GT627399

EST Overview


Name	GT627399
Unique Name	GT627399
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	454

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q9SQ75_GOSHI (Alpha-tubulin (Fragment) OS=Gossypium hirsutum GN=TubA1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:   40 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q9SQ73_GOSHI (Alpha-tubulin (Fragment) OS=Gossypium hirsutum GN=TubA3 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:   40 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q9SQ72_GOSHI (Alpha-tubulin (Fragment) OS=Gossypium hirsutum GN=TubA4 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:   35 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 109

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q944I2_ARATH (AT4g14960/dl3520c OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q93XB1_ROSHC (Alpha tubulin subunit OS=Rosa hybrid cultivar PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q8VXD1_TOBAC (Alpha-tubulin OS=Nicotiana tabacum GN=tubA1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q8VXD0_TOBAC (Alpha-tubulin OS=Nicotiana tabacum GN=tubA2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q8VXC9_TOBAC (Alpha-tubulin OS=Nicotiana tabacum GN=tubA3 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q84XV0_POPTM (Alpha tubulin OS=Populus tremuloides PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TrEMBL
Match: Q84TK6_POPTM (Alpha-tubulin 1 OS=Populus tremuloides PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.611e-36
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.412e-37
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.412e-37
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.412e-37
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.412e-37
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA1_GOSHI (Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.412e-37
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA1_ANEPH (Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.412e-37
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.456e-37
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAF+HWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFIHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.927e-37
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMY KRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.927e-37
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNST++AEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. SwissProt
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.927e-37
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNST++AEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT4G14960.2 (| Symbols: TUA6 | Tubulin/FtsZ family protein | chr4:8548769-8550319 REVERSE LENGTH=450)

HSP 1 Score: 153.68 bits (387), Expect = 4.103e-38
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT1G50010.1 (| Symbols: TUA2 | tubulin alpha-2 chain | chr1:18517737-18519729 FORWARD LENGTH=450)

HSP 1 Score: 153.68 bits (387), Expect = 4.103e-38
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT1G04820.1 (| Symbols: TUA4, TOR2 | tubulin alpha-4 chain | chr1:1356421-1358266 REVERSE LENGTH=450)

HSP 1 Score: 153.68 bits (387), Expect = 4.103e-38
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISNSTSVAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT5G19780.1 (| Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-6688926 FORWARD LENGTH=450)

HSP 1 Score: 151.369 bits (381), Expect = 2.036e-37
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISN+T+VAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT5G19770.1 (| Symbols: TUA3 | tubulin alpha-3 | chr5:6682761-6684474 REVERSE LENGTH=450)

HSP 1 Score: 151.369 bits (381), Expect = 2.036e-37
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPPTVVPGGDLAKVQRAVCMISN+T+VAEVF RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT1G64740.1 (| Symbols: TUA1 | alpha-1 tubulin | chr1:24050114-24052296 FORWARD LENGTH=450)

HSP 1 Score: 148.673 bits (374), Expect = 1.320e-36
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 1

Query:    1 QPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            QPP+VVPGGDLAKVQRAVCMISN+T+VAEVF RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct:  358 QPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT1G75780.1 (| Symbols: TUB1 | tubulin beta-1 chain | chr1:28451378-28453602 REVERSE LENGTH=447)

HSP 1 Score: 64.6994 bits (156), Expect = 2.507e-11
Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = 1

Query:   40 VQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            ++ A   + NSTS+ E+F R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y
Sbjct:  362 IKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 423

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT5G23860.2 (| Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449)

HSP 1 Score: 64.3142 bits (155), Expect = 3.274e-11
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1

Query:   40 VQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            ++ A   I NSTS+ E+F R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y
Sbjct:  361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT5G23860.1 (| Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449)

HSP 1 Score: 64.3142 bits (155), Expect = 3.274e-11
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1

Query:   40 VQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            ++ A   I NSTS+ E+F R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y
Sbjct:  361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

[Close]

BLAST of GT627399 vs. TAIR peptide
Match: AT5G62700.1 (| Symbols: TUB3 | tubulin beta chain 3 | chr5:25184501-25186426 FORWARD LENGTH=450)

HSP 1 Score: 64.3142 bits (155), Expect = 3.274e-11
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1

Query:   40 VQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 225
            ++ A   I NSTS+ E+F R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y
Sbjct:  361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422

The following BLAST results are available for this feature:

BLAST of GT627399 vs. TrEMBL
BLAST of GT627399 vs. SwissProt
BLAST of GT627399 vs. TAIR peptide

BLAST of GT627399 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9SQ75_GOSHI	5.611e-36	98.67	Alpha-tubulin (Fragment) OS=Gossypium hirsutum GN=...	[more]
Q9SQ73_GOSHI	5.611e-36	98.67	Alpha-tubulin (Fragment) OS=Gossypium hirsutum GN=...	[more]
Q9SQ72_GOSHI	5.611e-36	98.67	Alpha-tubulin (Fragment) OS=Gossypium hirsutum GN=...	[more]
Q944I2_ARATH	5.611e-36	98.67	AT4g14960/dl3520c OS=Arabidopsis thaliana PE=2 SV=...	[more]
Q93XB1_ROSHC	5.611e-36	98.67	Alpha tubulin subunit OS=Rosa hybrid cultivar PE=2...	[more]
Q8VXD1_TOBAC	5.611e-36	98.67	Alpha-tubulin OS=Nicotiana tabacum GN=tubA1 PE=2 S...	[more]
Q8VXD0_TOBAC	5.611e-36	98.67	Alpha-tubulin OS=Nicotiana tabacum GN=tubA2 PE=2 S...	[more]
Q8VXC9_TOBAC	5.611e-36	98.67	Alpha-tubulin OS=Nicotiana tabacum GN=tubA3 PE=2 S...	[more]
Q84XV0_POPTM	5.611e-36	98.67	Alpha tubulin OS=Populus tremuloides PE=2 SV=1	[more]
Q84TK6_POPTM	5.611e-36	98.67	Alpha-tubulin 1 OS=Populus tremuloides PE=2 SV=1	[more]

BLAST of GT627399 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
TBA_PRUDU	3.412e-37	98.67	Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 ...	[more]
TBA6_ARATH	3.412e-37	98.67	Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=T...	[more]
TBA2_ARATH	3.412e-37	98.67	Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thali...	[more]
TBA1_PEA	3.412e-37	98.67	Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE...	[more]
TBA1_GOSHI	3.412e-37	98.67	Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA1_ANEPH	3.412e-37	98.67	Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUB...	[more]
TBA2_GOSHI	4.456e-37	97.33	Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA4_GOSHI	9.927e-37	97.33	Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA1_NAEGR	9.927e-37	96.00	Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=...	[more]
TBA13_NAEGR	9.927e-37	96.00	Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUB...	[more]

BLAST of GT627399 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G14960.2	4.103e-38	98.67	\| Symbols: TUA6 \| Tubulin/FtsZ family protein \| ch...	[more]
AT1G50010.1	4.103e-38	98.67	\| Symbols: TUA2 \| tubulin alpha-2 chain \| chr1:185...	[more]
AT1G04820.1	4.103e-38	98.67	\| Symbols: TUA4, TOR2 \| tubulin alpha-4 chain \| ch...	[more]
AT5G19780.1	2.036e-37	96.00	\| Symbols: TUA5 \| tubulin alpha-5 \| chr5:6687212-6...	[more]
AT5G19770.1	2.036e-37	96.00	\| Symbols: TUA3 \| tubulin alpha-3 \| chr5:6682761-6...	[more]
AT1G64740.1	1.320e-36	93.33	\| Symbols: TUA1 \| alpha-1 tubulin \| chr1:24050114-...	[more]
AT1G75780.1	2.507e-11	41.94	\| Symbols: TUB1 \| tubulin beta-1 chain \| chr1:2845...	[more]
AT5G23860.2	3.274e-11	43.55	\| Symbols: TUB8 \| tubulin beta 8 \| chr5:8042962-80...	[more]
AT5G23860.1	3.274e-11	43.55	\| Symbols: TUB8 \| tubulin beta 8 \| chr5:8042962-80...	[more]
AT5G62700.1	3.274e-11	43.55	\| Symbols: TUB3 \| tubulin beta chain 3 \| chr5:2518...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..93 score: 1.6
IPR002452	Alpha tubulin	PRINTS	PR01162	ALPHATUBULIN	coord: 3..22 score: 4.1e-30coord: 28..44 score: 4.1e-30coord: 65..81 score: 4.1
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 1..83 score: 7.7
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	GENE3D	3.30.1330.20	no description	coord: 1..26 score: 8.5
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 1..36 score: 0.0
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600	no description	coord: 27..82 score: 2.2
None	No IPR available	PANTHER	PTHR11588:SF11	TUBULIN ALPHA-1 CHAIN	coord: 1..93 score: 1.6
None	No IPR available	SEG	seg	seg	coord: 76..92 score
None	No IPR available	SEG	seg	seg	coord: 69..78 score
None	No IPR available	SEG	seg	seg	coord: 33..46 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT627399 ID=GT627399; Name=GT627399; organism=Lens culinaris; type=EST; length=454bp
CAGCCACCAACTGTTGTTCCTGGAGGTGACCTTGCTAAGGTACAAAGAGC
TGTTTGCATGATTTCAAACTCCACCAGTGTAGCTGAGGTGTTTGGTCGCA
TTGATCACAAGTTTGATCTCATGTATGCCAAACGCGCTTTTGTTCATTGG
TATGTGGGTGAGGGTATGGAAGAAGGTGAATTTTCTGAAGCTCGTGAGGA
TCTTGCTGCTCTGGAAAAGGATTATGAAGAAGTTGGTGCTGAATCTGGTG
AGGGTGGTGATGAAGATCTGGAAGATTACTAGAATCTTTTTCAGATTCTT
GTTTCCTTGGTTTTTTTATTGATCTGTTTTCTATGTGGGTGTTCCTTTGG
ATGCATTGTTTTCATACCTCGTTGTTATTTTGATATATGTTGTTCTGTAC
CTAAAGATGTTATCTACTTCTCAATGACATGCTACCTTCTCTAAAATTAG
AAGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding
GO:0005198	structural molecule activity
GO:0003924	GTPase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule
GO:0043234	protein complex

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process
GO:0007018	microtubule-based movement
GO:0051258	protein polymerization

Vocabulary: **INTERPRO**
Term	Definition
IPR000217	Tubulin
IPR002452	Alpha_tubulin
IPR008280	Tub_FtsZ_C
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR023123	Tubulin_C

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