GT619584
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT619584 vs. TrEMBL
Match: B9SZ26_RICCO (Sodium-bile acid cotransporter, putative OS=Ricinus communis GN=RCOM_0494130 PE=4 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.462e-23 Identity = 52/65 (80.00%), Postives = 61/65 (93.85%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197 DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHS+FGS+LAG+WR SLP++ KD Sbjct: 340 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSVFGSLLAGVWRRSLPTQNKD 404
BLAST of GT619584 vs. TrEMBL
Match: B9N7S4_POPTR (Bile acid:Na+ symporter family protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_274865 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.494e-23 Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197 DV+SSRTISIEVGMQN+ LGVVLATKHFG+PLT VPCAVSSVCHSIFGS+LAGIWR S+P++ D Sbjct: 203 DVASSRTISIEVGMQNSVLGVVLATKHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRRSVPAQNDD 267
BLAST of GT619584 vs. TrEMBL
Match: A5B8X3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023946 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.254e-23 Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197 DVSSSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHS+FGS+LAGIWR S P +++D Sbjct: 113 DVSSSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSVFGSVLAGIWRRSPPVKVQD 177
BLAST of GT619584 vs. TrEMBL
Match: Q9SYM6_ARATH (T30F21.11 protein OS=Arabidopsis thaliana GN=T30F21.11 PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.238e-22 Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197 DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS+LAGIWR S P +++D Sbjct: 120 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQLED 184
BLAST of GT619584 vs. TrEMBL
Match: Q93YR2_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At1g78560 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.238e-22 Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197 DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS+LAGIWR S P +++D Sbjct: 337 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQLED 401
BLAST of GT619584 vs. TrEMBL
Match: D7KVC3_ARALY (Bile acid:sodium symporter family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895757 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.111e-22 Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197 DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS LAGIWR S P +I+D Sbjct: 335 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSALAGIWRRSAPKQIED 399
BLAST of GT619584 vs. TrEMBL
Match: Q7XVB3_ORYSJ (OSJNBa0072D21.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0072D21.3 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21 Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194 D+SSSRTISIEVGMQN+ LGVVLA+KHFG+PLT VPCAVSSVCHS++GS+LAGIWR SLP K Sbjct: 342 DISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWR-SLPPNDK 404
BLAST of GT619584 vs. TrEMBL
Match: Q01LJ7_ORYSA (OSIGBa0092E09.1 protein OS=Oryza sativa GN=OSIGBa0092E09.1 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21 Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194 D+SSSRTISIEVGMQN+ LGVVLA+KHFG+PLT VPCAVSSVCHS++GS+LAGIWR SLP K Sbjct: 342 DISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWR-SLPPNDK 404
BLAST of GT619584 vs. TrEMBL
Match: C5WVA9_SORBI (Putative uncharacterized protein Sb01g016820 OS=Sorghum bicolor GN=Sb01g016820 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21 Identity = 49/64 (76.56%), Postives = 60/64 (93.75%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194 D+SS+RTISIEVGMQN+ LG+VLATKHFG+PLT VPCAVSS+CHS++GSILAGIWR S+P++ K Sbjct: 331 DISSARTISIEVGMQNSVLGLVLATKHFGNPLTAVPCAVSSICHSVYGSILAGIWR-SMPTKDK 393
BLAST of GT619584 vs. TrEMBL
Match: B9FEU0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_14528 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.334e-21 Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIK 194 D+SSSRTISIEVGMQN+ LGVVLA+KHFG+PLT VPCAVSSVCHS++GS+LAGIWR SLP K Sbjct: 286 DISSSRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIWR-SLPPNDK 348
BLAST of GT619584 vs. SwissProt
Match: YOCS_BACSU (Uncharacterized sodium-dependent transporter yocS OS=Bacillus subtilis GN=yocS PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 4.096e-9 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIW 167 D S + I+IEVGMQN+ LG LAT HF PL+ VP A+ SV H++ GS+LA W Sbjct: 250 DYPSQKAIAIEVGMQNSGLGAALATAHF-SPLSAVPSAIFSVWHNLSGSMLATYW 303
BLAST of GT619584 vs. TAIR peptide
Match: AT1G78560.1 (| Symbols: | Sodium Bile acid symporter family | chr1:29546846-29548764 REVERSE LENGTH=401) HSP 1 Score: 109.383 bits (272), Expect = 6.549e-25 Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 3 Query: 3 DVSSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWRFSLPSEIKD 197 DV+SSRTISIEVGMQN+ LGVVLAT+HFG+PLT VPCAVSSVCHSI GS+LAGIWR S P +++D Sbjct: 337 DVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQLED 401
BLAST of GT619584 vs. TAIR peptide
Match: AT2G26900.1 (| Symbols: | Sodium Bile acid symporter family | chr2:11475156-11477870 REVERSE LENGTH=409) HSP 1 Score: 69.3218 bits (168), Expect = 7.510e-13 Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 9 SSSRTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWR-FSLPSEIKD 197 S+SRTISIE GMQ++ALG +LA KHF +PL VP AVS VC ++ GS LA WR +P++ KD Sbjct: 342 STSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSGLAVFWRNLPIPADDKD 405
BLAST of GT619584 vs. TAIR peptide
Match: AT4G12030.1 (| Symbols: BAT5, BASS5 | bile acid transporter 5 | chr4:7211716-7212713 FORWARD LENGTH=273) HSP 1 Score: 53.9138 bits (128), Expect = 3.265e-8 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 18 RTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWR 170 RTIS E GMQ++ L + LATK F DPL VP A+S+V S+ G L IW+ Sbjct: 219 RTISYETGMQSSLLALALATKFFQDPLVGVPPAISTVVMSLMGVSLVTIWK 269
BLAST of GT619584 vs. TAIR peptide
Match: AT4G12030.2 (| Symbols: BAT5, BASS5 | bile acid transporter 5 | chr4:7210981-7212713 FORWARD LENGTH=407) HSP 1 Score: 53.9138 bits (128), Expect = 3.265e-8 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 18 RTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIWR 170 RTIS E GMQ++ L + LATK F DPL VP A+S+V S+ G L IW+ Sbjct: 353 RTISYETGMQSSLLALALATKFFQDPLVGVPPAISTVVMSLMGVSLVTIWK 403
BLAST of GT619584 vs. TAIR peptide
Match: AT4G22840.1 (| Symbols: | Sodium Bile acid symporter family | chr4:11991636-11993676 REVERSE LENGTH=409) HSP 1 Score: 51.6026 bits (122), Expect = 1.620e-7 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 18 RTISIEVGMQNAALGVVLATKHFGDPLTTVPCAVSSVCHSIFGSILAGIW 167 RT+S E GMQ++ L + LATK F DPL +P A+S+V S+ G L IW Sbjct: 352 RTLSYETGMQSSLLALALATKFFQDPLVGIPPAISTVVMSLMGFTLVLIW 401 The following BLAST results are available for this feature:
BLAST of GT619584 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT619584 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT619584 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT619584 ID=GT619584; Name=GT619584; organism=Lens culinaris; type=EST; length=401bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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