GT619584

EST Overview
NameGT619584
Unique NameGT619584
TypeEST
OrganismLens culinaris (lentil)
Sequence length401
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT619584 vs. TrEMBL
Match: B9SZ26_RICCO (Sodium-bile acid cotransporter, putative OS=Ricinus communis GN=RCOM_0494130 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.462e-23
Identity = 52/65 (80.00%), Postives = 61/65 (93.85%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197
            DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHS+FGS+LAG+WR SLP++ KD
Sbjct:  340 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSVFGSLLAGVWRRSLPTQNKD 404          
BLAST of GT619584 vs. TrEMBL
Match: B9N7S4_POPTR (Bile acid:Na+ symporter family protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_274865 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.494e-23
Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197
            DV+SSRTISIEVGMQN+ LGVVLATKHFG+PLT VPCAVSSVCHSIFGS+LAGIWR S+P++  D
Sbjct:  203 DVASSRTISIEVGMQNSVLGVVLATKHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRRSVPAQNDD 267          
BLAST of GT619584 vs. TrEMBL
Match: A5B8X3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023946 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.254e-23
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197
            DVSSSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHS+FGS+LAGIWR S P +++D
Sbjct:  113 DVSSSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSVFGSVLAGIWRRSPPVKVQD 177          
BLAST of GT619584 vs. TrEMBL
Match: Q9SYM6_ARATH (T30F21.11 protein OS=Arabidopsis thaliana GN=T30F21.11 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.238e-22
Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197
            DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS+LAGIWR S P +++D
Sbjct:  120 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQLED 184          
BLAST of GT619584 vs. TrEMBL
Match: Q93YR2_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At1g78560 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.238e-22
Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197
            DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS+LAGIWR S P +++D
Sbjct:  337 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQLED 401          
BLAST of GT619584 vs. TrEMBL
Match: D7KVC3_ARALY (Bile acid:sodium symporter family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895757 PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.111e-22
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197
            DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS LAGIWR S P +I+D
Sbjct:  335 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSALAGIWRRSAPKQIED 399          
BLAST of GT619584 vs. TrEMBL
Match: Q7XVB3_ORYSJ (OSJNBa0072D21.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0072D21.3 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194
            D+SSSRTISIEVGMQN+ LGVVLA+KHFG+PLT VPCAVSSVCHS++GS+LAGIWR SLP   K
Sbjct:  342 DISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWR-SLPPNDK 404          
BLAST of GT619584 vs. TrEMBL
Match: Q01LJ7_ORYSA (OSIGBa0092E09.1 protein OS=Oryza sativa GN=OSIGBa0092E09.1 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194
            D+SSSRTISIEVGMQN+ LGVVLA+KHFG+PLT VPCAVSSVCHS++GS+LAGIWR SLP   K
Sbjct:  342 DISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWR-SLPPNDK 404          
BLAST of GT619584 vs. TrEMBL
Match: C5WVA9_SORBI (Putative uncharacterized protein Sb01g016820 OS=Sorghum bicolor GN=Sb01g016820 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21
Identity = 49/64 (76.56%), Postives = 60/64 (93.75%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194
            D+SS+RTISIEVGMQN+ LG+VLATKHFG+PLT VPCAVSS+CHS++GSILAGIWR S+P++ K
Sbjct:  331 DISSARTISIEVGMQNSVLGLVLATKHFGNPLTAVPCAVSSICHSVYGSILAGIWR-SMPTKDK 393          
BLAST of GT619584 vs. TrEMBL
Match: B9FEU0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_14528 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194
            D+SSSRTISIEVGMQN+ LGVVLA+KHFG+PLT VPCAVSSVCHS++GS+LAGIWR SLP   K
Sbjct:  286 DISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWR-SLPPNDK 348          
BLAST of GT619584 vs. SwissProt
Match: YOCS_BACSU (Uncharacterized sodium-dependent transporter yocS OS=Bacillus subtilis GN=yocS PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.096e-9
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIW 167
            D  S + I+IEVGMQN+ LG  LAT HF  PL+ VP A+ SV H++ GS+LA  W
Sbjct:  250 DYPSQKAIAIEVGMQNSGLGAALATAHF-SPLSAVPSAIFSVWHNLSGSMLATYW 303          
BLAST of GT619584 vs. TAIR peptide
Match: AT1G78560.1 (| Symbols: | Sodium Bile acid symporter family | chr1:29546846-29548764 REVERSE LENGTH=401)

HSP 1 Score: 109.383 bits (272), Expect = 6.549e-25
Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 3
Query:    3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197
            DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS+LAGIWR S P +++D
Sbjct:  337 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQLED 401          
BLAST of GT619584 vs. TAIR peptide
Match: AT2G26900.1 (| Symbols: | Sodium Bile acid symporter family | chr2:11475156-11477870 REVERSE LENGTH=409)

HSP 1 Score: 69.3218 bits (168), Expect = 7.510e-13
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 3
Query:    9 SSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWR-FSLPSEIKD 197
            S+SRTISIE GMQ++ALG +LA KHF +PL  VP AVS VC ++ GS LA  WR   +P++ KD
Sbjct:  342 STSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSGLAVFWRNLPIPADDKD 405          
BLAST of GT619584 vs. TAIR peptide
Match: AT4G12030.1 (| Symbols: BAT5, BASS5 | bile acid transporter 5 | chr4:7211716-7212713 FORWARD LENGTH=273)

HSP 1 Score: 53.9138 bits (128), Expect = 3.265e-8
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 3
Query:   18 RTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWR 170
            RTIS E GMQ++ L + LATK F DPL  VP A+S+V  S+ G  L  IW+
Sbjct:  219 RTISYETGMQSSLLALALATKFFQDPLVGVPPAISTVVMSLMGVSLVTIWK 269          
BLAST of GT619584 vs. TAIR peptide
Match: AT4G12030.2 (| Symbols: BAT5, BASS5 | bile acid transporter 5 | chr4:7210981-7212713 FORWARD LENGTH=407)

HSP 1 Score: 53.9138 bits (128), Expect = 3.265e-8
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 3
Query:   18 RTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWR 170
            RTIS E GMQ++ L + LATK F DPL  VP A+S+V  S+ G  L  IW+
Sbjct:  353 RTISYETGMQSSLLALALATKFFQDPLVGVPPAISTVVMSLMGVSLVTIWK 403          
BLAST of GT619584 vs. TAIR peptide
Match: AT4G22840.1 (| Symbols: | Sodium Bile acid symporter family | chr4:11991636-11993676 REVERSE LENGTH=409)

HSP 1 Score: 51.6026 bits (122), Expect = 1.620e-7
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 3
Query:   18 RTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIW 167
            RT+S E GMQ++ L + LATK F DPL  +P A+S+V  S+ G  L  IW
Sbjct:  352 RTLSYETGMQSSLLALALATKFFQDPLVGIPPAISTVVMSLMGFTLVLIW 401          
The following BLAST results are available for this feature:
BLAST of GT619584 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SZ26_RICCO1.462e-2380.00Sodium-bile acid cotransporter, putative OS=Ricinu... [more]
B9N7S4_POPTR2.494e-2381.54Bile acid:Na+ symporter family protein (Fragment) ... [more]
A5B8X3_VITVI4.254e-2380.00Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9SYM6_ARATH1.238e-2278.46T30F21.11 protein OS=Arabidopsis thaliana GN=T30F2... [more]
Q93YR2_ARATH1.238e-2278.46Putative uncharacterized protein OS=Arabidopsis th... [more]
D7KVC3_ARALY2.111e-2280.00Bile acid:sodium symporter family protein OS=Arabi... [more]
Q7XVB3_ORYSJ2.334e-2179.69OSJNBa0072D21.3 protein OS=Oryza sativa subsp. jap... [more]
Q01LJ7_ORYSA2.334e-2179.69OSIGBa0092E09.1 protein OS=Oryza sativa GN=OSIGBa0... [more]
C5WVA9_SORBI2.334e-2176.56Putative uncharacterized protein Sb01g016820 OS=So... [more]
B9FEU0_ORYSJ2.334e-2179.69Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT619584 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
YOCS_BACSU4.096e-954.55Uncharacterized sodium-dependent transporter yocS ... [more]
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BLAST of GT619584 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G78560.16.549e-2578.46| Symbols: | Sodium Bile acid symporter family | ... [more]
AT2G26900.17.510e-1357.81| Symbols: | Sodium Bile acid symporter family | ... [more]
AT4G12030.13.265e-852.94| Symbols: BAT5, BASS5 | bile acid transporter 5 |... [more]
AT4G12030.23.265e-852.94| Symbols: BAT5, BASS5 | bile acid transporter 5 |... [more]
AT4G22840.11.620e-750.00| Symbols: | Sodium Bile acid symporter family | ... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002657Bile acid:sodium symporterPANTHERPTHR10361SODIUM-BILE ACID COTRANSPORTERcoord: 5..56
score: 6.7

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT619584 ID=GT619584; Name=GT619584; organism=Lens culinaris; type=EST; length=401bp
TAGACGTGTCATCTTCACGAACAATATCCATCGAGGTTGGCATGCAGAAC
GCGGCTCTTGGTGTTGTGCTAGCTACTAAGCACTTTGGAGATCCTCTAAC
AACAGTACCTTGTGCTGTTTCAAGTGTGTGTCACTCTATCTTTGGCAGTA
TCTTGGCAGGAATTTGGAGGTTTTCTTTGCCTTCTGAGATAAAGGACTGA
ATATATCTAGCTTGATGTGCTATTGCATGTAACTAGGAATGTGTTTGTAT
CGATGAAATATTTGATAATATTATATTCTTAACTGTACAAGGATTCCTCC
TTTTTATAGGGGGAATTACAACAATGACTGACTACAATTTAGGAAGGGAA
TCCTAAATTAAGGAAAGAATAAATCATAATACGAAACTACCTAAAGTAGA
C
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0008508bile acid:sodium symporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002657BilAc:Na_symport/Acr3