GWAS0000366 | PulseDB

Genome Location

GWAS Overview


GWAS Label	GWAS0000366 [ MapViewer ]
Published Symbol	S1LG6_261934321_Stem diameter
Trait Name	Stem thickness
Trait Alias	N/A
GWAS Marker	S1LG6_261934321
GWAS Study	Pea-Ascochyta_blight-Martins-2022
Genome Assembly	Pisum sativum Cameor genome v1a
Statistical Mothod	N/A
Experimental Model	N/A
GWAS Panel	N/A
LOD	N/A
P Value	1.51E-6
R2	N/A
Unique key	4795-STTK.S1LG6_261934321_Stem diameter
MAF	0.19
Allele	T/C
Trait associated allele	C
Comments	N/A

Terms

The following terms have been associated with this GWAS:

Vocabulary: **Pulse Trait Ontology**
Term	Definition
MAIN:000138594	Stem thickness

Genome Location


Name	Type	Location	Analysis	MapViewer
chr1LG6	supercontig	chr1LG6:261934321..261934321	Pisum sativum Cameor genome v1a	View

Publications


Year	Publication
2022	Martins LB, Balint-Kurti P, Reberg-Horton SC. Genome-wide association study for morphological traits and resistance to Peryonella pinodes in the USDA pea single-plant plus collection.. G3 (Bethesda, Md.). 2022 Jul 06.

Properties


Property Name	Value
Unique key	4795-STTK.S1LG6_261934321_Stem diameter
Published symbol	S1LG6_261934321_Stem diameter
MAF	0.19
Allele	T/C
Trait associated allele	C
P value	1.51E-6