Pisum_sativum_v1_Contig975
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: C6TNU5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 6.946e-26 Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = -1 Query: 392 PDQSGGFFLIPSSSSGRNYQEENHLPSRFHAWERDHLPSLSLN 520 PDQS GF IPS SSGRN+QEE HLPSRFH WER+HLPSL+LN Sbjct: 141 PDQSAGFVYIPSGSSGRNFQEETHLPSRFHTWEREHLPSLALN 183 HSP 2 Score: 62.3882 bits (150), Expect = 6.946e-26 Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = -2 Query: 268 RDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 381 R+SSWR YHQ A+ SDPS R SSFRLRH SDR PSQNR Sbjct: 187 RESSWRAYHQTASVSDPSIRSSSFRLRHESDRMPSQNR 224
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: A5B3S4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040485 PE=4 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.734e-19 Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = -1 Query: 389 TSPDQSGGFFLIPSSSSGRNYQE-ENHLPSRFHAWERDHLPSLSLNQ 526 +S DQS GF+ PS +SGRN+QE EN LP+RFH WER+HLPS L Q Sbjct: 352 SSSDQSSGFYFFPSGTSGRNFQEAENPLPTRFHGWEREHLPSFPLTQ 398 HSP 2 Score: 52.7582 bits (125), Expect = 1.734e-19 Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = -2 Query: 268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390 +++RDS W +HQ + SD R SSFR RHGSDRT SQNR Sbjct: 398 QVERDSGWGAFHQAGSGSDSGIRPSSFRQRHGSDRTSSQNR 438
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: B9RFB9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1433520 PE=4 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 8.188e-15 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = -1 Query: 389 TSPDQSGGFFLIPSSSSGRNYQE-ENHLPSRFHAWERDHLPSLSLNQ 526 +S DQ+G F+ +P +SGRN+QE +N P RF AWERDHL SL+Q Sbjct: 345 SSSDQTG-FYFVPPGTSGRNFQEADNSPPIRFRAWERDHLQPFSLSQ 390 HSP 2 Score: 50.8322 bits (120), Expect = 8.188e-15 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = -2 Query: 268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390 ++DR+SSW +HQ A+ SDP R SSFR RHG++R SQNR Sbjct: 390 QVDRESSWL-FHQTASGSDPGLRSSSFRQRHGTERMSSQNR 429
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: B9I7H8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_240561 PE=4 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.066e-14 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = -1 Query: 389 TSPDQSGGFFLIPSSSSGRNYQEENHLP--SRFHAWERDHLPSLSLNQ 526 +S DQ+G F+ IPS +SGRN+QE + P +RF +WERDHLPS SLNQ Sbjct: 320 SSSDQTG-FYFIPSGASGRNFQEAENPPPPTRFRSWERDHLPSFSLNQ 366 HSP 2 Score: 44.2838 bits (103), Expect = 1.066e-14 Identity = 21/41 (51.22%), Postives = 25/41 (60.98%), Query Frame = -2 Query: 268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390 ++DRDS W +HQ DP R FR RHGS+R SQNR Sbjct: 366 QVDRDSGWSTFHQAGGGPDPGIR---FRQRHGSERMSSQNR 403
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Match: B9N4J3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837174 PE=4 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 5.685e-12 Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = -2 Query: 268 KLDRDSSWRPYHQNANRSDPSTRLSSFRLRHGSDRTPSQNR 390 ++DRDS +HQ SDPS R SFR RHGS+R SQNR Sbjct: 391 QVDRDSGRSTFHQAGGGSDPSIRSGSFRQRHGSERMSSQNR 431 HSP 2 Score: 45.8246 bits (107), Expect = 5.685e-12 Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = -1 Query: 389 SPDQSGGFFLIPSSSSGRNYQE-ENHLPSRFHAWERDHLPSLSLNQ 523 S GF+ IPS +S RN+QE EN P+RF +WE HLP S++Q Sbjct: 347 STSDQTGFYFIPSGASSRNFQEAENPPPTRFRSWE-SHLPPFSVSQ 391 The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig975 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 5
Sequences
The
following sequences are available for this feature:
contig sequence >Pisum_sativum_v1_Contig975 ID=Pisum_sativum_v1_Contig975; Name=Pisum_sativum_v1_Contig975; organism=Pisum sativum; type=contig; length=526bpback to top |