Pisum_sativum_v1_Contig934

Contig Overview
NamePisum_sativum_v1_Contig934
Unique NamePisum_sativum_v1_Contig934
Typecontig
OrganismPisum sativum (pea)
Sequence length461
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FG538804ESTFG538804:1..462 +Pisum sativum unigene v1n/a
FG538803ESTFG538803:1..460 +Pisum sativum unigene v1n/a
FG534096ESTFG534096:19..447 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG538804FG538804Pisum sativumEST
FG538803FG538803Pisum sativumEST
FG534096FG534096Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig934 vs. TrEMBL
Match: B9RYS1_RICCO (Kinase, putative OS=Ricinus communis GN=RCOM_1312940 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.363e-8
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:    7 ELEAIETQYRQCFRELVKMREEAIENAKKRWISKKNTTVI 126
            EL+AI+ QY QCFREL  MREEAIENAKK+WI++K    I
Sbjct:  546 ELDAIDMQYNQCFRELSMMREEAIENAKKKWITRKKVPAI 585
[Close]
BLAST of Pisum_sativum_v1_Contig934 vs. TrEMBL
Match: B9GK92_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1066545 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.246e-7
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 1 
Query:    7 ELEAIETQYRQCFRELVKMREEAIENAKKRWISK 108
            EL++I++ Y QCF+EL+K REEAIENAK+RWISK
Sbjct:  534 ELDSIDSHYNQCFQELMKTREEAIENAKRRWISK 567
[Close]
BLAST of Pisum_sativum_v1_Contig934 vs. TAIR peptide
Match: AT5G41990.1 (| Symbols: WNK8, ATWNK8 | with no lysine (K) kinase 8 | chr5:16795085-16797562 REVERSE LENGTH=563)

HSP 1 Score: 51.9878 bits (123), Expect = 1.704e-7
Identity = 21/41 (51.22%), Postives = 34/41 (82.93%), Query Frame = 1 
Query:    1 QSELEAIETQYRQCFRELVKMREEAIENAKKRWISKKNTTV 123
            ++EL  IE+Q+ Q F++L+K++E+AIENAK++WI+KK   V
Sbjct:  520 KTELNLIESQFNQSFQDLLKLKEDAIENAKRKWITKKQKAV 560
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig934 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9RYS1_RICCO8.363e-867.50Kinase, putative OS=Ricinus communis GN=RCOM_13129... [more]
B9GK92_POPTR9.246e-770.59Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of Pisum_sativum_v1_Contig934 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G41990.11.704e-751.22| Symbols: WNK8, ATWNK8 | with no lysine (K) kinas... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..15
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig934 ID=Pisum_sativum_v1_Contig934; Name=Pisum_sativum_v1_Contig934; organism=Pisum sativum; type=contig; length=461bp
CAGTCGGAGCTTGAAGCAATAGAAACCCAGTATCGGCAATGTTTTCGTGA
ACTTGTGAAGATGAGGGAGGAAGCCATAGAAAATGCCAAAAAGAGATGGA
TTTCAAAGAAGAATACAACAGTTATATGATGCAGTAGGGTGATTTTCTGA
TATTCTAGGATGATTTTATTTTTTGTTTTTTTTGTTGATATTTTTTTAAT
TTCTCAATCCGTCCGCCTATATTTTCAAATCTGTCAAAAATGCATTACCG
GAAACTTCCGGAAAACTTAGGGGGGCGGATTGAGCAATTATCTGGTATTT
TTATTATTGATTTACATTAATTGATTTCTGGCTGCTTTTTATCAACTGCT
TTGAAATTCTCTTGATGGATTTGTTTTTGGTTGCAACTGGCCCTGTGGTT
TTGACATTACTTTGTATGAATGATGATGATGAATCTATATTTTGCCATAT
TTAGGTGTGAA
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