Pisum_sativum_v1_Contig861

Contig Overview
NamePisum_sativum_v1_Contig861
Unique NamePisum_sativum_v1_Contig861
Typecontig
OrganismPisum sativum (pea)
Sequence length653
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FG538946ESTFG538946:1..526 +Pisum sativum unigene v1n/a
FG535795ESTFG535795:42..546 +Pisum sativum unigene v1n/a
FG538352ESTFG538352:146..653 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG538946FG538946Pisum sativumEST
FG535795FG535795Pisum sativumEST
FG538352FG538352Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig861 vs. TrEMBL
Match: C6T987_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.910e-10
Identity = 31/34 (91.18%), Postives = 34/34 (100.00%), Query Frame = 2
Query:    2 KQRSKDAFINMAAGANEEATHRVGHDERQPLLPT 103
            KQRSK++FINMAAGANEEATHRVGHDERQPLLP+
Sbjct:  370 KQRSKESFINMAAGANEEATHRVGHDERQPLLPS 403          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig861 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C6T987_SOYBN4.910e-1091.18Putative uncharacterized protein OS=Glycine max PE... [more]
back to top
Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig861 ID=Pisum_sativum_v1_Contig861; Name=Pisum_sativum_v1_Contig861; organism=Pisum sativum; type=contig; length=653bp
TAAACAAAGGTCAAAGGACGCATTTATAAATATGGCAGCTGGAGCAAATG
AAGAGGCCACTCATCGAGTGGGACATGATGAGAGACAGCCACTTCTCCCC
ACCTAGATTAACCTATTGAATTTTGAAAGAATGTTTTTTTTGGTGATATC
TGATAGCTATGGTCCCACACAGTTTAAAGTCATAATAAACTAAAAAAGAT
TTTGCTGCCTTTCTTGCTTAGCTTTCCGCAGAAAGTATTTGTCTAGTGGT
TCCATAAATTCAGACATGAATTATCGGCTTCTGAGAGGTGGTGAACAAGC
CAATGCTTTCCGTTGCTGAAGATTTTGATAGAGCATAGCAAATGGATTCG
TAAGAGCTTTTGGCATATCAATGTGGATTTACCTGTACTTCATTTATTCT
TTATAGCGTGGACATTCAATTCCTCTTTATATTTGTTTTCCTGATATATT
TACTTCAACCCATTCTATCTATAGTGTTATTCTTTACATTTATTACCTAG
TGTGGACTTTTTACGCCGTTCTTTCTATATTGTGATATTTAAGGGTTGAT
AGAGAACATGAGGATTCCGCTCTTTCTTGTAGAAATTTATATTTGCGTGC
TTACAAAGCATTGGAAGACGATATTTGTATATGTTTCTATACTGGTGACT
GAT
back to top