GT624632

EST Overview
NameGT624632
Unique NameGT624632
TypeEST
OrganismLens culinaris (lentil)
Sequence length570
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT624632 vs. TrEMBL
Match: B9IJ68_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1104816 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.129e-16
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQQ 126
            WVDGELVILDGK+IK GPVVGFVYWAPEYHFLVFFNRLRLQQ
Sbjct:  636 WVDGELVILDGKYIKGGPVVGFVYWAPEYHFLVFFNRLRLQQ 677          
BLAST of GT624632 vs. TrEMBL
Match: B9T3E6_RICCO (EXECUTER1 protein, chloroplast, putative OS=Ricinus communis GN=RCOM_0449360 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.605e-16
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123
            WVDGELV+LDGK+IK GPVVGFVYWAPEYHFLVFFNRLRLQ
Sbjct:  635 WVDGELVVLDGKYIKGGPVVGFVYWAPEYHFLVFFNRLRLQ 675          
BLAST of GT624632 vs. TrEMBL
Match: D7MGH6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913050 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.782e-15
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123
            WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ
Sbjct:  639 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 679          
BLAST of GT624632 vs. TrEMBL
Match: C0Z245_ARATH (AT4G33630 protein OS=Arabidopsis thaliana GN=AT4G33630 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.782e-15
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123
            WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ
Sbjct:  370 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 410          
BLAST of GT624632 vs. TrEMBL
Match: D7U656_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_114.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012510001 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.852e-14
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120
            WVDGELVILDGK+IK GP+VGFVYWAP YHFLVFFNRL L
Sbjct:  661 WVDGELVILDGKYIKGGPIVGFVYWAPGYHFLVFFNRLML 700          
BLAST of GT624632 vs. TrEMBL
Match: Q8W364_ORYSA (Putative uncharacterized protein OSJNBa0029C15.6 OS=Oryza sativa GN=OSJNBa0029C15.6 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.635e-7
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120
            WVDGEL+ILDGK I+ GPV+ F YW   +H   FF RL+L
Sbjct:  686 WVDGELLILDGKFIRDGPVIAFFYWTSNFHLFEFFRRLKL 725          
BLAST of GT624632 vs. TrEMBL
Match: Q7XD99_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g34400 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.635e-7
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120
            WVDGEL+ILDGK I+ GPV+ F YW   +H   FF RL+L
Sbjct:  686 WVDGELLILDGKFIRDGPVIAFFYWTSNFHLFEFFRRLKL 725          
BLAST of GT624632 vs. TrEMBL
Match: A3C5W0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_31943 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.635e-7
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRL 120
            WVDGEL+ILDGK I+ GPV+ F YW   +H   FF RL+L
Sbjct:  652 WVDGELLILDGKFIRDGPVIAFFYWTSNFHLFEFFRRLKL 691          
BLAST of GT624632 vs. SwissProt
Match: EXEC1_ARATH (Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana GN=EX1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123
            WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ
Sbjct:  643 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 683          
BLAST of GT624632 vs. TAIR peptide
Match: AT4G33630.2 (| Symbols: EX1 | Protein of unknown function (DUF3506) | chr4:16155560-16159094 FORWARD LENGTH=684)

HSP 1 Score: 85.5001 bits (210), Expect = 2.145e-17
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123
            WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ
Sbjct:  643 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 683          
BLAST of GT624632 vs. TAIR peptide
Match: AT4G33630.1 (| Symbols: EX1 | Protein of unknown function (DUF3506) | chr4:16155560-16159094 FORWARD LENGTH=684)

HSP 1 Score: 85.5001 bits (210), Expect = 2.145e-17
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 1
Query:    1 WVDGELVILDGKHIKAGPVVGFVYWAPEYHFLVFFNRLRLQ 123
            WVDGELVILDGK++K GPVVGFVYWAPEYHF++FFNRLRLQ
Sbjct:  643 WVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQ 683          
The following BLAST results are available for this feature:
BLAST of GT624632 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9IJ68_POPTR1.129e-1695.24Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T3E6_RICCO5.605e-1692.68EXECUTER1 protein, chloroplast, putative OS=Ricinu... [more]
D7MGH6_ARALY2.782e-1587.80Putative uncharacterized protein OS=Arabidopsis ly... [more]
C0Z245_ARATH2.782e-1587.80AT4G33630 protein OS=Arabidopsis thaliana GN=AT4G3... [more]
D7U656_VITVI6.852e-1487.50Whole genome shotgun sequence of line PN40024, sca... [more]
Q8W364_ORYSA1.635e-760.00Putative uncharacterized protein OSJNBa0029C15.6 O... [more]
Q7XD99_ORYSJ1.635e-760.00Expressed protein OS=Oryza sativa subsp. japonica ... [more]
A3C5W0_ORYSJ1.635e-760.00Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT624632 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
EXEC1_ARATH2.015e-1687.80Protein EXECUTER 1, chloroplastic OS=Arabidopsis t... [more]
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BLAST of GT624632 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G33630.22.145e-1787.80| Symbols: EX1 | Protein of unknown function (DUF3... [more]
AT4G33630.12.145e-1787.80| Symbols: EX1 | Protein of unknown function (DUF3... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624632 ID=GT624632; Name=GT624632; organism=Lens culinaris; type=EST; length=570bp
TGGGTTGATGGCGAACTTGTAATTCTTGATGGAAAGCACATAAAAGCAGG
GCCTGTTGTTGGATTTGTGTATTGGGCTCCGGAGTATCATTTTTTGGTCT
TCTTTAACCGGCTTAGGCTTCAGCAGTAGGATTTCGTTGTTCATACTATC
AGAAACTTTGTAAATTCTTTCTTCAGACTTTAACGTGTCAAGGAATGCTA
AAATTGTGCTTCAGTGGAAGATATCATCCATCACTGTAGGATTTCCCGTT
TAAGGATGAATGAAATAAGTTCATTACCAGTGGCATTATTTATCTTCCCA
CTTTGGACTGTACTCAGGTCTCATTCAATCTATATACAGTCCCAAAAGGG
TCTTGCCAAATTTTTTTGAATAGTGAATTGCAGGACATGAGGAAACAGTA
CTGTTGGGTCTATCGTCAATTCTTGCTAATAGCCTTGTATTTCTCTATTT
CTAAATCTGTAATTTGTAACTATTTAGCTGAGCTGTAGGTACTCAAGTCT
ATATATAAAGAGATCTCTTGTATTCTTTCAAATCAATGAATACACAGTAT
GAAATTCTGATTGTGCATAA
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