GT627776

EST Overview
NameGT627776
Unique NameGT627776
TypeEST
OrganismLens culinaris (lentil)
Sequence length313
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
InterProScan analysis for Lens culinaris unigene v12011-01-06
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016018Salmonella type III secretion SopE effector protein, N-terminalPFAMPF05364SecIII_SopE_Ncoord: 11..52
score: 3.6

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627776 ID=GT627776; Name=GT627776; organism=Lens culinaris; type=EST; length=313bp
GATGCTGTGCCAAGGAGTTATCAGAATGGTGGAAAAGCCCCTCGTCAACA
AGCACCGGTGAAAGTTCAATAAAGTGATTCTTTTTGTTGGTAATTGAGCG
CGCGGCTGCGGGATTTTTAGTAGATAGAGCATCTAGGGATTTTGGTTTGC
ATTTGAACTAGAGTCTTTACATTTTGGTCAGAGTTCTTTGGTTAAATTAA
GTGTTTCTACTCTTCTTTTTCTTGATCTCTTCCAATTTTGTTACTTATTT
ACTGTATCTAATTTTCTAGTATGATTGTTTTGGGATTAGTCAGTGATATA
CCATTTTTATTTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR016018Salmonella type III secretion SopE effector protein, N-terminal