GT627045
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT627045 vs. TrEMBL
Match: Q9FE62_ARATH (AT5g08290 OS=Arabidopsis thaliana GN=F8L15_20 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.643e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: Q8LF46_ARATH (Putative thioredoxin-like U5 small ribonucleoprotein particle protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.643e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: D7M1A3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908777 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.643e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: B7FMH0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.643e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: B7FF76_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.643e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: A9NPK8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.643e-11 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: Q8W376_ORYSA (Putative thioredoxin-like U5 small ribonucleoprotein particle protein OS=Oryza sativa GN=OSJNBa0029C15.2 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.146e-11 Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: Q7XJB7_SOYBN (Putative DIM-like protein (Fragment) OS=Glycine max GN=DIM PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.146e-11 Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 104 KQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 137
BLAST of GT627045 vs. TrEMBL
Match: Q7X873_ORYSJ (Os07g0202450 protein OS=Oryza sativa subsp. japonica GN=Os07g0202450 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.146e-11 Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of GT627045 vs. TrEMBL
Match: Q1EP80_MUSAC (Spliceosomal U5 snRNP-specific 15 kDa protein, putative OS=Musa acuminata GN=MA4_54B05.16 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.146e-11 Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDI+ETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 158 KQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY 191
BLAST of GT627045 vs. SwissProt
Match: TXN4A_MOUSE (Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.501e-11 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQE +DIIETVYRGARKGRGLV++PKDYSTKYRY Sbjct: 109 KQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of GT627045 vs. SwissProt
Match: TXN4A_HUMAN (Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.501e-11 Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQE +DIIETVYRGARKGRGLV++PKDYSTKYRY Sbjct: 109 KQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of GT627045 vs. SwissProt
Match: DIMI_SCHPO (Mitosis protein dim1 OS=Schizosaccharomyces pombe GN=dim1 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 6.306e-10 Identity = 27/34 (79.41%), Postives = 33/34 (97.06%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQE IDIIET++RGARKG+GLVI+PKDYST++RY Sbjct: 109 KQEMIDIIETIFRGARKGKGLVISPKDYSTRHRY 142
BLAST of GT627045 vs. SwissProt
Match: TXN4A_DICDI (Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum GN=txnl4a PE=3 SV=4) HSP 1 Score: 53.5286 bits (127), Expect = 3.826e-7 Identity = 22/34 (64.71%), Postives = 31/34 (91.18%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQ+ IDIIETVY+GARKG+GLV +P+D+S +Y++ Sbjct: 100 KQDMIDIIETVYKGARKGKGLVNSPRDFSPQYKF 133
BLAST of GT627045 vs. TAIR peptide
Match: AT5G08290.1 (| Symbols: YLS8 | mRNA splicing factor, thioredoxin-like U5 snRNP | chr5:2666043-2666936 FORWARD LENGTH=142) HSP 1 Score: 72.4034 bits (176), Expect = 6.294e-14 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 2 Query: 2 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 103 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY Sbjct: 109 KQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY 142 The following BLAST results are available for this feature:
BLAST of GT627045 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT627045 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 4
BLAST of GT627045 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT627045 ID=GT627045; Name=GT627045; organism=Lens culinaris; type=EST; length=319bpback to top |