Pisum_sativum_v1_Contig990

Contig Overview
NamePisum_sativum_v1_Contig990
Unique NamePisum_sativum_v1_Contig990
Typecontig
OrganismPisum sativum (pea)
Sequence length831
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FG530145ESTFG530145:1..674 +Pisum sativum unigene v1n/a
FG530005ESTFG530005:1..682 +Pisum sativum unigene v1n/a
FG535530ESTFG535530:269..831 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG530145FG530145Pisum sativumEST
FG530005FG530005Pisum sativumEST
FG535530FG535530Pisum sativumEST


Homology
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BLAST of Pisum_sativum_v1_Contig990 vs. SwissProt
Match: E6_GOSHI (Protein E6 OS=Gossypium hirsutum GN=E6 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.821e-9
Identity = 46/145 (31.72%), Postives = 64/145 (44.14%), Query Frame = 1 
Query:   10 FIPQTENSYGLYGHES-DHLPTNTAATNSEFEXXXXXXXXXXXXXXXXXXDPFGN------NQNELSDTKYNGEG---YNYNSMMEKQXXXXXXXXXXXXXXXGEKQGMSDTRFLEGGKYFHDINNE-KYNPTMYGDSYSKGVST 411
            FIP+T+N YGLYGHES    P+ T  T   +E                  +   N      N+N    TK    G   +       K+               GEKQGMSDTR+LE GKY++D+ +E  Y P  + +  S+GV++
Sbjct:   67 FIPETQNGYGLYGHESGSSRPSFT--TKETYEPYVTPVRFHPDEPYNSIPESSNNKDTYYYNKNAYESTKQQNLGEAIFTEKGWSTKENQNNNYYNGNNGYNNGEKQGMSDTRYLENGKYYYDVKSENNYYPNRFDN--SRGVAS 207
[Close]
BLAST of Pisum_sativum_v1_Contig990 vs. TrEMBL
Match: C6TKC2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.304e-17
Identity = 65/180 (36.11%), Postives = 79/180 (43.89%), Query Frame = 1 
Query:   10 FIPQTENSYGLYGH--ESDHLPTNTAAT-----------------NSEFEXXXXXXXXXXXXXXXXXXDPFGNNQNELSDTKYNGEGYN---------------------YNSMMEKQXXXXXXXXXXXXXXX------GEKQGMSDTRFLEGGKYFHDINNEKYNPTMYGDSYSKGVST 411
            FIP+TENSYGLYGH  ES+ +P+ T  +                 N  +                   D +  NQ ELSDTKY  EGYN                     YN+    +                     GE+QGMSDTRFLEGGKYF+D+  EKYNPT YGDS S+ V+T
Sbjct:   63 FIPETENSYGLYGHHDESNQVPSTTPTSYHPYKTKFENSNNKYYSNDAYNTRFSETSYNNNNNKYYNKDSYEGNQYELSDTKYTEEGYNNKYHNSYQNNYNNDAANDKYSYNNNNNNKNYNAHNNRYNTYNNNAVSRYNGERQGMSDTRFLEGGKYFYDVGAEKYNPTNYGDS-SREVNT 241
[Close]
BLAST of Pisum_sativum_v1_Contig990 vs. TrEMBL
Match: C6TJ93_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.309e-9
Identity = 44/115 (38.26%), Postives = 56/115 (48.70%), Query Frame = 1 
Query:  157 DPFGNNQNELSDTKYNGEGYNY-----------------------------NSMMEKQXXXXXXXXXXXXXXXGEKQGMSDTRFLEGGKYFHDINNEKYN-PTMYGDSYSKGVST 411
            D FG  QNELSDTKY  EGYN                              N+  +                 GE+QG+SDTRF+EGGKYF+D+ +EKYN PT YG S ++GV++
Sbjct:  224 DAFGK-QNELSDTKYTEEGYNSVENQNNNNNNNKYYYNNDQAANEKYFYNNNNNDDAANNRYYKTKSANSNYNGERQGLSDTRFIEGGKYFYDVKSEKYNHPTQYGGS-TRGVNS 336
[Close]
BLAST of Pisum_sativum_v1_Contig990 vs. TrEMBL
Match: B6E138_GOSHI (E6-1 protein kinase OS=Gossypium hirsutum GN=E6-1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.355e-8
Identity = 46/145 (31.72%), Postives = 64/145 (44.14%), Query Frame = 1 
Query:   10 FIPQTENSYGLYGHES-DHLPTNTAATNSEFEXXXXXXXXXXXXXXXXXXDPFGN------NQNELSDTKYNGEG---YNYNSMMEKQXXXXXXXXXXXXXXXGEKQGMSDTRFLEGGKYFHDINNE-KYNPTMYGDSYSKGVST 411
            FIP+T+N YGLYGHES    P+ T  T   +E                  +   N      N+N    TK    G   +       K+               GEKQGMSDTR+LE GKY++D+ +E  Y P  + +  S+GV++
Sbjct:   67 FIPETQNGYGLYGHESGSSRPSFT--TKETYEPYVTPVRFHPDEPYNSIPESSNNKDTYYYNKNAYESTKQQNLGEAIFTEKGWSTKENQNNNYYNGNNGYNNGEKQGMSDTRYLENGKYYYDVKSENNYYPNRFDN--SRGVAS 207
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig990 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
E6_GOSHI2.821e-931.72Protein E6 OS=Gossypium hirsutum GN=E6 PE=2 SV=1[more]
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BLAST of Pisum_sativum_v1_Contig990 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C6TKC2_SOYBN2.304e-1736.11Putative uncharacterized protein OS=Glycine max PE... [more]
C6TJ93_SOYBN2.309e-938.26Putative uncharacterized protein OS=Glycine max PE... [more]
B6E138_GOSHI4.355e-831.72E6-1 protein kinase OS=Gossypium hirsutum GN=E6-1 ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 35..52
score: NAcoord: 82..96
score: NAcoord: 138..176
score
NoneNo IPR availableSEGsegsegcoord: 21..51
score
NoneNo IPR availableSEGsegsegcoord: 36..74
score
NoneNo IPR availableSEGsegsegcoord: 8..60
score
NoneNo IPR availableSEGsegsegcoord: 34..41
score: NAcoord: 77..106
score
NoneNo IPR availableSEGsegsegcoord: 45..55
score
NoneNo IPR availableSEGsegsegcoord: 26..38
score: NAcoord: 42..57
score: NAcoord: 71..87
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig990 ID=Pisum_sativum_v1_Contig990; Name=Pisum_sativum_v1_Contig990; organism=Pisum sativum; type=contig; length=831bp
ACAACATCTTTCATCCCTCAAACTGAAAACAGCTATGGCTTATATGGCCA
TGAATCCGATCACCTTCCAACAAACACCGCCGCAACAAACTCCGAGTTCG
AAAACAACAACAAGTACTACAACAACGATGCCTATAACACAAAGTACTAC
AACAAGGATCCTTTTGGAAATAACCAAAATGAGTTGAGTGACACAAAGTA
CAATGGAGAAGGTTACAATTACAACTCCATGATGGAAAAACAAAACAACA
ATGAAAGACCACTCTACAACAACAATAATTATTACAATGGTGAGAAACAA
GGGATGAGTGACACAAGATTCTTGGAAGGTGGAAAATATTTCCATGATAT
TAACAATGAGAAATACAATCCAACAATGTATGGCGATTCATATTCTAAAG
GAGTTAGCACAAATAATTGGTACAACAACCGAGGTAACAGCTATAACTCT
AACAACAATGGTAACAACAATGGTTACAACAATGAATACTACCAGAATAA
CCATGGCAACTACAATGGTTATAAGAACCAAGAGGTGAATCAGTTTGAAG
ATGAACAAAATGAGTTTGAGCCATGAGAATTTGGTTTGGGATCATTAGCA
AAATGAAGAATTCATTTTACTTTTGAAGTGTTTCTTGTGTGGGCTTTTTC
TATGTTTTACTGTGCTAATTTGGATTAAAAAAACAGATTAAAGAATATAT
AAGTTAATTAATTATATTATGAAAGTTTTTTGTTTTGTTTTTACATTAGT
TGTATTTCTATATACTGTCTTGTTTCTGTTATTGAAATGTTTTATTTTGA
AGTACAAGATTAATTTGTTTGTTTTTTCTTT
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