GWAS0000382 | PulseDB

Genome Location

GWAS Overview


GWAS Label	GWAS0000382 [ MapViewer ]
Published Symbol	S5LG3_561689517_Internode 2–3
Trait Name	Internode length
Trait Alias	N/A
GWAS Marker	S5LG3_561689517
GWAS Study	Pea-Ascochyta_blight-Martins-2022
Genome Assembly	Pisum sativum Cameor genome v1a
Statistical Mothod	N/A
Experimental Model	N/A
GWAS Panel	N/A
LOD	N/A
P Value	1.62E-7
R2	N/A
Unique key	4795-INLG.S5LG3_561689517_Internode 2–3
MAF	0.39
Allele	A/G
Trait associated allele	G
Comments	N/A

Terms

The following terms have been associated with this GWAS:

Vocabulary: **Pulse Trait Ontology**
Term	Definition
MAIN:000138571	Internode length

Genome Location


Name	Type	Location	Analysis	MapViewer
chr5LG3	supercontig	chr5LG3:561689517..561689517	Pisum sativum Cameor genome v1a	View

Publications


Year	Publication
2022	Martins LB, Balint-Kurti P, Reberg-Horton SC. Genome-wide association study for morphological traits and resistance to Peryonella pinodes in the USDA pea single-plant plus collection.. G3 (Bethesda, Md.). 2022 Jul 06.

Properties


Property Name	Value
Unique key	4795-INLG.S5LG3_561689517_Internode 2–3
Published symbol	S5LG3_561689517_Internode 2–3
MAF	0.39
Allele	A/G
Trait associated allele	G
P value	1.62E-7