GT620197
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620197 vs. TrEMBL
Match: C6T089_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.168e-11 Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDKTS 133 GTIS +D SI DPVSAAEE AFCK+CARFGLGLY+YHED+ S Sbjct: 159 GTISPSDGSIGDPVSAAEEIAFCKSCARFGLGLYLYHEDQMS 200
BLAST of GT620197 vs. TrEMBL
Match: C5WS27_SORBI (Putative uncharacterized protein Sb01g001020 OS=Sorghum bicolor GN=Sb01g001020 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.405e-10 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDKT 130 GT S +DA DPVSAAEE AFCKACARFG GLY+YHED+T Sbjct: 148 GTASLSDARFDDPVSAAEEAAFCKACARFGFGLYLYHEDET 188
BLAST of GT620197 vs. TrEMBL
Match: A2XP50_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14354 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.405e-10 Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDKTS 133 GT S DA DPV+AAEE AFCKACARFG GLY+YHED+TS Sbjct: 151 GTTSLNDARFDDPVAAAEEAAFCKACARFGFGLYLYHEDETS 192
BLAST of GT620197 vs. TrEMBL
Match: Q10AI2_ORYSJ (Os03g0851500 protein OS=Oryza sativa subsp. japonica GN=Os03g0851500 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.088e-10 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDKT 130 GT S DA DPV+AAEE AFCKACARFG GLY+YHED+T Sbjct: 151 GTTSLNDARFDDPVAAAEEAAFCKACARFGFGLYLYHEDET 191
BLAST of GT620197 vs. TrEMBL
Match: B9GYS9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_412974 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.088e-10 Identity = 28/40 (70.00%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDK 127 GT+S++D +I DPV+AAEE AFC+ACARFGLGLY+YHE++ Sbjct: 86 GTVSSSDVAIEDPVAAAEEIAFCRACARFGLGLYLYHEEQ 125
BLAST of GT620197 vs. TrEMBL
Match: A9PGP3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.088e-10 Identity = 28/40 (70.00%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDK 127 GT+S++D +I DPV+AAEE AFC+ACARFGLGLY+YHE++ Sbjct: 182 GTVSSSDVAIEDPVAAAEEIAFCRACARFGLGLYLYHEEQ 221
BLAST of GT620197 vs. TrEMBL
Match: B9RG45_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1439020 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.339e-10 Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHED 124 GT+S +D I DPV+AAEE AFCKACARFGLGLY+YHE+ Sbjct: 182 GTVSPSDGHIVDPVAAAEEIAFCKACARFGLGLYLYHEE 220
BLAST of GT620197 vs. TrEMBL
Match: B7ZZ71_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.339e-10 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDKT 130 GT S +D DPVSAAEE AFCKACARFG GLY+YHED+T Sbjct: 148 GTASLSDERFDDPVSAAEEAAFCKACARFGFGLYLYHEDET 188
BLAST of GT620197 vs. TrEMBL
Match: B6TP06_MAIZE (SnRK1-interacting protein 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.339e-10 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHEDKT 130 GT S +D DPVSAAEE AFCKACARFG GLY+YHED+T Sbjct: 148 GTASLSDERFDDPVSAAEEAAFCKACARFGFGLYLYHEDET 188
BLAST of GT620197 vs. TrEMBL
Match: Q9FIJ4_ARATH (At5g47870 OS=Arabidopsis thaliana GN=At5g47870 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.973e-10 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHE 121 GT++TTD I DPV+AAEE AFC+ACARFGLGLY+YHE Sbjct: 162 GTVTTTDDHIEDPVTAAEEIAFCRACARFGLGLYLYHE 199
BLAST of GT620197 vs. TAIR peptide
Match: AT5G47870.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19384555-19385808 REVERSE LENGTH=199) HSP 1 Score: 67.0106 bits (162), Expect = 4.882e-12 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 8 GTISTTDASITDPVSAAEENAFCKACARFGLGLYMYHE 121 GT++TTD I DPV+AAEE AFC+ACARFGLGLY+YHE Sbjct: 162 GTVTTTDDHIEDPVTAAEEIAFCRACARFGLGLYLYHE 199 The following BLAST results are available for this feature:
BLAST of GT620197 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620197 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620197 ID=GT620197; Name=GT620197; organism=Lens culinaris; type=EST; length=449bpback to top |