Pisum_sativum_v1_Contig933

Contig Overview
NamePisum_sativum_v1_Contig933
Unique NamePisum_sativum_v1_Contig933
Typecontig
OrganismPisum sativum (pea)
Sequence length625
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
EX569345ESTEX569345:160..420 +Pisum sativum unigene v1n/a
FG538817ESTFG538817:1..625 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
EX569345EX569345Pisum sativumEST
FG538817FG538817Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: B7FKU1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.662e-43
Identity = 92/125 (73.60%), Postives = 99/125 (79.20%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVNSTVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVVFCN   +ASKNVD T+SEGEVLSELISSVE+SGAKYAVLYVSD+S+SIQYPSYR+LQRFLAEST GNGS NST CDGVCQLKSS                   CCMMGIDSPTRFEAPQ+
Sbjct:  195 TDLVVFCNGP-QASKNVDSTKSEGEVLSELISSVEESGAKYAVLYVSDISRSIQYPSYRDLQRFLAESTTGNGSTNSTACDGVCQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEAPQE 318
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: C6TIE1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.639e-41
Identity = 86/125 (68.80%), Postives = 97/125 (77.60%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVNSTVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVVFCNE S+A +NVDRTQSEGEVLS LI+SVE+SGAKYA+LYVSD S+SIQYPSYR+LQRFLAEST GN S NST+CD VCQ+KSS                   CCMMGID+PTRFE PQ+
Sbjct:  193 TDLVVFCNEGSQALENVDRTQSEGEVLSNLINSVEESGAKYAILYVSDPSRSIQYPSYRDLQRFLAESTAGNESTNSTICDEVCQIKSSLLEGILVGIVLLIILISGLCCMMGIDTPTRFETPQE 317
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: D7SLP5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025511001 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.879e-32
Identity = 74/125 (59.20%), Postives = 85/125 (68.00%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVNSTVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLV+FC+  S   +   R +SE  V SELISS+E+SG KY VLYVSD  +SIQYPSYR+L+RFLAE T GNGS NST CD VCQ+KSS                   CCMMGID+PTRFEAPQD
Sbjct:  225 TDLVMFCHGGSHLEELDQRLESE--VFSELISSLEQSGTKYTVLYVSDPFRSIQYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIILISGLCCMMGIDTPTRFEAPQD 347
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: B9GLA8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_750407 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.879e-32
Identity = 73/125 (58.40%), Postives = 84/125 (67.20%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVNSTVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVVFC   S + K +D+ QSE E+ SELISSVE  G KY+VLYVSD  +SI  P +REL+RFLAES  GN S+NST CD VCQ+KSS                   CCMMGID+PTRFEAPQD
Sbjct:  191 TDLVVFCYGGSNSMKGLDQPQSESEIFSELISSVEMLGGKYSVLYVSDPFRSIHLPYHRELERFLAESAAGNASLNSTHCDEVCQIKSSLLEGVLVGIVLLIILISGLCCMMGIDTPTRFEAPQD 315
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: A5BJ31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041203 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.879e-32
Identity = 74/125 (59.20%), Postives = 85/125 (68.00%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVNSTVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLV+FC+  S   +   R +SE  V SELISS+E+SG KY VLYVSD  +SIQYPSYR+L+RFLAE T GNGS NST CD VCQ+KSS                   CCMMGID+PTRFEAPQD
Sbjct:  192 TDLVMFCHGGSHLEELDQRLESE--VFSELISSLEQSGTKYTVLYVSDPFRSIQYPSYRDLERFLAEGTYGNGSANSTTCDEVCQIKSSLLEGLLVGIVLLIILISGLCCMMGIDTPTRFEAPQD 314
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: B9SBL7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0341930 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.213e-30
Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 3 
Query:    6 DLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVNSTVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            DLVVFC+  + ++K +++ +SE E+LSELISSVE  G KY VLYVSD  +SIQYPS+R+L+RFLAE +IGNGS+NST CD VC++KSS                   CCMMGID+PTRFEAPQ+
Sbjct:  196 DLVVFCHG-AHSAKGLEQPKSESEILSELISSVETLGVKYEVLYVSDPFRSIQYPSHRDLRRFLAEGSIGNGSLNST-CDEVCKIKSSLLEGVLVGIVLLIILISGLCCMMGIDTPTRFEAPQE 317
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: D7KMA7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_314773 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.897e-22
Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVN-STVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVV C+  S +S   D++ S+ E++SEL+SSVE+S  KY  LYVSD      Y SY+ LQRFLAE+  GN +   +T CD +C+ KSS                   CCM GID+PTRFE PQD
Sbjct:  190 TDLVVLCSGGSESSSQSDQSHSDREIISELVSSVEQSETKYTALYVSD---PYWYTSYQTLQRFLAEAATGNTTAEATTTCDELCKFKSSLLEGILVGIVFLLILISGLCCMAGIDTPTRFETPQD 312
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: D7L1D9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478722 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.454e-22
Identity = 59/126 (46.83%), Postives = 74/126 (58.73%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVN-STVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVV C+E S +     ++ SE E + EL+SSVE+SG+KY  LYVSD      Y SY+ LQRFLAE+  GN +   +T CD +C+ KSS                   CCM GID+PTRFE PQD
Sbjct:  198 TDLVVLCSEGSESKSQAAQSHSERESILELVSSVEQSGSKYTALYVSD---PYWYTSYKTLQRFLAETAKGNSTPEVATACDELCKFKSSLLEGILVGIVFLLILISGLCCMAGIDTPTRFETPQD 320
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: Q8H7I0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.429e-22
Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVN-STVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVV C+E S ++    ++ SE E + EL+SSVE+SG+KY  LYVSD      Y SY+ LQRFLAE+  GN +   +T CD +C+ KSS                   CCM GID+PTRFE PQD
Sbjct:  198 TDLVVLCSEGSESNSQAGQSHSERESILELVSSVEQSGSKYTALYVSD---PYWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLLEGILVGIVFLLILISGLCCMAGIDTPTRFETPQD 320
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Match: Q8LFS9_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.101e-21
Identity = 59/126 (46.83%), Postives = 76/126 (60.32%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVN-STVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVV C+E S ++    +++SE E + EL+SSVE+SG+KY  LYVSD      Y SY+ LQRFLAE+  GN +   +T CD +C+ KSS                   CCM GID+PTRFE PQD
Sbjct:   80 TDLVVLCSEGSESNSQSGQSRSERESILELVSSVEQSGSKYTALYVSD---PYWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLLEGILVGIVFLLILISGLCCMAGIDTPTRFETPQD 202
[Close]
BLAST of Pisum_sativum_v1_Contig933 vs. TAIR peptide
Match: AT3G13410.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:4362149-4364032 REVERSE LENGTH=321)

HSP 1 Score: 106.686 bits (265), Expect = 1.047e-23
Identity = 59/126 (46.83%), Postives = 74/126 (58.73%), Query Frame = 3 
Query:    3 TDLVVFCNEQSRASKNVDRTQSEGEVLSELISSVEKSGAKYAVLYVSDLSKSIQYPSYRELQRFLAESTIGNGSVN-STVCDGVCQLKSSXXXXXXXXXXXXXXXXXXXCCMMGIDSPTRFEAPQD 377
            TDLVV C+E S ++    ++ SE E   EL+SSVE+SG+KY  LYVSD      Y SY+ LQRFLAE+  GN +   +T CD +C+ KSS                   CCM GID+PTRFE PQD
Sbjct:  198 TDLVVLCSEGSESNSQAGQSHSERESFLELVSSVEQSGSKYTALYVSD---PYWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLLEGILVGIVFLLILISGLCCMAGIDTPTRFETPQD 320
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig933 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FKU1_MEDTR8.662e-4373.60Putative uncharacterized protein OS=Medicago trunc... [more]
C6TIE1_SOYBN3.639e-4168.80Putative uncharacterized protein OS=Glycine max PE... [more]
D7SLP5_VITVI6.879e-3259.20Whole genome shotgun sequence of line PN40024, sca... [more]
B9GLA8_POPTR6.879e-3258.40Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BJ31_VITVI6.879e-3259.20Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SBL7_RICCO2.213e-3057.26Putative uncharacterized protein OS=Ricinus commun... [more]
D7KMA7_ARALY2.897e-2246.83Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7L1D9_ARALY6.454e-2246.83Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8H7I0_ARATH8.429e-2246.83Putative uncharacterized protein OS=Arabidopsis th... [more]
Q8LFS9_ARATH1.101e-2146.83Putative uncharacterized protein (Fragment) OS=Ara... [more]
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BLAST of Pisum_sativum_v1_Contig933 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G13410.11.047e-2346.83| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 90..108
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig933 ID=Pisum_sativum_v1_Contig933; Name=Pisum_sativum_v1_Contig933; organism=Pisum sativum; type=contig; length=625bp
AAACAGATTTGGTTGTGTTCTGCAATGAACAGTCTCGAGCTTCGAAAAAT
GTTGACAGAACACAATCTGAAGGTGAAGTTTTATCTGAGCTTATCAGCTC
TGTAGAGAAGTCTGGGGCAAAGTATGCAGTTCTTTACGTGTCAGATCTCT
CAAAGTCAATCCAGTATCCTTCTTACAGGGAACTGCAAAGGTTTCTAGCA
GAAAGTACAATAGGGAATGGATCAGTCAATTCTACAGTCTGTGACGGTGT
TTGCCAGCTTAAATCATCGCTTCTGGAGGGGCTTTTTGTGGGAATAGTTT
TGTTAATAATTTTGATATCGGGACTTTGCTGTATGATGGGAATTGACTCC
CCAACAAGATTTGAGGCGCCACAAGACTGATGATCCATTTGTTAAAGCTA
ATAATTGTTCTGGTGCTGGGTCCTACTTCATTAAAATATTACTGCTACAT
TATTTGTGGTTTTTATGGAGGCTCGGTTGAATTCCTGTAATTTTCTACTT
ATTTAAGGGACTTTTCATGTTACCAGTATATAAAAGTAAAACATCTTTGT
AGGTTTTAATTTTGATCCTGTTGNTGTTGTAAACTTTTAAGTAAGAAGCA
ATTTCAGAATATGTTGAGTGTTCTG
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