GT626785

EST Overview
NameGT626785
Unique NameGT626785
TypeEST
OrganismLens culinaris (lentil)
Sequence length364
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT626785 vs. TrEMBL
Match: C7E2U1_9ROSI (Biotin carboxyl carrier protein subunit OS=Jatropha curcas PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.311e-8
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQ+GTIAEILVEDGKPVSV +PLF IAP
Sbjct:  237 MNEIEADQAGTIAEILVEDGKPVSVDMPLFVIAP 270          
BLAST of GT626785 vs. TrEMBL
Match: C6TK92_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.504e-8
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQSGTIAE+L EDGKPVSV +PLF I P
Sbjct:  247 MNEIEADQSGTIAEVLAEDGKPVSVDMPLFVIVP 280          
BLAST of GT626785 vs. TrEMBL
Match: D7SXK0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011511001 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.472e-7
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQSGTIAEIL EDGKPVS+  PL  IAP
Sbjct:  237 MNEIEADQSGTIAEILAEDGKPVSIDTPLLVIAP 270          
BLAST of GT626785 vs. TrEMBL
Match: Q9GE06_SOYBN (Biotin carboxyl carrier protein subunit OS=Glycine max GN=accB-2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.216e-7
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQSGT+AE++ EDGKPVSV  PLF I P
Sbjct:  251 MNEIEADQSGTVAEVVAEDGKPVSVDTPLFVIVP 284          
BLAST of GT626785 vs. TrEMBL
Match: Q9FQ74_SOYBN (Biotin carboxyl carrier protein subunit OS=Glycine max GN=accB-2 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.216e-7
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQSGT+AE++ EDGKPVSV  PLF I P
Sbjct:  251 MNEIEADQSGTVAEVVAEDGKPVSVDTPLFVIVP 284          
BLAST of GT626785 vs. TrEMBL
Match: B9SJD0_RICCO (Biotin carboxyl carrier protein subunit of of Het-ACCase (BCCP2) OS=Ricinus communis GN=RCOM_0525570 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.216e-7
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQSGTI E+L EDGKPVSV  PLF I P
Sbjct:  227 MNEIEADQSGTITEVLAEDGKPVSVDTPLFVIVP 260          
BLAST of GT626785 vs. TrEMBL
Match: A9P0L3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.216e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEAD+SGTI EILVEDGKPV+V +PLF I P
Sbjct:  276 MNEIEADRSGTIVEILVEDGKPVAVDMPLFVIKP 309          
BLAST of GT626785 vs. TrEMBL
Match: C0LLW0_SUASA (Acetyl-coenzyme A carboxylase (Fragment) OS=Suaeda salsa PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.506e-7
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQSGTI EIL +DGKPVSV +PLF I P
Sbjct:  224 MNEIEADQSGTIVEILAKDGKPVSVDMPLFVIEP 257          
BLAST of GT626785 vs. TrEMBL
Match: D7SXK1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011513001 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.392e-7
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQSGTI EIL EDGKPVS+  PL  IAP
Sbjct:   38 MNEIEADQSGTITEILAEDGKPVSIDRPLLVIAP 71          
BLAST of GT626785 vs. TrEMBL
Match: B9IQ25_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_665593 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.392e-7
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEADQ+GTI EIL EDGKPVSV  PLF I P
Sbjct:  251 MNEIEADQTGTIVEILAEDGKPVSVDTPLFVIEP 284          
BLAST of GT626785 vs. SwissProt
Match: BCCP2_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BCCP2 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.022e-7
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEA++SGTI E+L EDGKPVSV  PLF IAP
Sbjct:  222 MNEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255          
BLAST of GT626785 vs. TAIR peptide
Match: AT5G15530.1 (| Symbols: BCCP2, CAC1-B | biotin carboxyl carrier protein 2 | chr5:5038955-5040437 FORWARD LENGTH=255)

HSP 1 Score: 55.4546 bits (132), Expect = 8.726e-9
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIEA++SGTI E+L EDGKPVSV  PLF IAP
Sbjct:  222 MNEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255          
BLAST of GT626785 vs. TAIR peptide
Match: AT5G16390.1 (| Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic acetylcoenzyme A carboxylase 1 | chr5:5361098-5363020 REVERSE LENGTH=280)

HSP 1 Score: 49.2914 bits (116), Expect = 6.253e-7
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = -2
Query:  262 MNEIEADQSGTIAEILVEDGKPVSVGLPLFAIAP 363
            MNEIE+D +GT+ +I+ EDGKPVS+  PLF + P
Sbjct:  247 MNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280          
The following BLAST results are available for this feature:
BLAST of GT626785 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C7E2U1_9ROSI1.311e-888.24Biotin carboxyl carrier protein subunit OS=Jatroph... [more]
C6TK92_SOYBN6.504e-882.35Putative uncharacterized protein OS=Glycine max PE... [more]
D7SXK0_VITVI2.472e-782.35Whole genome shotgun sequence of line PN40024, sca... [more]
Q9GE06_SOYBN4.216e-776.47Biotin carboxyl carrier protein subunit OS=Glycine... [more]
Q9FQ74_SOYBN4.216e-776.47Biotin carboxyl carrier protein subunit OS=Glycine... [more]
B9SJD0_RICCO4.216e-779.41Biotin carboxyl carrier protein subunit of of Het-... [more]
A9P0L3_PICSI4.216e-779.41Putative uncharacterized protein OS=Picea sitchens... [more]
C0LLW0_SUASA5.506e-779.41Acetyl-coenzyme A carboxylase (Fragment) OS=Suaeda... [more]
D7SXK1_VITVI9.392e-779.41Whole genome shotgun sequence of line PN40024, sca... [more]
B9IQ25_POPTR9.392e-779.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GT626785 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
BCCP2_ARATH1.022e-776.47Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
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BLAST of GT626785 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G15530.18.726e-976.47| Symbols: BCCP2, CAC1-B | biotin carboxyl carrier... [more]
AT5G16390.16.253e-758.82| Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplasti... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..23
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT626785 ID=GT626785; Name=GT626785; organism=Lens culinaris; type=EST; length=364bp
AAATCTAATGCATAAGACATCGACAAATATTGTAAAACTCTTTTACAAGA
AAACATTATTAAAACTGTTCAGATCTACAAACTCAAACACTCCTGAGATG
CCATGGCATTTATGTCTTGAAATATCTCTATTTTTAAATAAATATAATGA
TTTTCTAAACTCGAACAAATATTATTGCGCAATAAATATATCCGAATAAT
AAAAATTCCGCGCCATTATCAAGAACTAAAGATGTGAGGTTCCTTCTTCT
GGTACACATCATGGCGCAATTGCAAAAAGAGGCAGGCCTACACTGACTGG
TTTCCCGTCTTCTACCAGAATCTCAGCTATTGTTCCTGATTGATCAGCTT
CAATTTCGTTCATC
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