Pisum_sativum_v1_Contig996
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: B9S4G3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0690110 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.048e-21 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 1 Query: 1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSE--LSC 243 +SEEEKQLESWLNQ+K+ QL CDQGLQ+ W+ +G QQ TSEN++R + D++E+ELAV AAAASIYSTC+ L+S+ +SC Sbjct: 510 LSEEEKQLESWLNQVKEMQLHCDQGLQNFLWNPMFGFQQQETSENYTRIGKADSTERELAVRAAAASIYSTCSLLMSKENVSC 592
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: D7T4C3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032673001 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.184e-18 Identity = 48/81 (59.26%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLS--ELSC 243 EEEKQLESWLNQ+K+ Q+ C++GLQH W+ + Q T N R VD+SE+ELA+ AAAASIYSTCNFLLS +SC Sbjct: 479 EEEKQLESWLNQVKEMQMHCERGLQHFQWNLPH-WQHPGTIINDPRPQMVDDSERELAIRAAAASIYSTCNFLLSMENVSC 558
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: B9IQ59_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574117 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.040e-16 Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSE--LSC 243 +SEEEKQLE+WL+Q+K+ Q+ CDQGLQH++++ G + R+ + D+S+KELAV AAAASIYSTCNFL S+ +SC Sbjct: 508 LSEEEKQLETWLSQVKEMQVHCDQGLQHLHYNAILG---------YPRTEKADSSQKELAVRAAAASIYSTCNFLSSKENVSC 581
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: B9I8E2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_663449 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.162e-12 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSE--LSC 243 EEEKQLE WL Q+K+ Q+ DQGLQH+++ G + R+ + D+ +KELAV AAAASIYSTCNFL S+ +SC Sbjct: 129 EEEKQLERWLCQVKEMQVHFDQGLQHLSYKAILG---------YPRTEKADSLQKELAVRAAAASIYSTCNFLTSKENVSC 200
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: A5BR42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024205 PE=4 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 1.878e-10 Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 1 Query: 7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWS 96 EEEKQLESWLNQ+K+ Q+ C++GLQH W+ Sbjct: 647 EEEKQLESWLNQVKEMQMHCERGLQHFQWN 676 HSP 2 Score: 37.7354 bits (86), Expect = 1.878e-10 Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 2 Query: 143 DHPK*TTQRKS*LLMQQQLPYTQHAIFYCQ--S*VAFDIESKC 265 DH TTQR + LL Q QLP+TQ A FYCQ +A D+ + C Sbjct: 715 DHRWWTTQRGNWLLGQLQLPFTQPATFYCQWKMYLASDLVNSC 757
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: D7LYC2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_325157 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 3.868e-8 Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 1 Query: 1 ISEEEKQL--------ESWLNQIKDKQLLCDQGLQHVNWSKA-------------YGLQQSATSENH-------SRSSQVDNSEKELAVNAAAASIYSTCNFLLSELSC 243 +SEEE QL ESWLNQ++ Q CDQGLQH++ S YG + +S H R+ S+K+L + AAAASI+STC+FL ++C Sbjct: 453 LSEEESQLFVNFENIQESWLNQVRYLQSHCDQGLQHLSLSSGQNFLHLGMPLDSRYGHFTTYSSHYHFLLFKLCCRAVNALMSDKDLVIKAAAASIFSTCSFLEENITC 561
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: C5XTV3_SORBI (Putative uncharacterized protein Sb04g002670 OS=Sorghum bicolor GN=Sb04g002670 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.919e-7 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNW-SKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLL 228 + EE KQLE+ L Q+++ QL CD+GL+H+ + G N+ DNSE E AV AAAASIYSTCN ++ Sbjct: 483 LQEEGKQLENRLKQVQEMQLNCDKGLKHMTCEAPLLGPMAELWKLNNP-----DNSESEWAVQAAAASIYSTCNMVM 554
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Match: D7LF64_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483120 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 7.294e-7 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLS 231 +E++ LE LNQ+K+ Q C++GL+ + + Y S +SE+ R N E +AV AAAASI+STC+FLLS Sbjct: 464 DEQRDLERSLNQVKEMQSRCNEGLRQM---EEYSPFSSQSSESSFRKD--GNQETSMAVQAAAASIFSTCSFLLS 533
BLAST of Pisum_sativum_v1_Contig996 vs. TAIR peptide
Match: AT5G05240.1 (| Symbols: | Uncharacterised conserved protein (UCP030365) | chr5:1554023-1556230 REVERSE LENGTH=530) HSP 1 Score: 76.6406 bits (187), Expect = 1.123e-14 Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 1 ISEEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLSELSC 243 +SEEE QLESWLNQ++ Q CD+GLQH++ S Q + SR++ S+K+L + AAAASIYSTC+FL ++C Sbjct: 450 LSEEESQLESWLNQVRYMQSHCDEGLQHLSLSSGQNFLQLGMPLD-SRAANALISDKDLVIKAAAASIYSTCSFLEENITC 529
BLAST of Pisum_sativum_v1_Contig996 vs. TAIR peptide
Match: AT2G40630.1 (| Symbols: | Uncharacterised conserved protein (UCP030365) | chr2:16958442-16960942 FORWARD LENGTH=535) HSP 1 Score: 55.8398 bits (133), Expect = 2.050e-8 Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 7 EEEKQLESWLNQIKDKQLLCDQGLQHVNWSKAYGLQQSATSENHSRSSQVDNSEKELAVNAAAASIYSTCNFLLS 231 +E++ LE LNQ+K+ Q C+ GL+ + + Q S +S N E +AV AAAASI+STC+FLLS Sbjct: 457 DEQRDLERSLNQVKEMQSRCNHGLRQMEEYSPFSSQSSDSSFGKD-----GNQETSMAVQAAAASIFSTCSFLLS 526 The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig996 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 8
BLAST of Pisum_sativum_v1_Contig996 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
Sequences
The
following sequences are available for this feature:
contig sequence >Pisum_sativum_v1_Contig996 ID=Pisum_sativum_v1_Contig996; Name=Pisum_sativum_v1_Contig996; organism=Pisum sativum; type=contig; length=607bpback to top |