GT624632
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624632 vs. TrEMBL
Match: B9IJ68_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1104816 PE=4 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.129e-16 Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQQ 126 WVDGELVILDGK+IK GPVVGFVYWAPEYHFLVFFNRLRLQQ Sbjct: 636 WVDGELVILDGKYIKGGPVVGFVYWAPEYHFLVFFNRLRLQQ 677
BLAST of GT624632 vs. TrEMBL
Match: B9T3E6_RICCO (EXECUTER1 protein, chloroplast, putative OS=Ricinus communis GN=RCOM_0449360 PE=4 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.605e-16 Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123 WVDGELV+LDGK+IK GPVVGFVYWAPEYHFLVFFNRLRLQ Sbjct: 635 WVDGELVVLDGKYIKGGPVVGFVYWAPEYHFLVFFNRLRLQ 675
BLAST of GT624632 vs. TrEMBL
Match: D7MGH6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913050 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.782e-15 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123 WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ Sbjct: 639 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 679
BLAST of GT624632 vs. TrEMBL
Match: C0Z245_ARATH (AT4G33630 protein OS=Arabidopsis thaliana GN=AT4G33630 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.782e-15 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123 WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ Sbjct: 370 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 410
BLAST of GT624632 vs. TrEMBL
Match: D7U656_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_114.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012510001 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.852e-14 Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120 WVDGELVILDGK+IK GP+VGFVYWAP YHFLVFFNRL L Sbjct: 661 WVDGELVILDGKYIKGGPIVGFVYWAPGYHFLVFFNRLML 700
BLAST of GT624632 vs. TrEMBL
Match: Q8W364_ORYSA (Putative uncharacterized protein OSJNBa0029C15.6 OS=Oryza sativa GN=OSJNBa0029C15.6 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.635e-7 Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120 WVDGEL+ILDGK I+ GPV+ F YW +H FF RL+L Sbjct: 686 WVDGELLILDGKFIRDGPVIAFFYWTSNFHLFEFFRRLKL 725
BLAST of GT624632 vs. TrEMBL
Match: Q7XD99_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g34400 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.635e-7 Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120 WVDGEL+ILDGK I+ GPV+ F YW +H FF RL+L Sbjct: 686 WVDGELLILDGKFIRDGPVIAFFYWTSNFHLFEFFRRLKL 725
BLAST of GT624632 vs. TrEMBL
Match: A3C5W0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_31943 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.635e-7 Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120 WVDGEL+ILDGK I+ GPV+ F YW +H FF RL+L Sbjct: 652 WVDGELLILDGKFIRDGPVIAFFYWTSNFHLFEFFRRLKL 691
BLAST of GT624632 vs. SwissProt
Match: EXEC1_ARATH (Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana GN=EX1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123 WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ Sbjct: 643 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 683
BLAST of GT624632 vs. TAIR peptide
Match: AT4G33630.2 (| Symbols: EX1 | Protein of unknown function (DUF3506) | chr4:16155560-16159094 FORWARD LENGTH=684) HSP 1 Score: 85.5001 bits (210), Expect = 2.145e-17 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123 WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ Sbjct: 643 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 683
BLAST of GT624632 vs. TAIR peptide
Match: AT4G33630.1 (| Symbols: EX1 | Protein of unknown function (DUF3506) | chr4:16155560-16159094 FORWARD LENGTH=684) HSP 1 Score: 85.5001 bits (210), Expect = 2.145e-17 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123 WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ Sbjct: 643 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 683 The following BLAST results are available for this feature:
BLAST of GT624632 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 8
BLAST of GT624632 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT624632 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624632 ID=GT624632; Name=GT624632; organism=Lens culinaris; type=EST; length=570bpback to top |