GT627827

EST Overview


Name	GT627827
Unique Name	GT627827
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	811

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT627827 vs. TrEMBL
Match: B5LMR8_CICAR (Hypothetical chloroplast RF19 OS=Cicer arietinum GN=ycf1 PE=4 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 1.224e-68
Identity = 146/299 (48.83%), Postives = 188/299 (62.88%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTNDILINRIHGLLLCHNSNSSEFEHETD----------------QFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDANPKESQIRSPKADRIVLYSE---------KKKSQNDNPDEKDSAK-----EIALPNYSREPDYCRDIIRGSMRAQRRK 808
            KL NEF +RA+ LDK Y    P DV       N +RLC+D+   +YL K YDPFLNGRFRGEI+K+FSP      N I +N+IHGLLL  N+N  E E + D                +FDRK L  E GFFFN+I+KFSEK VSSLNFD  YLFPE E V  YSEEK  +++FL DAIRT+  N TI+N     +INEI KE+PRWSY+L+DE+  L +++  E++IR  +A+R+V++S          K K +++  D  +S K     E +L  YSREPD+ R II+GSMR QRRK
Sbjct:  421 KLINEFFKRAQFLDKNYKNLSPPDV-----FANSVRLCNDDMENKYLTKIYDPFLNGRFRGEIKKNFSP---PERNSIFVNKIHGLLLSSNTNDPELEQKIDPELEQKIDPELEQKIDRFDRKFLFNEFGFFFNVINKFSEKPVSSLNFDRFYLFPEHEQVKKYSEEKKIKKEFLFDAIRTDEKNKTIFNSTNCTEINEIEKEVPRWSYKLIDEVQQLTESSAAEAEIRCARAERVVVFSAQTESLDFRIKNKHKSNIDDNGNSPKLHPETEFSLVKYSREPDFNRGIIKGSMRPQRRK 711

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D5MAV3_LATSA (Putative uncharacterized protein ycf1 OS=Lathyrus sativus GN=ycf1 PE=4 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.954e-66
Identity = 145/281 (51.60%), Postives = 188/281 (66.90%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTNDILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTN-DTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDANPK-ESQIRSPKADRIVLYSEKKKS-----QND-----NPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            +LS E  QRAKLLDKK  +    +  L D+LENR+RL DD    +YL K YDPFLNG  RGEIQKS S   T  +N ILINRIHGLLLC N+NS E E + D+ DRKL+ TE+GF+F ++SKFSEKSVS+ +FDGL   PE E V IYS+EK  +R+FL DAIRT P N  TI+NRKL  +I EISKE+PRW+Y+L+DE   +++   K E  IRSP A+ +V+++ +  S     QN+       + +D   E ++  Y    ++ RD+IRGS R QRRK
Sbjct:  410 QLSKELFQRAKLLDKKVKKGKKFN--LVDVLENRVRLSDDRGRKKYLPKIYDPFLNGPARGEIQKSVSKKKTFDSNSILINRIHGLLLCMNTNSPELEQKIDKLDRKLVFTEMGFYFKIMSKFSEKSVSNFHFDGLSSVPEHEQVKIYSKEKKIKRNFLFDAIRTNPFNHKTIFNRKLCSEIKEISKEVPRWNYELLDETEYMLEPGYKQEHHIRSPNAEYVVIFNMESSSLGPRLQNNAFAHQYKEAEDRRNEFSVACYVPGAEFNRDLIRGSWRPQRRK 688

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D5MAI4_PEA (Putative uncharacterized protein ycf1 OS=Pisum sativum GN=ycf1 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.552e-66
Identity = 146/288 (50.69%), Postives = 195/288 (67.71%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFS--PLITN---TTNDILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMD--ANPKESQI--RSPKADRIVLYSEKKKSQNDNPDEKDSAK---------EIALPNYSREPDYCRDIIRGSMRAQRRKI 811
            +LSNE  Q+AK++D+K  +     ++  D+ + R RL DD+   +YL K YDPF+NG FR EIQ + S  P ITN   TTN IL+N+IHGLL+ +NSNS EF+ + DQFDRKLL T+IGFF  LISKFSEKSVSSL+FD L+LFPE E   IYSEEK ++R+F  DAI+T  TNDTI+   LS +INEISKE+PRW YQL+D+I V ++   + K+ QI  R P  ++IV   E   S+ D    +D ++         +  +P++ RE D+ R+IIRGS+  QRRKI
Sbjct:  419 QLSNELFQKAKIIDRKDKK----KINPADVFDIRRRLSDDKQKRKYLPKIYDPFVNGGFRAEIQNNVSLRPFITNETDTTNSILVNKIHGLLISNNSNSPEFDQKIDQFDRKLLLTKIGFFVKLISKFSEKSVSSLDFDALHLFPEHEQGKIYSEEKKKKRNFFFDAIQTTHTNDTIFTTSLSSEINEISKEVPRWEYQLIDDIEVGLNPAIHTKDPQICCRLP-GEQIVFSCETLFSKTDEAYNRDFSRKHPSIDPSTDFRIPHFLREMDFDREIIRGSVHGQRRKI 701

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D3WDB3_9MAGN (Putative RF1 protein OS=Berberidopsis corallina GN=ycf1 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 5.896e-55
Identity = 131/288 (45.49%), Postives = 182/288 (63.19%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVD------------EIAVLMDANPKESQIRSPKADRIVLYSEKKKSQNDNPD--EKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            LSNEF++R   LDK             D+LE RIRLC+DE+  +YL K YDPFLNG +RG I+K FS  I N T+       + +N+IHG+LL   ++  EFE + D+ D+K LSTEIG FF LIS+F+ +S SS N  GL LFPEQE   I SE++ +  +FL DA+ T+  + TI  RK S  INE+SK++PRWSY+L+D            E+AV +D      +IRS KA R+V++++ +++ +   D    + A E+AL  YS++ D+ RDII+GSMRAQRRK
Sbjct:  467 LSNEFIKRIAALDKGSLSM--------DVLEKRIRLCNDETKKEYLPKMYDPFLNGPYRGTIKKMFSSSIINETSIENSIETVWLNKIHGILL---TDYREFEQKIDKLDKKSLSTEIGHFFTLISEFAVESPSSFNLKGLSLFPEQEQGRIDSEDRAKFFEFLFDAVITDLNDQTI--RKKSIGINEMSKKVPRWSYKLIDDLEQQEGGENEEEVAVALD-----HEIRSRKAKRVVIFTDNQQNPDTYTDTNNPEQADEVALIRYSQQSDFRRDIIKGSMRAQRRK 736

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D3WEP1_LIQST (Putative RF1 protein OS=Liquidambar styraciflua GN=ycf1 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.739e-52
Identity = 125/285 (43.86%), Postives = 176/285 (61.75%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDAN----PKESQIRSPKADRIVLYSEKKK-------SQNDNPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            +SNEF+ R + L K           L D+LE R RLC+DE+  +YL KKYDPFLNG +RG I+  F P I N T+       I IN+IHG+LL   ++  EFE + D FD K LST+I  F NLI +F+ +S S+LN  GL LFPEQ+   + S+++ +   FL DAI T+P + TI  RK S  I EI K++PRWSY+L+D++      N     ++ +IRS KA R+V++++ +K       +   + D  D A E+AL  YS++ D+ RD+I+GSMRAQRRK
Sbjct:  470 ISNEFINRIEALAKGSL--------LLDVLEKRTRLCNDENEKEYLSKKYDPFLNGPYRGTIKSFFLPSIINETSIVNSIETIWINKIHGILLV--TDYREFEQKIDMFDSKSLSTKIDNFLNLIGEFAGESTSNLNLKGLSLFPEQDQGRVDSKDQAKFFKFLFDAIITDPKDQTI--RKKSIGIKEIRKKVPRWSYKLIDDLEQQEGENEEDVSEDHEIRSRKAKRVVIFTDNEKNTDTDTYTNTKDTDNPDPADEVALIRYSQQSDFRRDMIKGSMRAQRRK 742

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D3WEH2_HEUSA (Putative RF1 protein OS=Heuchera sanguinea GN=ycf1 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 3.348e-50
Identity = 118/288 (40.97%), Postives = 172/288 (59.72%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDANPKES----QIRSPKADRIVLYSEKKKSQNDNPD---------EKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRKI 811
            LSNEF+ R + LDK             D+LE + RLC+DE+  +YL KKYDPFLNG +RG I+  F P I N T+       + +N+IHG+LL  +    EF+ + + FDRK L   +  F NLIS+F+ +S    N  GL LFP++E   IYS+++T+   FL +A+ T+  +  I    L   INEI+K++PRWSY+L+D++      N ++     QIRS KA R+V++++ ++    NPD           D A E+AL  YS++ D+ RDII+GSMRAQRRK+
Sbjct:  464 LSNEFLSRIEALDKGSLPL--------DVLEKKTRLCNDETKKEYLPKKYDPFLNGPYRGTIKFIFPPSIINETSIGNSIGTLWLNKIHGILLATDYGDREFQQKINAFDRKSLPISVDNFLNLISEFAGESPLDFNLKGLSLFPDEEQKRIYSKDQTK---FLFNAVITDTNDQKIRKNDLGIGINEITKKIPRWSYKLIDDLEQQERENEEDEAQDHQIRSRKAKRVVIFTDNQQ----NPDTYTTTTDTKNSDPADEVALIRYSQQSDFRRDIIKGSMRAQRRKL 736

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D3WBM2_9AQUA (Putative RF1 protein OS=Ilex cornuta GN=ycf1 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.662e-49
Identity = 126/286 (44.06%), Postives = 173/286 (60.49%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLIT--------NTTNDILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDAN----PKESQIRSPKADRIVLYSEKKKSQNDNPDEKDS-----AKEIALPNYSREPDYCRDIIRGSMRAQRRKI 811
            ++NEF+ R + LD        +     DILE R RLC+DE+   YL K YDPFLNG +RG I+K FSP I+        N    I IN+IHG+LL  N++  EFE + D FD+K  S EI  F +LI+KF+ +S SS N      F +QE   I SE  T+  +FL +AI T+P +  I  RK S  INEISK++PRWSY+L+ ++      N    P + QIRS KA R+V+++ KK  QN +P+ KD+       E+AL  YS++ D+ R+II+GSMR+Q RKI
Sbjct:  460 INNEFINRIETLD--------MGSLFLDILEKRTRLCNDETKKDYLPKMYDPFLNGPYRGTIKKWFSPSISIINQPSIENLIETIGINKIHGILL-PNTDCREFEQKIDPFDKKPFSAEISHFSSLITKFARESRSSFNLKRFSFFSKQEQGRIDSENGTKFLNFLFNAIITDPNDQKI--RKNSIGINEISKKIPRWSYKLITDLEQQSGENQEGVPVDHQIRSRKAKRVVIFTSKK--QNVDPNTKDTNNADQTDEVALIRYSQQSDFRRNIIKGSMRSQMRKI 732

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D3WD44_XIMAM (Putative RF1 protein OS=Ximenia americana GN=ycf1 PE=4 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 9.118e-48
Identity = 121/288 (42.01%), Postives = 174/288 (60.42%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSP--------LITNTTNDILINRIHGLLLCHNSNSSEFEHETDQ-FDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDANP-----KESQIRSPKADRIVLYSEKKKSQNDNPDEKDS-----AKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            K SNEF+ R + LDK        +    DILE R RLC+DE+  +YL K YDPFLNG +RG I+K  SP         I N+   + IN+IH +L   +++  EF+ + D  FD+K LSTEIG F  LIS+F+E+S  S N   L LFPEQ  ++  SE + +   FL DAI T+P N     RK S  + +ISK++PRWSY+L+DE+      N      ++ +IRS KA R+V++++ +++ +   + KD+       E++L  YS++ D+ RDII+GSMRAQRRK
Sbjct:  464 KQSNEFLNRIEALDK--------ESPFLDILEKRTRLCNDETEKEYLPKIYDPFLNGPYRGTIKKLSSPSIINRNETSIENSIETVWINKIHDIL---HTDYREFKQKIDNTFDKKALSTEIGHFVTLISEFAEESTPSFNLKRLSLFPEQGRID--SEGRKKNWKFLFDAILTDPNNQKTI-RKKSIGVKKISKKVPRWSYKLIDELEQQEGENEEDVVVEDHEIRSRKAKRVVIFTDNQQNTDTYTNTKDTNDPDQTDEVSLIRYSQQSDFRRDIIKGSMRAQRRK 737

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D3J8L6_9FABA (Putative uncharacterized protein ycf1 OS=Vigna radiata GN=ycf1 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.008e-46
Identity = 129/291 (44.33%), Postives = 168/291 (57.73%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTT----NDILINRIHGLLLC------HNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNI-YSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDI--NEISKELPRWSYQLVDEIAVLMDANPKE-SQIRSPKADRIVL------YSEKKKSQNDNPDEKDSAK--EIALPNYSREPDYCRDIIRGSMRAQRRK 808
            KLSNEF+ R KL+DKK        + L DI EN+IR C+DE+  +YL K  DPFLNG FRG I+K FS  I +      N I IN+I  + L       + SNS + E     FD+KLL T   F FNLIS+FS+K VSSLN    Y  PEQ  +N  Y  EK +      DAI T+       NRK +  I  NEI K++PRWSY+ +DE+  L     K+ SQIRS K  R+V+      +  K K+  D  D +++ K  E+AL  YS++ D+ RDII+GS+RAQRRK
Sbjct:  381 KLSNEFINRTKLIDKK-------SISL-DIFENKIRFCNDETQKKYLTKTKDPFLNGPFRGRIKKGFSTSIQHENSYKKNHIFINKIQDIFLSNKIDKKNTSNSPKLEENRKTFDKKLLVTT--FLFNLISQFSKKLVSSLNSQVPYKEPEQVKMNSNYDTEKKQIIKIFFDAITTDLNEKRKVNRKTTKSIKRNEICKKVPRWSYKFIDELEQLGGKIEKDNSQIRSRKGKRVVILTNKHKFFHKYKTYKDLGDTENTEKKNELALKRYSQQSDFRRDIIKGSIRAQRRK 661

[Close]

BLAST of GT627827 vs. TrEMBL
Match: D3WAY5_AUCJA (Putative RF1 protein OS=Aucuba japonica GN=ycf1 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.483e-45
Identity = 118/283 (41.70%), Postives = 170/283 (60.07%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDAN----PKESQIRSPKADRIVLYSEKKKSQNDNPDEKDS-----AKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            L+NEF+ R + L+K+            DILE R RLC+DE+  +YL K YDP LNG +RG I+K  SP I N T+         INRIH +LL  +++  EFE + D FD+K L TEI  F  LI++F+ ++ SSLN  GL L  +Q  ++  SE+ ++   FL + I   P    I  RK S  I EISK++PRWSY+L+ ++      +    P + QIRS KA R+V++++ K  QN +P+ KD+       E+AL  YS++ D+ ++II+GSMRAQRRK
Sbjct:  461 LNNEFLNRIEALNKRSLPL--------DILEKRTRLCNDETKKEYLHKMYDPLLNGPYRGTIKKRVSPSIVNETSIENFIEPFGINRIHAILL-SDTDYKEFEQKIDTFDKKTLPTEISHFLTLINEFAREAKSSLNLKGLSLLSDQGKID--SEKGSKFLKFLFNVILIYPNGKKI--RKKSIGIKEISKKVPRWSYKLITDLEQQSGEHKEDVPVDHQIRSRKAKRVVIFTDNK--QNTDPNTKDTNTPDQTDEVALIRYSQQSDFRQNIIKGSMRAQRRK 728

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_LOTJA (Putative membrane protein ycf1 OS=Lotus japonicus GN=ycf1 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.233e-63
Identity = 142/280 (50.71%), Postives = 183/280 (65.36%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTT---NDILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDANPKE-SQIRSPKADRIVLYSEKKKSQND-------NPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            KL+NEF+ R ++LDK   +  PVD     I ENRIRLC+DE   +YL K+YDPFLNG  RG+IQK FSP I   T   N + IN+IHG+L  + +N  +FE + + FDRK L T+I FFFNLI+KFS KSVSSLNF+GLYLFP+     + S++K     FL D IR +  ++ I N +    INEI K+LPRWSY L+DE+  L      E  QIRS KA R+VL +  K SQND       + D  +  KE+AL  YS++PD+ RDII+GS+RAQRRK
Sbjct:  407 KLTNEFLNRVEVLDK---ESLPVD-----IFENRIRLCNDEKKQKYLTKEYDPFLNGPCRGQIQKWFSPPIQKETYKKNSLFINKIHGILFSNTNNYPKFEQKKNIFDRKSLLTDINFFFNLITKFSRKSVSSLNFEGLYLFPKDNKGKMSSKKK----KFLFDTIRPDLNDNKIVNLQKCIGINEIVKKLPRWSYNLIDELEQLEGKKKVEYHQIRSRKAKRVVLLT--KNSQNDDNYDETTDTDNTEKKKELALIRYSQQPDFRRDIIKGSIRAQRRK 672

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_SOYBN (Putative membrane protein ycf1 OS=Glycine max GN=ycf1-A PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.336e-59
Identity = 146/294 (49.66%), Postives = 183/294 (62.24%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLI----TNTTNDILINRIHGLLLC------HNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNI-YSEEKTRQRDFLLDAIRTEPTNDTIY--NRKLSPDINEISKELPRWSYQLVDEIAVLMDANPKES-QIRSPKADRIVLYSEKKK-----------SQNDNPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            KLSNEFV RAK++DK+            DILENRIRL +DE+ T+YL K YDPFLNGRFRG+I+  FS  I        N ILIN+IHG+L+       +NSN  E E + + FDRK L T   FFFNLISKFS+K VSSL+F+ L LFPE E V I Y EEK +    L DAIRT+    TI   NR     INEI K++PRWSY+ +DE+  L   N  E+ QIRS KA R+V+ + K K              DN ++K +  E+AL  YS++ D+ RDII+GS+RAQRRK
Sbjct:  406 KLSNEFVNRAKVMDKELISL--------DILENRIRLSNDETKTKYLTKIYDPFLNGRFRGQIENVFSTSIQYEKNEKKNTILINKIHGILISNNTYKKNNSNYPELEKKINIFDRKSLVTTF-FFFNLISKFSKKLVSSLSFETLSLFPEHEQVKINYEEEKKQIIKILFDAIRTDLNEKTIVNGNRTKCIRINEIRKKVPRWSYKFIDELEQLEGKNEAENYQIRSRKAKRVVILTNKSKFFKKYDTYNPTGDTDNAEKKKN--ELALIRYSQQSDFRRDIIKGSIRAQRRK 688

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_PHAVU (Putative membrane protein ycf1 OS=Phaseolus vulgaris GN=ycf1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 134/300 (44.67%), Postives = 171/300 (57.00%), Query Frame = 2

Query:    2 KLSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLI----TNTTNDILINRIHGLLLC--------HNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYS---EEKTRQRDFLLDAIRTEPTNDTIYNRK--LSPDINEISKELPRWSYQLVDEIAVL---MDANPKESQIRSPKADRIVLYSEKKK-----------SQNDNPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            KLSNEF+ R KL+DK+            DI ENRIRLC+DE+   Y  K  DPFLNG FRG I+K FS  I    T   N ILIN+I  + L         +N N  + E     F++KLL T   F FNLIS+FS+KSVSS N++ LYLFPE E V + S   EEK      L DAI T+    T  NR    S  INEI K++PRWSY+ +DE+  L   M+A+   SQIRS KA R+V+ + K K              +N +  +   E+AL  YS++ D+ RDII+GS+RAQRRK
Sbjct:  401 KLSNEFITRTKLIDKELISL--------DIFENRIRLCNDETKKNYFTKITDPFLNGPFRGRIKKGFSTSIQDEKTYKKNHILINKIQEIFLYNSKKIPKKNNRNYQKLEENLKTFNKKLLVTT--FLFNLISQFSKKSVSSFNYEVLYLFPEHEQVKMNSNLEEEKKLIIKILFDAITTDLNEKTKGNRNNTKSIKINEICKKVPRWSYKFMDELEELGGKMEAD--NSQIRSRKAKRVVILTNKSKFFKKYNTYNDLGDTENTENTEKKNELALRRYSQQSDFRRDIIKGSIRAQRRK 688

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.950e-48
Identity = 120/285 (42.11%), Postives = 172/285 (60.35%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEI----AVLMDANPKESQIRSPKADRIVLYSEKKKSQNDNPDEKDS-------AKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            L+ EF+ R ++LDK+            DILE R RLC+D++  +Y+ K YDP LNG +RG I+K FSP I N T+       + INRIH + L  N++  EFE + D  D+K LSTEI  F  LI++F  +  SSLN   L LF +QE   + SE++T+   F+ +AI     N T   +KL   I EISK++PRWS++L+ E+        +  P + QIRS KA R+V+++    +QN++P+ KD+        KE+AL  YS++PD+ R II+GSMRAQRRK
Sbjct:  471 LNKEFLNRLEVLDKESFSL--------DILETRTRLCNDDTKKEYVPKMYDPLLNGPYRGTIKKEFSPSIINNTSLENLKERVRINRIHTIFL-PNTDYQEFEQKVDTVDKKPLSTEIDEFLTLINEFDNEPKSSLNLKDLSLFSDQEQGRVNSEKRTKFVKFVFNAI---DPNGTTSEKKLI-GIKEISKKIPRWSHKLITELEQQSGDYQEGVPLDHQIRSRKAKRVVIFT--ANNQNNDPNTKDTDTADQDQTKEVALIRYSQQPDFRRGIIKGSMRAQRRK 740

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.572e-48
Identity = 123/289 (42.56%), Postives = 173/289 (59.86%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSP------LITNTTNDI---LINRIHGLLLCHNSNSSEFEHET--DQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDANPKES----QIRSPKADRIVLYSEKKKSQN-----DNPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRKI 811
            +S EF+ R + LDK             D+LE R RLC+D++  Q L K YDPFLNG +RG I+K  S       LIT+  N I    IN+IHG+L    ++  EFE +   D FD K LST+I  F   ISKF+ +S +SLN+ GL L  EQE    YS+++ +   FL  A+ T+P N  I N+ +   INEI K++PRWSY+L+D++        +ES    QIRS KA R+V++++ +   N     +N  ++D  +E+AL  YS++PD+ RDII+GSMRAQRRKI
Sbjct:  470 VSKEFINRIEALDKGSLTL--------DVLEKRTRLCNDKTEQQCLPKVYDPFLNGPYRGTIKKVSSSSIMNDYLITSIENSIEKLWINKIHGIL---PTDYREFEQKEKIDTFDGKSLSTDIFHFLTPISKFAGESTTSLNWKGLPLLAEQE--RNYSKDQAKYLKFLFAAVTTDPNNQIIRNKSIV--INEICKKVPRWSYKLIDDLEQQEGEYEEESAEDHQIRSRKAKRVVIFTDNEPDTNTHTNTNNTSDRDEVEEVALIRYSQQPDFRRDIIKGSMRAQRRKI 743

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_TOBAC (Putative membrane protein ycf1 OS=Nicotiana tabacum GN=ycf1 PE=3 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.464e-47
Identity = 118/285 (41.40%), Postives = 169/285 (59.30%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEI----AVLMDANPKESQIRSPKADRIVLYSEKKKSQNDNPDEKDS-------AKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            L+ EF+ R ++LDK+            DILE R RLC+D++  +Y+ K YDP LNG +RG I+K FSP I N T+       + INRIH + L  N++  E E + D   +K LSTEI  F  LI++F  +  SSLN   L LF +QE   + SE++T+   F+ +AI    T     + K S  I EISK++PRWS++L+ E+        +  P + QIRS KA R+V+++    +QN++PD KD+        KE+AL  YS++PD+ R II+GSMRAQRRK
Sbjct:  474 LNKEFLNRLEVLDKESFSL--------DILETRTRLCNDDTKKEYVPKMYDPLLNGPYRGTIKKKFSPSIINNTSLENLKERVRINRIHTIFL-PNTDYQELEQKVDTVAKKPLSTEIDEFLTLINEFGNEPKSSLNLKDLSLFSDQEQGRVNSEKRTKFVKFVFNAIAPNGTT----SEKKSIGIKEISKKIPRWSHKLITELEQQSGDYQEGVPLDHQIRSRKAKRVVIFT--ANNQNNDPDTKDTDTADQDQTKEVALIRYSQQPDFRRGIIKGSMRAQRRK 743

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_NICSY (Putative membrane protein ycf1 OS=Nicotiana sylvestris GN=ycf1-A PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.464e-47
Identity = 118/285 (41.40%), Postives = 169/285 (59.30%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEI----AVLMDANPKESQIRSPKADRIVLYSEKKKSQNDNPDEKDS-------AKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            L+ EF+ R ++LDK+            DILE R RLC+D++  +Y+ K YDP LNG +RG I+K FSP I N T+       + INRIH + L  N++  E E + D   +K LSTEI  F  LI++F  +  SSLN   L LF +QE   + SE++T+   F+ +AI    T     + K S  I EISK++PRWS++L+ E+        +  P + QIRS KA R+V+++    +QN++PD KD+        KE+AL  YS++PD+ R II+GSMRAQRRK
Sbjct:  474 LNKEFLNRLEVLDKESFSL--------DILETRTRLCNDDTKKEYVPKMYDPLLNGPYRGTIKKKFSPSIINNTSLENLKERVRINRIHTIFL-PNTDYQELEQKVDTVAKKPLSTEIDEFLTLINEFGNEPKSSLNLKDLSLFSDQEQGRVNSEKRTKFVKFVFNAIAPNGTT----SEKKSIGIKEISKKIPRWSHKLITELEQQSGDYQEGVPLDHQIRSRKAKRVVIFT--ANNQNNDPDTKDTDTADQDQTKEVALIRYSQQPDFRRGIIKGSMRAQRRK 743

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.239e-46
Identity = 119/285 (41.75%), Postives = 170/285 (59.65%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSPLITNTTN------DILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLV---DEIAVLMDANPKESQIRSPKADRIVLYSEKKK-------SQNDNPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRKI 811
            L  EF+ R + LD              D+LE R RLC+D +  +YL K YDPFLNG +RG I+K FSP I N T+         IN+I+G+L   +    EFEH    FDRK LST+IG+F NLI++F+ +S S+LN   L LFPEQ  V+  SE++ +  +F  D + T+P + TI  RK S  I EISK++PRWSY+L+   +E   L+       +IRS K+  +V++++ ++       + N + D  +   E+AL  YS++ D+ RDII+GSMRAQRRKI
Sbjct:  463 LRKEFITRIEALDNGSLTL--------DVLEKRTRLCNDATKKEYLPKIYDPFLNGPYRGTIKKMFSPSIINETSRENSIEKFRINKIYGILFAIDYR--EFEHT---FDRKSLSTKIGYFLNLINQFTIESPSNLNLKRLSLFPEQGKVDSDSEDQAKFLNFFFDRVITDPKDQTI--RKKSIGIKEISKKVPRWSYKLMKNEEEGETLV----VYQEIRSRKSKHVVIFTDNQQNADTYTANANKDIDNSEQTNEVALIRYSQQSDFRRDIIKGSMRAQRRKI 728

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.114e-46
Identity = 116/286 (40.56%), Postives = 168/286 (58.74%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFS------PLITNTTNDILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDANPK----ESQIRSPKADRIVLYSEKKKSQN--------DNPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            L+N+ +   K LDK  +    +     D+LE R RLC D +  +YL K YDPFLNG +RG+I+K FS        I N      IN+IHGL L  N    E +    + D++LLSTE+ FF NLI++F+ K  SSLNF   YL PE + + I  E + ++  FL +   T+P N TI  RK +  I EI K++P+WSY+L+D++      N +    +SQIRS K  R+++++ + ++ N        +N DE+D   +IAL  YS++ D+ RDII+GSMRAQRRK
Sbjct:  432 LNNKLINIIKDLDKALDSKFLI----LDVLEKRPRLCHDNTKKKYLPKVYDPFLNGAYRGQIKKRFSLSIKDKVSIQNYIERGWINKIHGLFLIINYLEFEEKKPFHRIDKRLLSTEMNFFLNLINEFNGKPTSSLNFKKFYLLPEHKQLRINLEGREKKIRFLFERFLTDPNNKTI--RKQAIGIKEIRKKIPQWSYKLIDDLEQEEGENEEALGTDSQIRSRKCKRVLIFNHELENTNGYSNSQDTNNNDERD---DIALIRYSQQSDFRRDIIKGSMRAQRRK 708

[Close]

BLAST of GT627827 vs. SwissProt
Match: YCF1_COFAR (Putative membrane protein ycf1 OS=Coffea arabica GN=ycf1 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.761e-46
Identity = 116/279 (41.58%), Postives = 165/279 (59.14%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSP---LITNTTNDILINRIHGLLLCH-NSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDAN----PKESQIRSPKADRIVLYSEKKKSQNDNPDE--KDSAKEIALPNYSREPDYCRDIIRGSMRAQRRKI 811
            L+NEF  R + LDK++           DILE R RLC+D++  +Y  K YDPFL G +RG I+   SP    I N  + I INRIH +LL   N +  EFE + + FD+K L TE+G F  L  +F  +  S+LN  GL LF +Q+   I  E++ +   FLL+ IRT P +  I  +K S  I EI K++PRWSY+L+ ++      +    P + QIRS KA R+V++++ K++ + N D    D   E+AL  YS++ D+ R II+GSMRAQRRKI
Sbjct:  464 LNNEFRNRIQALDKEFLFL--------DILEARTRLCNDDTKNEYFPKMYDPFLKGAYRGRIKTILSPSKTAIDNLRDTIGINRIHSILLPDINIDYQEFEQKANLFDKKQLLTEMGNFLPLAGEFDIEQKSNLNMKGLSLFSDQDQEKIDFEKERKIFKFLLNVIRTYPIDQKI--QKESVGIKEIIKKVPRWSYKLITDLEQQSGEHQENVPVDHQIRSRKAKRVVIFTDNKENTDPNKDNDTSDQRNEVALIRYSQQSDFRRRIIKGSMRAQRRKI 732

[Close]

BLAST of GT627827 vs. TAIR peptide
Match: ATCG01130.1 (| Symbols: YCF1.2 | Ycf1 protein | chrC:123884-129244 REVERSE LENGTH=1786)

HSP 1 Score: 147.517 bits (371), Expect = 8.170e-36
Identity = 109/287 (37.98%), Postives = 156/287 (54.36%), Query Frame = 2

Query:    5 LSNEFVQRAKLLDKKYNQFHPVDVDLEDILENRIRLCDDESNTQYLIKKYDPFLNGRFRGEIQKSFSP--LIT-----NTTNDILINRIHGLLLCHNSNSSEFEHETDQFDRKLLSTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEQELVNIYSEEKTRQRDFLLDAIRTEPTNDTIYNRKLSPDINEISKELPRWSYQLVDEIAVLMDAN----PKESQIRSPKADRIVLYSEKKK--------SQNDNPDEKDSAKEIALPNYSREPDYCRDIIRGSMRAQRRK 808
            L  EF+ R + LDK+++        +E+ILE   R C +E+  +YL K YDPFL+G  RG I+K   P  +IT     N      IN+IHGLLL    N  +FE   ++F+RK LS E       +S FSE              P+QE   I SEE+ +   FL D +RT+  + T+    +  D  EI+K++PRWSY+L+ E+  L   N    P E  IRS KA R+V++++K+           N N D+ D   E+AL  YS++ D+ R+II+GSMR+QRRK
Sbjct:  444 LKKEFLNRIEALDKEWS--------VENILEKTTRFCYNEAKKEYLPKIYDPFLHGISRGRIKK-LPPFQIITETYRKNNLGGSWINKIHGLLL--KINYKKFEQTIEKFNRKSLSIE-----KKLSFFSE--------------PQQE-EKINSEEEIKTFKFLFDIVRTDSNDQTLIKNFM--DFPEINKKVPRWSYKLISELEELEGENEENVPMEPGIRSRKAKRVVVFTDKEPHGEIYTNLKDNQNSDQND---EMALIRYSQQSDFRREIIKGSMRSQRRK 694

The following BLAST results are available for this feature:

BLAST of GT627827 vs. TrEMBL
BLAST of GT627827 vs. SwissProt
BLAST of GT627827 vs. TAIR peptide

BLAST of GT627827 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B5LMR8_CICAR	1.224e-68	48.83	Hypothetical chloroplast RF19 OS=Cicer arietinum G...	[more]
D5MAV3_LATSA	1.954e-66	51.60	Putative uncharacterized protein ycf1 OS=Lathyrus ...	[more]
D5MAI4_PEA	2.552e-66	50.69	Putative uncharacterized protein ycf1 OS=Pisum sat...	[more]
D3WDB3_9MAGN	5.896e-55	45.49	Putative RF1 protein OS=Berberidopsis corallina GN...	[more]
D3WEP1_LIQST	2.739e-52	43.86	Putative RF1 protein OS=Liquidambar styraciflua GN...	[more]
D3WEH2_HEUSA	3.348e-50	40.97	Putative RF1 protein OS=Heuchera sanguinea GN=ycf1...	[more]
D3WBM2_9AQUA	1.662e-49	44.06	Putative RF1 protein OS=Ilex cornuta GN=ycf1 PE=4 ...	[more]
D3WD44_XIMAM	9.118e-48	42.01	Putative RF1 protein OS=Ximenia americana GN=ycf1 ...	[more]
D3J8L6_9FABA	1.008e-46	44.33	Putative uncharacterized protein ycf1 OS=Vigna rad...	[more]
D3WAY5_AUCJA	2.483e-45	41.70	Putative RF1 protein OS=Aucuba japonica GN=ycf1 PE...	[more]

BLAST of GT627827 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
YCF1_LOTJA	7.233e-63	50.71	Putative membrane protein ycf1 OS=Lotus japonicus ...	[more]
YCF1_SOYBN	6.336e-59	49.66	Putative membrane protein ycf1 OS=Glycine max GN=y...	[more]
YCF1_PHAVU	1.083e-50	44.67	Putative membrane protein ycf1 OS=Phaseolus vulgar...	[more]
YCF1_NICTO	2.950e-48	42.11	Putative membrane protein ycf1 OS=Nicotiana toment...	[more]
YCF1_PLAOC	6.572e-48	42.56	Putative membrane protein ycf1 OS=Platanus occiden...	[more]
YCF1_TOBAC	1.464e-47	41.40	Putative membrane protein ycf1 OS=Nicotiana tabacu...	[more]
YCF1_NICSY	1.464e-47	41.40	Putative membrane protein ycf1 OS=Nicotiana sylves...	[more]
YCF1_VITVI	1.239e-46	41.75	Putative membrane protein ycf1 OS=Vitis vinifera G...	[more]
YCF1_MORIN	2.114e-46	40.56	Putative membrane protein ycf1 OS=Morus indica GN=...	[more]
YCF1_COFAR	2.761e-46	41.58	Putative membrane protein ycf1 OS=Coffea arabica G...	[more]

BLAST of GT627827 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ATCG01130.1	8.170e-36	37.98	\| Symbols: YCF1.2 \| Ycf1 protein \| chrC:123884-129...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Uncharacterised protein family Ycf1	PFAM	PF05758	Ycf1	coord: 1..270 score: 5.3

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT627827 ID=GT627827; Name=GT627827; organism=Lens culinaris; type=EST; length=811bp
GAAACTAAGCAATGAATTTGTTCAACGAGCAAAACTTCTAGATAAGAAAT
ATAATCAATTTCATCCTGTGGATGTGGATTTAGAGGACATATTGGAAAAT
AGAATTAGATTGTGTGATGATGAGAGCAACACACAATACTTAATTAAAAA
ATATGATCCTTTCTTGAATGGACGATTTCGTGGAGAAATCCAAAAAAGCT
TTTCACCCTTGATTACAAACACAACAAACGACATTTTGATAAATAGGATT
CATGGACTGCTTCTTTGTCATAATAGTAATTCTTCAGAATTTGAACATGA
AACAGATCAATTTGATAGAAAATTATTATCAACTGAAATTGGGTTTTTTT
TTAACTTAATCAGTAAATTTTCGGAAAAATCAGTATCAAGTTTGAATTTT
GACGGACTCTATTTATTTCCAGAACAGGAACTAGTAAATATCTATTCCGA
AGAAAAAACAAGACAAAGAGATTTCTTATTGGACGCAATTCGAACCGAAC
CTACCAATGATACAATTTATAATAGAAAACTATCTCCTGACATAAACGAA
ATAAGTAAAGAACTTCCTCGATGGTCATACCAATTAGTCGACGAAATAGC
GGTATTGATGGACGCGAACCCAAAGGAGTCTCAGATTCGTTCTCCAAAAG
CTGACCGTATAGTTCTTTATAGTGAGAAAAAAAAGTCACAGAATGATAAT
CCTGATGAAAAGGACTCAGCTAAGGAAATTGCTCTACCTAATTATTCACG
CGAACCAGATTATTGCCGAGATATAATCAGAGGATCTATGCGCGCTCAAA
GGCGTAAAATA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR008896	TIC214

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