Pisum_sativum_v1_Contig975

Contig Overview
NamePisum_sativum_v1_Contig975
Unique NamePisum_sativum_v1_Contig975
Typecontig
OrganismPisum sativum (pea)
Sequence length526
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD860509ESTCD860509:139..455 +Pisum sativum unigene v1n/a
FG538656ESTFG538656:1..526 -Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860509CD860509Pisum sativumEST
FG538656FG538656Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: C6TNU5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.946e-26
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = -1
Query:  392 PDQSGGFFLIPSSSSGRNYQEENHLPSRFHAWERDHLPSLSLN 520
            PDQS GF  IPS SSGRN+QEE HLPSRFH WER+HLPSL+LN
Sbjct:  141 PDQSAGFVYIPSGSSGRNFQEETHLPSRFHTWEREHLPSLALN 183          

HSP 2 Score: 62.3882 bits (150), Expect = 6.946e-26
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = -2
Query:  268 RDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 381
            R+SSWR YHQ A+ SDPS R SSFRLRH SDR PSQNR
Sbjct:  187 RESSWRAYHQTASVSDPSIRSSSFRLRHESDRMPSQNR 224          
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: A5B3S4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040485 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.734e-19
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = -1
Query:  389 TSPDQSGGFFLIPSSSSGRNYQE-ENHLPSRFHAWERDHLPSLSLNQ 526
            +S DQS GF+  PS +SGRN+QE EN LP+RFH WER+HLPS  L Q
Sbjct:  352 SSSDQSSGFYFFPSGTSGRNFQEAENPLPTRFHGWEREHLPSFPLTQ 398          

HSP 2 Score: 52.7582 bits (125), Expect = 1.734e-19
Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = -2
Query:  268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390
            +++RDS W  +HQ  + SD   R SSFR RHGSDRT SQNR
Sbjct:  398 QVERDSGWGAFHQAGSGSDSGIRPSSFRQRHGSDRTSSQNR 438          
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: B9RFB9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1433520 PE=4 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 8.188e-15
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = -1
Query:  389 TSPDQSGGFFLIPSSSSGRNYQE-ENHLPSRFHAWERDHLPSLSLNQ 526
            +S DQ+G F+ +P  +SGRN+QE +N  P RF AWERDHL   SL+Q
Sbjct:  345 SSSDQTG-FYFVPPGTSGRNFQEADNSPPIRFRAWERDHLQPFSLSQ 390          

HSP 2 Score: 50.8322 bits (120), Expect = 8.188e-15
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = -2
Query:  268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390
            ++DR+SSW  +HQ A+ SDP  R SSFR RHG++R  SQNR
Sbjct:  390 QVDRESSWL-FHQTASGSDPGLRSSSFRQRHGTERMSSQNR 429          
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: B9I7H8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_240561 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.066e-14
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = -1
Query:  389 TSPDQSGGFFLIPSSSSGRNYQEENHLP--SRFHAWERDHLPSLSLNQ 526
            +S DQ+G F+ IPS +SGRN+QE  + P  +RF +WERDHLPS SLNQ
Sbjct:  320 SSSDQTG-FYFIPSGASGRNFQEAENPPPPTRFRSWERDHLPSFSLNQ 366          

HSP 2 Score: 44.2838 bits (103), Expect = 1.066e-14
Identity = 21/41 (51.22%), Postives = 25/41 (60.98%), Query Frame = -2
Query:  268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390
            ++DRDS W  +HQ     DP  R   FR RHGS+R  SQNR
Sbjct:  366 QVDRDSGWSTFHQAGGGPDPGIR---FRQRHGSERMSSQNR 403          
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: B9N4J3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837174 PE=4 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 5.685e-12
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = -2
Query:  268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390
            ++DRDS    +HQ    SDPS R  SFR RHGS+R  SQNR
Sbjct:  391 QVDRDSGRSTFHQAGGGSDPSIRSGSFRQRHGSERMSSQNR 431          

HSP 2 Score: 45.8246 bits (107), Expect = 5.685e-12
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = -1
Query:  389 SPDQSGGFFLIPSSSSGRNYQE-ENHLPSRFHAWERDHLPSLSLNQ 523
            S     GF+ IPS +S RN+QE EN  P+RF +WE  HLP  S++Q
Sbjct:  347 STSDQTGFYFIPSGASSRNFQEAENPPPTRFRSWE-SHLPPFSVSQ 391          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
C6TNU5_SOYBN6.946e-2679.07Putative uncharacterized protein OS=Glycine max PE... [more]
A5B3S4_VITVI1.734e-1963.83Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RFB9_RICCO8.188e-1555.32DNA binding protein, putative OS=Ricinus communis ... [more]
B9I7H8_POPTR1.066e-1460.42Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9N4J3_POPTR5.685e-1256.10Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig975 ID=Pisum_sativum_v1_Contig975; Name=Pisum_sativum_v1_Contig975; organism=Pisum sativum; type=contig; length=526bp
CCAAAAAAAAACTGATTTTACCATCTTATTTTATGCCCTCGGAGGCACAT
AAAATAGTCGAAGCAAATGTCCATCACACAGCAGATGGCTGCCGGAAAAA
TCAGTCCCAAGGCCAGCCAGATTATATAATGTATGTACCTTAACATAACA
GACCCAAAAGGCCAAAGTGACAAAGCAATATGTAACGTTTTTACAAAGCA
TACATAAGTTCTGATTTTCCACACTAGTGCGAGCTTGCTTCGCAGTGCAT
AGGACATAAGTGTATTACCGATTTTGTGAAGGCGTTCTATCTGATCCATG
CCTTAAACGAAAGCTGCTTAATCTCGTACTTGGGTCTGACCGGTTTGCAT
TTTGGTGGTACGGTCTCCAGCTCGAATCTCTATCTAGCTTGATTCAACGA
CAATGAAGGCAAGTGGTCTCTTTCCCAAGCGTGGAAGCGACTCGGTAGAT
GGTTTTCTTCTTGGTAATTTCGTCCTGATGAACTTGACGGGATAAGGAAG
AAACCGCCACTTTGGTCTGGTGATGT
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