GT621910
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT621910 vs. TrEMBL
Match: D7TW41_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019815001 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.050e-21 Identity = 50/66 (75.76%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 RGRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 RGRRFL+SDKLQSLF++ID+GR VKP +YRLVRPYPRRAF ES + L ELGLT+KQEALFLEL+ Sbjct: 673 RGRRFLKSDKLQSLFNFIDVGRAVKPGTYRLVRPYPRRAFSDGESTLSLNELGLTSKQEALFLELI 738
BLAST of GT621910 vs. TrEMBL
Match: B9IC59_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_730970 PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.794e-21 Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 2 Query: 5 GRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 GRRFL+SDKLQ LFD+ID+GR VKP +YR+VRPYPRRAF V + ++ L ELGLTNKQEALFLEL+ Sbjct: 189 GRRFLKSDKLQLLFDFIDVGRAVKPGTYRVVRPYPRRAFSVSDISLSLNELGLTNKQEALFLELI 253
BLAST of GT621910 vs. TrEMBL
Match: A9P8U1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.874e-21 Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 2 Query: 2 RGRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 RGRRFL+SDKL +LFD+IDIGR VKP +YRLVRPYPRRAF E A+ L ELGLT+KQEALFLEL+ Sbjct: 147 RGRRFLKSDKLHALFDFIDIGRVVKPGTYRLVRPYPRRAFSDGEGALTLNELGLTSKQEALFLELI 212
BLAST of GT621910 vs. TrEMBL
Match: D7M082_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489990 PE=4 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.404e-20 Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 RGRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 RGRRFL+SDKLQSLF++IDI R VKP++YRLVRPYPR+AFG ES L +LGLT+KQEALFLEL+ Sbjct: 498 RGRRFLKSDKLQSLFNFIDIARVVKPNTYRLVRPYPRKAFGDGESESTLNDLGLTSKQEALFLELI 563
BLAST of GT621910 vs. TrEMBL
Match: Q94B82_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=T5C23.170 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.673e-19 Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 2 Query: 2 RGRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 RGRRFL+SDKLQ+LF++IDI R VKP++YRLVRPYPR AFG ES L +LGLT+KQEALFLEL+ Sbjct: 325 RGRRFLKSDKLQTLFNFIDIARVVKPNTYRLVRPYPRHAFGDGESESTLNDLGLTSKQEALFLELI 390
BLAST of GT621910 vs. TrEMBL
Match: B9GKN0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1067013 PE=4 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.673e-19 Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 2 Query: 2 RGRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 RGRRFL+SD LQ+ FD+IDIGR VKP +YRLVRPYPRRAF ESA+ L ELGL +KQEALFLE + Sbjct: 521 RGRRFLKSDNLQAFFDFIDIGRVVKPGTYRLVRPYPRRAFSDGESALTLNELGLASKQEALFLESI 586
BLAST of GT621910 vs. TrEMBL
Match: B9GW72_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554317 PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.186e-19 Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 2 Query: 2 RGRRFLRSDKLQSLFDYIDIGRQVKPSSYRL-VRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 RGRRFL+SDKL +LFD+IDIGR VKP +YRL VRPYPRRAF E A+ L ELGLT+KQEALFLEL+ Sbjct: 523 RGRRFLKSDKLHALFDFIDIGRVVKPGTYRLQVRPYPRRAFSDGEGALTLNELGLTSKQEALFLELI 589
BLAST of GT621910 vs. TrEMBL
Match: Q9C5G7_ARATH (Putative uncharacterized protein At4g23040 OS=Arabidopsis thaliana GN=At4g23040 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.869e-19 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 2 Query: 5 GRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 GRRF +SDKLQSLFD+IDI R VKP++YRLVRPYPRRAFG E + L ++GLT+KQEALFLEL+ Sbjct: 461 GRRFFKSDKLQSLFDFIDICRVVKPNTYRLVRPYPRRAFGDGECSSTLNDIGLTSKQEALFLELI 525
BLAST of GT621910 vs. TrEMBL
Match: O82753_ARATH (Putative uncharacterized protein AT4g23040 OS=Arabidopsis thaliana GN=F7H19.230 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.869e-19 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 2 Query: 5 GRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 GRRF +SDKLQSLFD+IDI R VKP++YRLVRPYPRRAFG E + L ++GLT+KQEALFLEL+ Sbjct: 513 GRRFFKSDKLQSLFDFIDICRVVKPNTYRLVRPYPRRAFGDGECSSTLNDIGLTSKQEALFLELI 577
BLAST of GT621910 vs. TrEMBL
Match: D7MDX6_ARALY (UBX domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492561 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.305e-19 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 2 Query: 5 GRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 GRRFL+SDKLQSLFD+IDI R VKP++YRLVRPYPR AFG E + L ++GLT+KQEALFLEL+ Sbjct: 468 GRRFLKSDKLQSLFDFIDICRVVKPNTYRLVRPYPRHAFGDGECSSTLNDVGLTSKQEALFLELI 532
BLAST of GT621910 vs. TAIR peptide
Match: AT4G11740.1 (| Symbols: SAY1 | Ubiquitin-like superfamily protein | chr4:7071955-7075256 FORWARD LENGTH=564) HSP 1 Score: 98.9821 bits (245), Expect = 1.003e-21 Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 2 Query: 2 RGRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 RGRRFL+SDKLQ+LF++IDI R VKP++YRLVRPYPR AFG ES L +LGLT+KQEALFLEL+ Sbjct: 499 RGRRFLKSDKLQTLFNFIDIARVVKPNTYRLVRPYPRHAFGDGESESTLNDLGLTSKQEALFLELI 564
BLAST of GT621910 vs. TAIR peptide
Match: AT4G23040.1 (| Symbols: | Ubiquitin-like superfamily protein | chr4:12075672-12078622 REVERSE LENGTH=525) HSP 1 Score: 97.4413 bits (241), Expect = 2.917e-21 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 2 Query: 5 GRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 GRRF +SDKLQSLFD+IDI R VKP++YRLVRPYPRRAFG E + L ++GLT+KQEALFLEL+ Sbjct: 461 GRRFFKSDKLQSLFDFIDICRVVKPNTYRLVRPYPRRAFGDGECSSTLNDIGLTSKQEALFLELI 525
BLAST of GT621910 vs. TAIR peptide
Match: AT4G00752.1 (| Symbols: | UBX domain-containing protein | chr4:317771-320793 REVERSE LENGTH=469) HSP 1 Score: 94.3597 bits (233), Expect = 2.470e-20 Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 2 Query: 5 GRRFLRSDKLQSLFDYIDIGRQVKPSSYRLVRPYPRRAFGVEESAVKLEELGLTNKQEALFLELV 199 GRRFL+SDKL+ LFD+ID VKP +YR+VRPYPRRAF +++ A+ EEL LTNKQEALFLEL+ Sbjct: 404 GRRFLKSDKLKYLFDFIDAAGLVKPGTYRVVRPYPRRAFSIQDGALTFEELSLTNKQEALFLELL 468 The following BLAST results are available for this feature:
BLAST of GT621910 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT621910 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT621910 ID=GT621910; Name=GT621910; organism=Lens culinaris; type=EST; length=422bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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