form

Pisum_sativum_v1_Contig842