GT622496

EST Overview
NameGT622496
Unique NameGT622496
TypeEST
OrganismLens culinaris (lentil)
Sequence length811
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT622496 vs. TrEMBL
Match: C6TCL9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 3.112e-72
Identity = 134/211 (63.51%), Postives = 160/211 (75.83%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLLHS------SPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAFEIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVDHKSIPWSYQ 616
            CS+ WR++CFSD IW SL+ NRWPLL S      S  SPN K  R+LY ER ++L LRA S  +FL+ACS +ESLEV DYL+A + +    FGFED+QRFLF P+MNVL+NLVG+HYCLT LGIPGD+LV+ LR  EIS+R VC+KWWK+GRW +G+R RDE   RW+SL DLATE+ E VLGVLRRGTV EVLRVQIS V   S PWS Q
Sbjct:   38 CSRFWRELCFSDCIWESLVRNRWPLLSSFHFPSSSTHSPNFKKWRKLYLERQVELGLRARSVVKFLEACSRSESLEVGDYLKAVDTLIGTMFGFEDVQRFLFNPQMNVLINLVGLHYCLTTLGIPGDNLVEALRTHEISDRRVCIKWWKVGRWYYGFRMRDESHSRWVSLADLATEDDEHVLGVLRRGTVHEVLRVQISVVGRPSTPWSCQ 248          
BLAST of GT622496 vs. TrEMBL
Match: B9HMP2_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTRDRAFT_657688 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.577e-52
Identity = 102/202 (50.50%), Postives = 130/202 (64.36%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLLHSSPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAFEIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVDHKSIPW 607
            CS+ WR  C SDSIW SL   RWP LHSS   PN K  + +Y   H +    A     F++ CS +ES++V DY +A E ++  +  FED+Q FLFKP++NVL+NLVG+HYC+  L +P D ++  L  C I  R V VKWWKLGRW +G+R RDE    W+SLEDL T +GE VLGVLRRG V EV RV+IS  +  S  W
Sbjct:   35 CSQFWRDSCGSDSIWESLTKQRWPSLHSSSFDPNTKGWKEIYIRMHREKAGSAAEVVGFVEQCSLSESIDVGDYQKAIEDLSSMQLSFEDVQMFLFKPKLNVLLNLVGLHYCIFCLEMPADRVMDTLVGCNILERKVHVKWWKLGRWFYGFRMRDESCSCWVSLEDLLTGKGEEVLGVLRRGAVHEVFRVEISISNPTSTSW 236          
BLAST of GT622496 vs. TrEMBL
Match: B9RT01_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0679750 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.831e-46
Identity = 94/201 (46.77%), Postives = 131/201 (65.17%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLLHSSPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAFEIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVDHKSIP 604
            CS+ WR++C SD IW SL   RWP L S   +P  K  R +Y   H ++  +A S   F++ CS +ESLEV +Y +A E ++  +  F DIQ FLFKP+++VL+NLVG+HYC+  L +P + L+  +  C+IS R VCVKWWKLGRW++G+R RDE   R +SL DL T++GE VLGVLRRG + E   V+     + + P
Sbjct:   35 CSRFWRELCGSDCIWESLTRERWPSL-SFLNNPISKDWREIYIRTHKEMEGKATSVIVFVEHCSLSESLEVGEYYKAIEDLDSMQISFRDIQMFLFKPKLSVLLNLVGLHYCIFCLKVPAEHLMDAILFCKISERLVCVKWWKLGRWLYGFRMRDESHSRKVSLADLVTDKGEEVLGVLRRGAIHENSWVEFDICSNPNPP 234          
BLAST of GT622496 vs. TrEMBL
Match: B9RT00_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0679740 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.116e-44
Identity = 89/213 (41.78%), Postives = 130/213 (61.03%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLLH--------SSPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAFEIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVDHKSIPWSYQ 616
            CS+LWR++C SD +W SL   RWP +         SS   P  K  R +Y   H ++  +A +   F++  S  +SLEV +Y +A + +   +  F D+Q FLFKP +NVL+NLVG+HYC+  L +P + ++  L +C++S R VCVKWWK+GRW  G+   +E   R +SL DL TE+GE +L VL RG + EVLR++IS  +  + P S Q
Sbjct:   36 CSRLWRELCRSDCLWESLTKQRWPSVSLPFLCNSSSSTTDPLVKGWREIYVRLHEEMAGKATALVEFVEHSSPYDSLEVGEYYKALQDLYSMQLAFTDVQMFLFKPRLNVLLNLVGLHYCIFGLKVPAEHVMDALLSCKVSERQVCVKWWKIGRWFFGFHMTEEPHSRTVSLADLTTEKGEEILKVLHRGAIHEVLRIEISISNAATTPGSCQ 248          
BLAST of GT622496 vs. TrEMBL
Match: D7T6I9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017799001 PE=4 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.506e-42
Identity = 92/211 (43.60%), Postives = 134/211 (63.51%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLL------HSSPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAFEIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVDHKSIPWSYQ 616
            CS+ WR++  SD IW  L  +RW +        +S L P  +  +  Y + H ++  RA    RF+++ S +ESLEV D+L+A   +   + GF+D+Q FLFKP++NVL+NLVG+ YC+  L +P + +++ +++C+IS R VCVKWWKLGRW +G+R RDE   R +SL D+A E+   VL VL RG + EVLRVQIS     +  WS Q
Sbjct:  614 CSRSWRELWGSDPIWERLCRDRWSVQCMLGESSASELHPPKEGWKSFYIKWHHEMAGRATDVVRFVESRSSSESLEVGDHLKAIVGLRDRQLGFKDVQIFLFKPKLNVLINLVGLQYCIQWLKVPAEHVMEAIQSCKISERQVCVKWWKLGRWFYGFRLRDESHCRRVSLRDVAKEDE--VLWVLHRGAIHEVLRVQISIPSPSTTSWSCQ 822          
BLAST of GT622496 vs. TrEMBL
Match: A9TGM3_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_145308 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 8.285e-33
Identity = 74/206 (35.92%), Postives = 113/206 (54.85%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLLHSSPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAFEIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVDHKSIPWSYQD 619
            CS+ W  +C SD +W  L   RW  L+        +     Y   H+++R RA +    +KA + +ES+EV DY +   +++       D+  FLF    +VL+NL+G+HYCL +LG     L + L   ++  R VC++WW +G W +G+R RDE+  R  S+ +L   E   +  +L RGT+ EVLRVQISA D +S  W  +D
Sbjct:   51 CSRYWHAICSSDVVWFHLFHKRWAGLYGQRFLQGWQAA---YRNSHVEMRKRARAVVELIKARTRHESVEVADYQKGLMMLSTTGLALYDVFLFLFTSAQSVLVNLIGLHYCLFHLGAQLKELKEFLARSKVGERKVCLRWWSMGGWANGFRRRDEMQIRMASIANLTEPESVPLFQILDRGTLHEVLRVQISA-DFESSAWVQRD 252          
BLAST of GT622496 vs. TrEMBL
Match: Q6I5Q2_ORYSJ (Os05g0372800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0025P09.9 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.258e-29
Identity = 71/205 (34.63%), Postives = 110/205 (53.66%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLLHSS--------PLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAF-EIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVD 589
            CS+ WR+ C +D +W +L   RWPL  ++          +   +  + LY   H    +       F++    N SLE + YL+A   + +    GF D Q FL     + +MNL+G+HY +++L IP + + + L+A ++  R VCV  +KLGRW +G+R  DE     ISL +L   EG  +L +L+RG V EV R+Q+S VD
Sbjct:   42 CSRSWRRACDADCVWEALFRRRWPLAAAAGGGGGGEGEGASGVQGWKALYINHHRRTAVAISGVAEFVENNLRNGSLEAEYYLKAIANLASMRDIGFIDAQFFLLSRNYSAIMNLIGLHYSISSLNIPPNEVYKALQARKVEERKVCVSLYKLGRWFYGFRLPDESESHEISLSELTMSEGATILAILKRGAVHEVFRLQVSLVD 246          
BLAST of GT622496 vs. TrEMBL
Match: B6T548_MAIZE (F-box domain containing protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.112e-28
Identity = 73/199 (36.68%), Postives = 110/199 (55.28%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWP--LLHSSPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAF-EIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVD 589
            CS+ WR+ C +D IW  L   RWP  +  +S  S   +  + LY  +H  +     +   F+    +N SLE + YL+A  ++      GF D+Q FLF    + ++NL+G+HY + +L +    + + L+A  +S R VCV   KLGRW +G+R  DE   R ISL +L T EG  +L +L RG V EV R++IS V+
Sbjct:   35 CSRTWRRACDADCIWERLFRCRWPAAVAEASASSSRMQGWKALYISQHRRMAAAISNVVEFVGGSLNNGSLESEYYLKAIADLAMILDIGFLDVQFFLFSRNHSAIINLIGLHYSIASLHVLPAEVSKALQAHSVSERMVCVNLLKLGRWFYGFRLPDEYESRKISLGELTTAEGAEILAILNRGAVHEVFRLRISLVN 233          
BLAST of GT622496 vs. TrEMBL
Match: C0PB84_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.145e-28
Identity = 72/199 (36.18%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWP--LLHSSPLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAF-EIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVD 589
            CS+ WR+ C +D IW  L   RWP  +  +S  S   +  + LY  +H  +     +   F+    +N SLE + YL+A  ++      GF D+Q FLF    + ++NL+G+HY + +L +    + + L+A  +S R VCV   KLGRW +G+R  DE   R ISL +L T EG  +L +L RG V EV R++I  V+
Sbjct:   35 CSRTWRRACDADCIWERLFRCRWPAAVAEASASSSRMQGWKALYISQHRRMAAAISNVVEFVGGSLNNGSLESEYYLKAIADLAMILDIGFLDVQFFLFSRNHSAIINLIGLHYSIASLHVLPAEVSKALQAHRVSERMVCVNLLKLGRWFYGFRLPDEYESRKISLGELTTAEGAEILAILNRGAVHEVFRLRIGLVN 233          
BLAST of GT622496 vs. TrEMBL
Match: A2Y3Y5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19715 PE=4 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.335e-27
Identity = 68/200 (34.00%), Postives = 106/200 (53.00%), Query Frame = 2
Query:    2 CSKLWRQVCFSDSIWNSLLTNRWPLLHSS--------PLSPNHKTCRRLYFERHIDLRLRAESAERFLKACSHNESLEVDDYLQAF-EIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQ 574
            CS+ WR+ C +D +W +L   RWPL  ++          +   +  + LY   H    +       F++    N SLE + YL+A   + +    GF D Q FL     + +MNL+G+HY +++L IP + + + L+A ++  R VCV  +KLGRW +G+R  DE     ISL +L   EG  +L +L+RG V EV R+Q
Sbjct:   42 CSRSWRRACDADCVWEALFRRRWPLAAAAGGGGGGEGEGASGVQGWKALYINHHRRTAVAISGVAEFVENNLRNGSLEAEYYLKAIANLASMRDIGFIDAQFFLLSRNYSAIMNLIGLHYSISSLNIPPNEVYKALQARKVEERKVCVSLYKLGRWFYGFRLPDESESHEISLSELTMSEGATILAILKRGAVHEVFRLQ 241          
BLAST of GT622496 vs. TAIR peptide
Match: AT4G15563.1 (| Symbols: | unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:8891771-8892348 FORWARD LENGTH=167)

HSP 1 Score: 126.331 bits (316), Expect = 1.949e-29
Identity = 69/159 (43.40%), Postives = 97/159 (61.01%), Query Frame = 2
Query:  134 RHIDLRLRAESAERFLKACSHNESLEVDDYLQAFEIVNCARFGFEDIQRFLFKPEMNVLMNLVGVHYCLTNLGIPGDSLVQGLRACEISNRHVCVKWWKLGRWVHGYRGRDELLFRWISLEDLATEEGECVLGVLRRGTVLEVLRVQISAVDHKSIPWS 610
            +H ++  RA    +++       SLE   YL A E ++  RFGF+D++ F FKP ++VL+NL+G+ YC+ +L    + +V  LR C IS + V VKW  LGRW  G R RD+++ R +SL D+ T + E VL VL+RG V EVLRV IS VD    P S
Sbjct:    2 QHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVLLNLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVSLVDVVTGKEETVLRVLQRGVVHEVLRVCISTVDLACAPCS 160          
The following BLAST results are available for this feature:
BLAST of GT622496 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TCL9_SOYBN3.112e-7263.51Putative uncharacterized protein OS=Glycine max PE... [more]
B9HMP2_POPTR3.577e-5250.50F-box family protein OS=Populus trichocarpa GN=POP... [more]
B9RT01_RICCO3.831e-4646.77Putative uncharacterized protein OS=Ricinus commun... [more]
B9RT00_RICCO6.116e-4441.78Putative uncharacterized protein OS=Ricinus commun... [more]
D7T6I9_VITVI1.506e-4243.60Whole genome shotgun sequence of line PN40024, sca... [more]
A9TGM3_PHYPA8.285e-3335.92Predicted protein OS=Physcomitrella patens subsp. ... [more]
Q6I5Q2_ORYSJ3.258e-2934.63Os05g0372800 protein OS=Oryza sativa subsp. japoni... [more]
B6T548_MAIZE2.112e-2836.68F-box domain containing protein OS=Zea mays PE=2 S... [more]
C0PB84_MAIZE6.145e-2836.18Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
A2Y3Y5_ORYSI2.335e-2734.00Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GT622496 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G15563.11.949e-2943.40| Symbols: | unknown protein; Has 36 Blast hits t... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 46..61
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT622496 ID=GT622496; Name=GT622496; organism=Lens culinaris; type=EST; length=811bp
CTGTTCCAAGTTGTGGAGACAAGTCTGCTTCTCTGATTCCATTTGGAATT
CTCTTCTCACTAACAGATGGCCCTTACTCCATAGTTCACCTCTCTCTCCC
AATCACAAGACATGTAGAAGATTGTATTTCGAGAGGCACATTGATTTGAG
ACTTAGAGCAGAGTCTGCGGAGAGGTTTTTGAAAGCCTGTTCGCATAATG
AATCACTTGAGGTTGACGACTATCTGCAAGCCTTTGAAATTGTTAATTGT
GCAAGGTTTGGTTTTGAAGATATCCAAAGGTTTTTGTTTAAACCTGAAAT
GAATGTGTTGATGAATTTGGTTGGTGTGCATTATTGCTTAACAAACCTCG
GGATTCCGGGTGATAGTCTTGTACAAGGCCTTCGGGCTTGTGAGATCTCA
AATCGGCATGTATGTGTCAAATGGTGGAAACTTGGTAGGTGGGTCCATGG
ATACCGAGGTAGAGATGAGTTACTTTTTCGTTGGATTTCTTTGGAAGATT
TGGCAACAGAAGAGGGTGAGTGTGTTTTGGGAGTGCTTCGTCGAGGCACT
GTTCTTGAGGTTTTACGTGTTCAGATCTCAGCTGTTGATCATAAATCAAT
ACCTTGGTCCTATCAGGATAACCAGTGATTGGAATAGCTGCAGGGAAATC
AACTAAAAATGTGTATAATTATAGTATGTGTCAATATTTTTCAGCATGAG
TATGTGTATAATTGGTTTATAAAATTCTGCAGTAATGTTACCTGTGTTGT
ATGTCAATAAAAACAGGACTGTAATAAATAATAATGCTTATTATCTTCTT
CACAGTTTAAA
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