Pisum_sativum_v1_Contig996

Contig Overview
NamePisum_sativum_v1_Contig996
Unique NamePisum_sativum_v1_Contig996
Typecontig
OrganismPisum sativum (pea)
Sequence length607
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
FG537009ESTFG537009:15..444 +Pisum sativum unigene v1n/a
FG530121ESTFG530121:1..566 +Pisum sativum unigene v1n/a
FG535949ESTFG535949:1..607 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG537009FG537009Pisum sativumEST
FG530121FG530121Pisum sativumEST
FG535949FG535949Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: B9S4G3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690110 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.048e-21
Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 1
Query:    1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSE--LSC 243
            +SEEEKQLESWLNQ+K+ QL CDQGLQ+  W+  +G QQ  TSEN++R  + D++E+ELAV AAAASIYSTC+ L+S+  +SC
Sbjct:  510 LSEEEKQLESWLNQVKEMQLHCDQGLQNFLWNPMFGFQQQETSENYTRIGKADSTERELAVRAAAASIYSTCSLLMSKENVSC 592          
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: D7T4C3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032673001 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.184e-18
Identity = 48/81 (59.26%), Postives = 59/81 (72.84%), Query Frame = 1
Query:    7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLS--ELSC 243
            EEEKQLESWLNQ+K+ Q+ C++GLQH  W+  +  Q   T  N  R   VD+SE+ELA+ AAAASIYSTCNFLLS   +SC
Sbjct:  479 EEEKQLESWLNQVKEMQMHCERGLQHFQWNLPH-WQHPGTIINDPRPQMVDDSERELAIRAAAASIYSTCNFLLSMENVSC 558          
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: B9IQ59_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574117 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.040e-16
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1
Query:    1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSE--LSC 243
            +SEEEKQLE+WL+Q+K+ Q+ CDQGLQH++++   G         + R+ + D+S+KELAV AAAASIYSTCNFL S+  +SC
Sbjct:  508 LSEEEKQLETWLSQVKEMQVHCDQGLQHLHYNAILG---------YPRTEKADSSQKELAVRAAAASIYSTCNFLSSKENVSC 581          
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: B9I8E2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_663449 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.162e-12
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1
Query:    7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSE--LSC 243
            EEEKQLE WL Q+K+ Q+  DQGLQH+++    G         + R+ + D+ +KELAV AAAASIYSTCNFL S+  +SC
Sbjct:  129 EEEKQLERWLCQVKEMQVHFDQGLQHLSYKAILG---------YPRTEKADSLQKELAVRAAAASIYSTCNFLTSKENVSC 200          
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: A5BR42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024205 PE=4 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 1.878e-10
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 1
Query:    7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWS 96
            EEEKQLESWLNQ+K+ Q+ C++GLQH  W+
Sbjct:  647 EEEKQLESWLNQVKEMQMHCERGLQHFQWN 676          

HSP 2 Score: 37.7354 bits (86), Expect = 1.878e-10
Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 2
Query:  143 DHPK*TTQRKS*LLMQQQLPYTQHAIFYCQ--S*VAFDIESKC 265
            DH   TTQR + LL Q QLP+TQ A FYCQ    +A D+ + C
Sbjct:  715 DHRWWTTQRGNWLLGQLQLPFTQPATFYCQWKMYLASDLVNSC 757          
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: D7LYC2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_325157 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 3.868e-8
Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 1
Query:    1 ISEEEKQL--------ESWLNQIKDKQLLCDQGLQHVNWSKA-------------YGLQQSATSENH-------SRSSQVDNSEKELAVNAAAASIYSTCNFLLSELSC 243
            +SEEE QL        ESWLNQ++  Q  CDQGLQH++ S               YG   + +S  H        R+     S+K+L + AAAASI+STC+FL   ++C
Sbjct:  453 LSEEESQLFVNFENIQESWLNQVRYLQSHCDQGLQHLSLSSGQNFLHLGMPLDSRYGHFTTYSSHYHFLLFKLCCRAVNALMSDKDLVIKAAAASIFSTCSFLEENITC 561          
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: C5XTV3_SORBI (Putative uncharacterized protein Sb04g002670 OS=Sorghum bicolor GN=Sb04g002670 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.919e-7
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 1
Query:    1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNW-SKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLL 228
            + EE KQLE+ L Q+++ QL CD+GL+H+   +   G        N+      DNSE E AV AAAASIYSTCN ++
Sbjct:  483 LQEEGKQLENRLKQVQEMQLNCDKGLKHMTCEAPLLGPMAELWKLNNP-----DNSESEWAVQAAAASIYSTCNMVM 554          
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: D7LF64_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483120 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 7.294e-7
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query:    7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLS 231
            +E++ LE  LNQ+K+ Q  C++GL+ +   + Y    S +SE+  R     N E  +AV AAAASI+STC+FLLS
Sbjct:  464 DEQRDLERSLNQVKEMQSRCNEGLRQM---EEYSPFSSQSSESSFRKD--GNQETSMAVQAAAASIFSTCSFLLS 533          
BLAST of Pisum_sativum_v1_Contig996 vs. TAIR peptide
Match: AT5G05240.1 (| Symbols: | Uncharacterised conserved protein (UCP030365) | chr5:1554023-1556230 REVERSE LENGTH=530)

HSP 1 Score: 76.6406 bits (187), Expect = 1.123e-14
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 1
Query:    1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSELSC 243
            +SEEE QLESWLNQ++  Q  CD+GLQH++ S      Q     + SR++    S+K+L + AAAASIYSTC+FL   ++C
Sbjct:  450 LSEEESQLESWLNQVRYMQSHCDEGLQHLSLSSGQNFLQLGMPLD-SRAANALISDKDLVIKAAAASIYSTCSFLEENITC 529          
BLAST of Pisum_sativum_v1_Contig996 vs. TAIR peptide
Match: AT2G40630.1 (| Symbols: | Uncharacterised conserved protein (UCP030365) | chr2:16958442-16960942 FORWARD LENGTH=535)

HSP 1 Score: 55.8398 bits (133), Expect = 2.050e-8
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1
Query:    7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLS 231
            +E++ LE  LNQ+K+ Q  C+ GL+ +     +  Q S +S          N E  +AV AAAASI+STC+FLLS
Sbjct:  457 DEQRDLERSLNQVKEMQSRCNHGLRQMEEYSPFSSQSSDSSFGKD-----GNQETSMAVQAAAASIFSTCSFLLS 526          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9S4G3_RICCO1.048e-2161.45Putative uncharacterized protein OS=Ricinus commun... [more]
D7T4C3_VITVI9.184e-1859.26Whole genome shotgun sequence of line PN40024, sca... [more]
B9IQ59_POPTR5.040e-1654.22Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9I8E2_POPTR1.162e-1251.85Predicted protein (Fragment) OS=Populus trichocarp... [more]
A5BR42_VITVI1.878e-1066.67Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LYC2_ARALY3.868e-837.61Putative uncharacterized protein OS=Arabidopsis ly... [more]
C5XTV3_SORBI1.919e-745.45Putative uncharacterized protein Sb04g002670 OS=So... [more]
D7LF64_ARALY7.294e-744.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of Pisum_sativum_v1_Contig996 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G05240.11.123e-1448.15| Symbols: | Uncharacterised conserved protein (U... [more]
AT2G40630.12.050e-841.33| Symbols: | Uncharacterised conserved protein (U... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig996 ID=Pisum_sativum_v1_Contig996; Name=Pisum_sativum_v1_Contig996; organism=Pisum sativum; type=contig; length=607bp
ATATCAGAAGAGGAAAAACAACTTGAAAGTTGGTTGAATCAAATAAAAGA
CAAGCAATTGCTATGTGATCAGGGCCTGCAACATGTTAACTGGAGTAAGG
CTTATGGTTTACAACAGTCGGCAACTTCAGAAAATCACTCCAGATCATCC
CAAGTAGACAACTCAGAGAAAGAGTTAGCTGTTAATGCAGCAGCAGCTTC
CATATACTCAACATGCAATTTTCTACTGTCAGAGTTAAGTTGCATTTGAC
ATTGAGTCTAAATGTCATTGTTGTTGTTAATTGCTGATCGCGGAAAATAT
CAGTTTGTTCACATTTTGCAATGCTACAATGCTATGGCGCATTTATAGCC
GCTATTTGGAAGCACTTTGTACTAAACAGTGTATTGCGGAACAATGATGA
TCTGTTCAGATTCTGCATTGCTATAGCGCGATAATGCCTGCTATAGCTGC
TATTTCACAACACTAGTCATATGTTCAACTTATTATGTTGGTTGTCATTT
TCTCTTTTCTCCTTAATGAGTTGAGATTGCTTTAGCAATTGCCATTGGTA
TGTAGAACAATTGTAGTTTAGGTTTTGGCATATGAACAAGTTTTGATACT
TGTTGTG
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