Pisum_sativum_v1_Contig983

Contig Overview


Name	Pisum_sativum_v1_Contig983
Unique Name	Pisum_sativum_v1_Contig983
Type	contig
Organism	Pisum sativum (pea)
Sequence length	922

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
FG538918	EST	FG538918:80..244 +	Pisum sativum unigene v1	n/a
FG530171	EST	FG530171:1..530 +	Pisum sativum unigene v1	n/a
FG532465	EST	FG532465:470..922 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FG538918	FG538918	Pisum sativum	EST
FG530171	FG530171	Pisum sativum	EST
FG532465	FG532465	Pisum sativum	EST

Homology

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BLAST of Pisum_sativum_v1_Contig983 vs. SwissProt
Match: SF3B1_MOUSE (Splicing factor 3B subunit 1 OS=Mus musculus GN=Sf3b1 PE=1 SV=1)

HSP 1 Score: 559.296 bits (1440), Expect = 1.117e-158
Identity = 275/305 (90.16%), Postives = 290/305 (95.08%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EE+LMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE+LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G   +L YCLQGLFHPARKVR+VYWKIYNS
Sbjct:  967 EEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNS 1271

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. SwissProt
Match: SF3B1_HUMAN (Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF3B1 PE=1 SV=3)

HSP 1 Score: 559.296 bits (1440), Expect = 1.117e-158
Identity = 275/305 (90.16%), Postives = 290/305 (95.08%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EE+LMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE+LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G   +L YCLQGLFHPARKVR+VYWKIYNS
Sbjct:  967 EEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNS 1271

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. SwissProt
Match: SF3B1_XENLA (Splicing factor 3B subunit 1 OS=Xenopus laevis GN=sf3b1 PE=2 SV=1)

HSP 1 Score: 558.14 bits (1437), Expect = 2.488e-158
Identity = 274/305 (89.84%), Postives = 290/305 (95.08%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EE+LMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE+LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G   ++ YCLQGLFHPARKVR+VYWKIYNS
Sbjct:  970 EEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMVQYCLQGLFHPARKVRDVYWKIYNS 1274

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. SwissProt
Match: SF3B1_SCHPO (U2 snRNP component prp10 OS=Schizosaccharomyces pombe GN=prp10 PE=1 SV=2)

HSP 1 Score: 490.345 bits (1261), Expect = 6.370e-138
Identity = 235/305 (77.05%), Postives = 268/305 (87.87%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EE LM  LGVVLYEYLGEEYPEVLGSILGA K+IV+V+GM+ M PPI+DLLPRLTPIL+NRHEKVQEN IDLVG+IADRG+E+V AREWMRICFEL++MLKAHKK IRRA VNTFGYI+KAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETC PFTV+PALM +YR PE+NVQNGVLKSL+F+FEYIGE  +DY+YA+TPLL DALMDRD VHRQTAAS +KH++LG  GLG EDA++HLLN +WPNI E SPHVINAV E I+G+R  +G   ++ Y +QGLFHP+RKVR  YW  YNS
Sbjct:  851 EEALMRKLGVVLYEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKVQENTIDLVGKIADRGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYISKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCMPFTVVPALMADYRTPEMNVQNGVLKSLAFMFEYIGEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHLLNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRKVRNTYWTSYNS 1155

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BLAST of Pisum_sativum_v1_Contig983 vs. SwissProt
Match: SF3B1_YEAST (U2 snRNP component HSH155 OS=Saccharomyces cerevisiae GN=HSH155 PE=1 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 2.443e-105
Identity = 180/306 (58.82%), Postives = 228/306 (74.51%), Query Frame = 1

Query:    4 HEEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            HE +++  L ++LYE LGE YPEVLGSI+ A   I +V+ + K+ PPI  +LP LTPIL+N+H KV+ N I  VG I      + P +EWMRICFELLE+LK+  K IRR+   TFG+IA+AIGP DVL  LLNNLKVQERQ RVCT VAI IVA+ C P+ VLP +MNEY  PE NVQNGVLK++SF+FEYIG M KDYIY +TPLLEDAL DRDLVHRQTA++ + H+AL  +G G EDA +HL+N + PNIFETSPH I  ++E +E +  ALG  + +NY   GLFHPA+ VR+ +W++YN+
Sbjct:  635 HEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITSVMDLDKLQPPINQILPTLTPILRNKHRKVEVNTIKFVGLIGKLAPTYAPPKEWMRICFELLELLKSTNKEIRRSANATFGFIAEAIGPHDVLVALLNNLKVQERQLRVCTAVAIGIVAKVCGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYIYFITPLLEDALTDRDLVHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKNVRKAFWRVYNN 940

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BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: B9IJD5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_577374 PE=4 SV=1)

HSP 1 Score: 606.29 bits (1562), Expect = 1.267e-171
Identity = 303/305 (99.34%), Postives = 304/305 (99.67%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  930 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 1234

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: C5XUM0_SORBI (Putative uncharacterized protein Sb04g003370 OS=Sorghum bicolor GN=Sb04g003370 PE=4 SV=1)

HSP 1 Score: 605.905 bits (1561), Expect = 1.654e-171
Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  943 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNS 1247

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BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: B9SIK7_RICCO (Splicing factor 3B subunit, putative OS=Ricinus communis GN=RCOM_0821880 PE=4 SV=1)

HSP 1 Score: 605.905 bits (1561), Expect = 1.654e-171
Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDAL+HLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  892 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 1196

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: Q9FMF9_ARATH (Nuclear protein-like OS=Arabidopsis thaliana GN=At5g64270 PE=1 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 6.286e-171
Identity = 300/305 (98.36%), Postives = 304/305 (99.67%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLN++WPNIFETSPHVINAVMEAIEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  932 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVMEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNS 1236

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: Q0E3Z8_ORYSJ (Os02g0146400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0146400 PE=4 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 6.286e-171
Identity = 301/305 (98.69%), Postives = 303/305 (99.34%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG AV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:   21 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGPAVILNYCLQGLFHPARKVREVYWKIYNS 325

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: Q0E3Z1_ORYSJ (Os02g0147300 protein OS=Oryza sativa subsp. japonica GN=Os02g0147300 PE=4 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 6.286e-171
Identity = 301/305 (98.69%), Postives = 303/305 (99.34%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG AV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  821 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGPAVILNYCLQGLFHPARKVREVYWKIYNS 1125

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: D7MR97_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496629 PE=4 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 6.286e-171
Identity = 300/305 (98.36%), Postives = 304/305 (99.67%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLN++WPNIFETSPHVINAVMEAIEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  927 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVMEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNS 1231

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: B8AHR1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05843 PE=4 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 6.286e-171
Identity = 301/305 (98.69%), Postives = 303/305 (99.34%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG AV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  185 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGPAVILNYCLQGLFHPARKVREVYWKIYNS 489

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: A3A338_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_05362 PE=4 SV=1)

HSP 1 Score: 603.979 bits (1556), Expect = 6.286e-171
Identity = 301/305 (98.69%), Postives = 303/305 (99.34%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG AV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  946 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGPAVILNYCLQGLFHPARKVREVYWKIYNS 1250

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Match: A9RIM7_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175218 PE=4 SV=1)

HSP 1 Score: 601.668 bits (1550), Expect = 3.119e-170
Identity = 297/306 (97.06%), Postives = 303/306 (99.02%), Query Frame = 1

Query:    4 HEEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            HEEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELL+MLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDAL+HLLNY+WPNIFETSPHVINAVMEAIEGMRVALG  ++LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  954 HEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLDMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYLWPNIFETSPHVINAVMEAIEGMRVALGPTILLNYCLQGLFHPARKVREVYWKIYNS 1259

[Close]

BLAST of Pisum_sativum_v1_Contig983 vs. TAIR peptide
Match: AT5G64270.1 (| Symbols: | splicing factor, putative | chr5:25706909-25710718 FORWARD LENGTH=1269)

HSP 1 Score: 603.979 bits (1556), Expect = 3.848e-173
Identity = 300/305 (98.36%), Postives = 304/305 (99.67%), Query Frame = 1

Query:    7 EEQLMGHLGVVLYEYLGEEYPEVLGSILGAPKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 921
            EEQLMGHLGVVLYEYLGEEYPEVLGSILGA K+IVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLN++WPNIFETSPHVINAVMEAIEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNS
Sbjct:  932 EEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVMEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNS 1236

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig983 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig983 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig983 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
SF3B1_MOUSE	1.117e-158	90.16	Splicing factor 3B subunit 1 OS=Mus musculus GN=Sf...	[more]
SF3B1_HUMAN	1.117e-158	90.16	Splicing factor 3B subunit 1 OS=Homo sapiens GN=SF...	[more]
SF3B1_XENLA	2.488e-158	89.84	Splicing factor 3B subunit 1 OS=Xenopus laevis GN=...	[more]
SF3B1_SCHPO	6.370e-138	77.05	U2 snRNP component prp10 OS=Schizosaccharomyces po...	[more]
SF3B1_YEAST	2.443e-105	58.82	U2 snRNP component HSH155 OS=Saccharomyces cerevis...	[more]

BLAST of Pisum_sativum_v1_Contig983 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9IJD5_POPTR	1.267e-171	99.34	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C5XUM0_SORBI	1.654e-171	99.02	Putative uncharacterized protein Sb04g003370 OS=So...	[more]
B9SIK7_RICCO	1.654e-171	99.02	Splicing factor 3B subunit, putative OS=Ricinus co...	[more]
Q9FMF9_ARATH	6.286e-171	98.36	Nuclear protein-like OS=Arabidopsis thaliana GN=At...	[more]
Q0E3Z8_ORYSJ	6.286e-171	98.69	Os02g0146400 protein (Fragment) OS=Oryza sativa su...	[more]
Q0E3Z1_ORYSJ	6.286e-171	98.69	Os02g0147300 protein OS=Oryza sativa subsp. japoni...	[more]
D7MR97_ARALY	6.286e-171	98.36	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B8AHR1_ORYSI	6.286e-171	98.69	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A3A338_ORYSJ	6.286e-171	98.69	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A9RIM7_PHYPA	3.119e-170	97.06	Predicted protein OS=Physcomitrella patens subsp. ...	[more]

BLAST of Pisum_sativum_v1_Contig983 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G64270.1	3.848e-173	98.36	\| Symbols: \| splicing factor, putative \| chr5:257...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10	no description	coord: 4..216 score: 1.8
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 13..306 score: 5.9
None	No IPR available	PANTHER	PTHR12097	SPLICING FACTOR 3B, SUBUNIT 1-RELATED	coord: 2..307 score: 2.3e
None	No IPR available	SEG	seg	seg	coord: 26..37 score
None	No IPR available	SEG	seg	seg	coord: 23..33 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig983 ID=Pisum_sativum_v1_Contig983; Name=Pisum_sativum_v1_Contig983; organism=Pisum sativum; type=contig; length=922bp
TGGCACGAGGAACAATTGATGGGTCATCTTGGTGTTGTCTTGTATGAGTA
TCTTGGAGAAGAGTATCCAGAAGTTCTAGGTTCAATTTTGGGTGCTCCCA
AGTCAATTGTTAATGTTATTGGTATGACGAAGATGACTCCACCTATTAAA
GATTTGCTTCCCAGATTGACTCCAATTTTGAAGAACAGGCATGAAAAAGT
CCAGGAGAACTGTATTGACCTTGTTGGTAGGATTGCTGATCGTGGGGCTG
AGTTTGTACCGGCCAGGGAATGGATGAGGATCTGTTTTGAGCTTCTTGAG
ATGCTTAAGGCACACAAGAAGGGAATACGTAGAGCTACGGTGAACACTTT
TGGATATATTGCAAAAGCCATCGGACCACAGGATGTCTTGGCAACTCTAT
TGAATAATCTCAAGGTGCAGGAGAGGCAGAATCGTGTATGCACTACTGTG
GCCATTGCAATAGTTGCAGAAACATGTTCACCCTTCACAGTTTTGCCAGC
ATTGATGAATGAGTACCGTGTGCCTGAGCTTAATGTGCAAAATGGAGTTC
TCAAGTCTCTCTCCTTCCTCTTTGAGTATATTGGTGAAATGGGAAAGGAC
TACATCTACGCCGTGACTCCTTTGCTCGAGGATGCTCTTATGGACAGGGA
TTTGGTTCATAGGCAGACAGCTGCATCTGCCGTGAAGCACATGGCACTGG
GAGTGGCTGGTTTGGGTTGTGAGGATGCGCTGGTCCACTTGCTGAACTAT
GTCTGGCCAAACATATTTGAAACTTCTCCACATGTGATAAATGCTGTGAT
GGAAGCCATTGAAGGGATGAGGGTAGCCTTAGGTGCTGCTGTTGTTCTTA
ATTACTGTCTCCAAGGGCTGTTCCACCCCGCCCGAAAAGTTAGAGAGGTG
TATTGGAAGATTTATAACTCAC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Search form

Pisum_sativum_v1_Contig983