GT626301
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT626301 vs. TrEMBL
Match: B7FM90_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.673e-32 Identity = 75/106 (70.75%), Postives = 80/106 (75.47%), Query Frame = 3 Query: 42 VVGSSVIGSKSRNNNKGRTVKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXXTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 VVGSSVIG+KSR+ KG VKFIT LNSYNGLKAQ STV SLGVP+C++QAFA VM TCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI Sbjct: 14 VVGSSVIGTKSRSTKKGNNVKFITGLNSYNGLKAQNSTVTSLGVPMCTEQAFAKVMSSLKYPSNGGRRGGAGSSTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 119
BLAST of GT626301 vs. TrEMBL
Match: C6T146_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.569e-18 Identity = 58/104 (55.77%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 51 SSVIGSKSRNNNKGRTVKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXX-TCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 SSV +K R N V FI LNS+ GLKAQ S V SLG+PVC++Q FA V+ TCNAAGEIFQIAAIMNGL LVGVA+GFVLLR+ Sbjct: 18 SSVASTKRRERN----VHFIRGLNSFGGLKAQNS-VTSLGLPVCTEQCFAKVVSSLKYQSSSKGRGGGAASSTCNAAGEIFQIAAIMNGLVLVGVAIGFVLLRV 116
BLAST of GT626301 vs. TrEMBL
Match: O48717_ARATH (At2g26500 OS=Arabidopsis thaliana GN=At2g26500 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.661e-18 Identity = 57/104 (54.81%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 54 SVIGSKSRNNNKGRTVK--FITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXXTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 S I SKS K +K +IT LNSY GLKAQ + V S+G P+C++Q FANV+ TCNA GEIF+IAAIMN LTLVGVAVGFVLLRI Sbjct: 15 SGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQCFANVVMSLKGRRGNGGALST---TCNAVGEIFKIAAIMNALTLVGVAVGFVLLRI 115
BLAST of GT626301 vs. TrEMBL
Match: D7LDJ9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901414 PE=4 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.661e-18 Identity = 57/104 (54.81%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 54 SVIGSKSRNNNKGRTVK--FITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXXTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 S I SKS K +K +IT LNSY GLKAQ + V S+G P+C++Q FANV+ TCNA GEIF+IAAIMN LTLVGVAVGFVLLRI Sbjct: 80 SGIVSKSGQTQKKTEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQCFANVVVSLKGRRGNGGALST---TCNAVGEIFKIAAIMNALTLVGVAVGFVLLRI 180
BLAST of GT626301 vs. TrEMBL
Match: Q9SZY6_ARATH (Cytochrome b6f complex subunit OS=Arabidopsis thaliana GN=petM PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.038e-17 Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 3 Query: 99 VKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXXTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 V +IT LNSY GLKAQ + V S+G P+C++Q FANV+ TCNA GEIF+IAAIMN LTLVGVAVGFVLLRI Sbjct: 3 VSYITGLNSYGGLKAQNNKVVSMGSPLCTEQCFANVVMSLKGRRGNGGALST---TCNAVGEIFKIAAIMNALTLVGVAVGFVLLRI 86
BLAST of GT626301 vs. TrEMBL
Match: A5AN62_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027615 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.958e-16 Identity = 56/105 (53.33%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 51 SSVIGSKSRNNNKGRT-VKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXX-TCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 ++ I R + + +T V FI LNS++GLKA S VASLG+PVC++Q+FA ++X X TCNA GEIF+IAAIMNGL LVGVAVGFVLLRI Sbjct: 15 AAAIAGLGRTSQRRKTNVHFIGGLNSFDGLKAYNS-VASLGLPVCTEQSFAKIVXSLKSXSQGKGRGGGALSSTCNAVGEIFRIAAIMNGLVLVGVAVGFVLLRI 118
BLAST of GT626301 vs. TrEMBL
Match: C6SYI4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.340e-16 Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 3 Query: 42 VVGSSVIGSKSRNNNKGRTVKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANV---MXXXXXXXXXXXXXXXXXXTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 V S +GS+ R V F LNS+ GLKAQ + V LG+PVC++Q FA V + TCNAAGEIFQIAAIMNGL LVGVA+GFVLLR+ Sbjct: 15 VAASPSVGSRRSGK---RNVNFTRGLNSFGGLKAQNN-VTLLGLPVCTEQCFAKVVSSLKYPSSSSRKGRGGGAAFSTCNAAGEIFQIAAIMNGLVLVGVAIGFVLLRV 119
BLAST of GT626301 vs. TrEMBL
Match: B9NH21_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_273213 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.964e-14 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 3 Query: 99 VKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXX-TCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 V +IT L+S+ GLKA + V+SLG+PVC++Q+FA V+ TC+ GEIF+IAAIMNGL LVGVAVGFVLLR+ Sbjct: 3 VNYITGLDSFGGLKAHNN-VSSLGLPVCTEQSFAKVVSSLRAPSKGKGRSGGALSSTCSDVGEIFRIAAIMNGLVLVGVAVGFVLLRV 89
BLAST of GT626301 vs. TrEMBL
Match: Q9M5M4_EUPES (Putative uncharacterized protein OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.188e-13 Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 42 VVGSSVIGSKSRNNNKGRTVKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXX--TCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 + +SV+ ++ K + +I LNSY GLKA +TVASLG+PV ++Q FANV+ C+ GEI QIAA +NGLTL+GVAVGFVLLRI Sbjct: 13 ISAASVVTIGHKSQKKESKIVYIRGLNSYGGLKAH-NTVASLGMPVSTEQGFANVISSLKTSSSNGKGKSGGALGSKCSKIGEIVQIAATLNGLTLLGVAVGFVLLRI 119
BLAST of GT626301 vs. TrEMBL
Match: A9PFI7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827935 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.188e-13 Identity = 51/107 (47.66%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 42 VVGSSVIGSKSRNNNKGRTVKFITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXX-TCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 +V S+V K + N V +IT LNS+ GLKA S V+SLG+ V S+Q+FA ++ TC+ GEIF+IAA+MNGL LVGVAVGFVLLRI Sbjct: 13 LVASAVSSPKRKQTN----VNYITGLNSFGGLKAHNS-VSSLGLSVGSEQSFAKIVSSLKAPSKGKGGSGGALSSTCSNVGEIFRIAAVMNGLVLVGVAVGFVLLRI 114
BLAST of GT626301 vs. SwissProt
Match: PETM_SPIOL (Cytochrome b6-f complex subunit 7 (Fragment) OS=Spinacia oleracea GN=petM PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 5.039e-7 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 270 NAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 NAA EIF+IAA+MNGLTLVGVA+GFVLLRI Sbjct: 1 NAAAEIFRIAAVMNGLTLVGVAIGFVLLRI 30
BLAST of GT626301 vs. TAIR peptide
Match: AT2G26500.1 (| Symbols: | cytochrome b6f complex subunit (petM), putative | chr2:11270370-11270747 FORWARD LENGTH=125) HSP 1 Score: 94.7449 bits (234), Expect = 3.574e-20 Identity = 57/104 (54.81%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 54 SVIGSKSRNNNKGRTVK--FITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXXTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 S I SKS K +K +IT LNSY GLKAQ + V S+G P+C++Q FANV+ TCNA GEIF+IAAIMN LTLVGVAVGFVLLRI Sbjct: 15 SGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQCFANVVMSLKGRRGNGGALST---TCNAVGEIFKIAAIMNALTLVGVAVGFVLLRI 115
BLAST of GT626301 vs. TAIR peptide
Match: AT2G26500.2 (| Symbols: | cytochrome b6f complex subunit (petM), putative | chr2:11270370-11270747 FORWARD LENGTH=125) HSP 1 Score: 94.7449 bits (234), Expect = 3.574e-20 Identity = 57/104 (54.81%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 54 SVIGSKSRNNNKGRTVK--FITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVMXXXXXXXXXXXXXXXXXXTCNAAGEIFQIAAIMNGLTLVGVAVGFVLLRI 359 S I SKS K +K +IT LNSY GLKAQ + V S+G P+C++Q FANV+ TCNA GEIF+IAAIMN LTLVGVAVGFVLLRI Sbjct: 15 SGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQCFANVVMSLKGRRGNGGALST---TCNAVGEIFKIAAIMNALTLVGVAVGFVLLRI 115
BLAST of GT626301 vs. TAIR peptide
Match: AT2G26500.3 (| Symbols: | cytochrome b6f complex subunit (petM), putative | chr2:11270370-11270747 FORWARD LENGTH=93) HSP 1 Score: 51.6026 bits (122), Expect = 3.469e-7 Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 3 Query: 54 SVIGSKSRNNNKGRTVK--FITRLNSYNGLKAQKSTVASLGVPVCSQQAFANVM 209 S I SKS K +K +IT LNSY GLKAQ + V S+G P+C++Q FANV+ Sbjct: 15 SGIVSKSGQTQKKSEMKVSYITGLNSYGGLKAQNNKVVSMGSPLCTEQCFANVV 68 The following BLAST results are available for this feature:
BLAST of GT626301 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT626301 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT626301 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT626301 ID=GT626301; Name=GT626301; organism=Lens culinaris; type=EST; length=575bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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