GT618631

EST Overview


Name	GT618631
Unique Name	GT618631
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	768

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT618631 vs. TrEMBL
Match: B9RVV6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1173300 PE=4 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.405e-55
Identity = 99/159 (62.26%), Postives = 113/159 (71.07%), Query Frame = 1

Query:  133 NIPPRKLLTRRQPTNTSADMFSEE-------------------------------DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +IPPRKLL+++    +S DM S                                 DPYSSDHFRMYEFK+RRCTRSRSHDWTDCPFAHPGEKA RRDP +Y YSG +CP++RRG C RGD+CEF+HGVFE WLHPSRYRTEACKDGKNCKRK+CFFAH+
Sbjct:   28 DIPPRKLLSKKTFQESSPDMLSSPFESHLHKFLPCNDLISSDNNHDQRGSDDQDLDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKALRRDPRKYHYSGAICPEFRRGGCSRGDSCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHS 186

[Close]

BLAST of GT618631 vs. TrEMBL
Match: B9HGP6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763739 PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 9.138e-55
Identity = 99/148 (66.89%), Postives = 109/148 (73.65%), Query Frame = 1

Query:  136 IPPRKLLTRR---------------------QPTNTSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            IPPRKLLTR+                       +N   D+  E DPYSSDHFRMYEFK+RRCTRSRSHDWTDCPFAHPGEKARRRD  R+ YSG VCP++ RG C RGD CEF+HGVFE WLHP RYRTEACKDGKNCKRK+CFFAH+
Sbjct:   30 IPPRKLLTRKTHQETLDVSPYETDLQEFLPYNDSNNEIDIDDELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDLRRFHYSGAVCPEFIRGGCNRGDNCEFAHGVFECWLHPFRYRTEACKDGKNCKRKVCFFAHS 177

[Close]

BLAST of GT618631 vs. TrEMBL
Match: B9MYF5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827173 PE=4 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.472e-54
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 1

Query:  127 IDNIPPRKLLTRRQPTNTSAD---MFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +D  P    L R  P N  ++   +  E DPYSSDHFRMYEFK+RRCTRSRSHDWTDCPFAHPGEKARRRDP R+ YSG VCP+++RG C RG+ CEFSHGVFE WLHPSRYRTEACKDGKNCKRK+CFFAH+
Sbjct:   44 LDMSPYETNLQRFLPYNDYSNEKVLDGELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGIVCPEFKRGGCSRGENCEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHS 176

[Close]

BLAST of GT618631 vs. TrEMBL
Match: D7MMK2_ARALY (Zinc finger (CCCH-type) family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494567 PE=4 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.549e-53
Identity = 95/143 (66.43%), Postives = 114/143 (79.72%), Query Frame = 1

Query:  133 NIPPRKLLTR-RQPTNTSADMFS------------EEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRR--GNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +IPPRKLL+  + P++ S+ + +             EDPY+ DHFRMYEFKIRRCTRSRSHDWTDCPF+HPGEKARRRDP R+ Y+GEVCP++ R  G+C RGD C F+HGVFE WLHPSRYRTEACKDGK+CKRK+CFFAH+
Sbjct:   17 DIPPRKLLSSAKSPSSVSSPLRNYKEQKDYCYDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHS 159

[Close]

BLAST of GT618631 vs. TrEMBL
Match: D7KD80_ARALY (Zinc finger (CCCH-type) family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470353 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.117e-52
Identity = 89/106 (83.96%), Postives = 100/106 (94.34%), Query Frame = 1

Query:  202 EDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRR-GNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +DPY+SDHFRM+EFKIRRCTRSRSHDWTDCPFAHPGEKARRRDP R+QYSGEVCP++RR G+C RGD CEF+HGVFE WLHP RYRTEACKDGK+CKRK+CFFAH+
Sbjct:   78 DDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHS 183

[Close]

BLAST of GT618631 vs. TrEMBL
Match: Q5D6A7_GOSHI (Putative CCCH-type zinc finger transcription factor OS=Gossypium hirsutum GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.250e-52
Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 1

Query:  169 PTNTSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRR-GNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            P+N   D    +DPY +DHFRMYEFK+RRCTRSRSHDWTDCPFAHPGEKARRRDP RYQYS  +C D+RR G C RGD CEF+HGVFE WLHP+RYRTEACKDGKNCKRK+CFFAH+
Sbjct:   53 PSNEDDD--GTDDPYGTDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPTRYQYSSTICSDFRRGGGCPRGDDCEFAHGVFECWLHPTRYRTEACKDGKNCKRKVCFFAHS 167

[Close]

BLAST of GT618631 vs. TrEMBL
Match: B8LMK4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 5.737e-49
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 1

Query:  205 DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D YS D FRMYEFK+RRC R RSHDWT+CPFAHPGEKARRRDP R+ YSG  CPD+R+G+C RGDACEF+HGVFE WLHP+RYRT+ CKDG+NC+R++CFFAHT
Sbjct:  150 DAYSCDEFRMYEFKVRRCMRGRSHDWTECPFAHPGEKARRRDPRRFHYSGTACPDFRKGSCRRGDACEFAHGVFECWLHPARYRTQPCKDGRNCRRRVCFFAHT 253

[Close]

BLAST of GT618631 vs. TrEMBL
Match: D7TBD3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015265001 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.669e-48
Identity = 76/104 (73.08%), Postives = 93/104 (89.42%), Query Frame = 1

Query:  205 DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D YS DHFRM+EFK+RRC R RSHDWT+CP+AHPGEKARRRDP ++ YSG  CPD+R+GNC++GD+CEF+HGVFE WLHP+RYRT+ CKDG NC+R++CFFAHT
Sbjct:   70 DAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGPNCRRRVCFFAHT 173

[Close]

BLAST of GT618631 vs. TrEMBL
Match: A9T7A9_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_141405 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.669e-48
Identity = 79/114 (69.30%), Postives = 94/114 (82.46%), Query Frame = 1

Query:  175 NTSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            N   + +   D Y  D FRM+EFK+RRC R RSHDWT+CPFAHPGEKARRRDP RY YSG  CPD+R+G+C RGDACEF+HGVFE WLHP+RYRT+ CKDG+NC+R++CFFAHT
Sbjct:   19 NEDEEAWPVVDMYGCDQFRMFEFKVRRCMRGRSHDWTECPFAHPGEKARRRDPRRYHYSGTACPDFRKGSCRRGDACEFAHGVFECWLHPARYRTQPCKDGRNCRRRVCFFAHT 132

[Close]

BLAST of GT618631 vs. TrEMBL
Match: A5C465_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013303 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.669e-48
Identity = 76/104 (73.08%), Postives = 93/104 (89.42%), Query Frame = 1

Query:  205 DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D YS DHFRM+EFK+RRC R RSHDWT+CP+AHPGEKARRRDP ++ YSG  CPD+R+GNC++GD+CEF+HGVFE WLHP+RYRT+ CKDG NC+R++CFFAHT
Sbjct:  132 DAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGPNCRRRVCFFAHT 235

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H61_ARATH (Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana GN=At5g44260 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.506e-54
Identity = 95/142 (66.90%), Postives = 113/142 (79.58%), Query Frame = 1

Query:  133 NIPPRKLLTR-RQPTNTSADM------------FSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDY-RRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +IPPRKLL+  + P++ S+ +               EDPY+ DHFRMYEFKIRRCTRSRSHDWTDCPF+HPGEKARRRDP R+ Y+GEVCP++ R G+C RGD C F+HGVFE WLHPSRYRTEACKDGK+CKRK+CFFAH+
Sbjct:   17 DIPPRKLLSSAKSPSSVSSPLRDYKEQKDYCYDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHS 158

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H2_ARATH (Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana GN=At1g03790 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.291e-54
Identity = 89/106 (83.96%), Postives = 100/106 (94.34%), Query Frame = 1

Query:  202 EDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRR-GNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +DPY+SDHFRM+EFKIRRCTRSRSHDWTDCPFAHPGEKARRRDP R+QYSGEVCP++RR G+C RGD CEF+HGVFE WLHP RYRTEACKDGK+CKRK+CFFAH+
Sbjct:   75 DDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHS 180

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H23_ARATH (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.170e-49
Identity = 81/125 (64.80%), Postives = 99/125 (79.20%), Query Frame = 1

Query:  142 PRKLLTRRQPTNTSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            P   LT    +++  +     D +SSD FR+YEFKIRRC R RSHDWT+CPFAHPGEKARRRDP ++ YSG  CP++R+G+C RGD+CEFSHGVFE WLHPSRYRT+ CKDG +C+R+ICFFAHT
Sbjct:   63 PSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHT 187

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.140e-49
Identity = 80/129 (62.02%), Postives = 98/129 (75.97%), Query Frame = 1

Query:  130 DNIPPRKLLTRRQPTNTSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D +P   +         +A M +  D Y+ D FRMYEFK+RRC R RSHDWT+CPFAHPGEKARRRDP +Y YSG  CPD+R+G C+RGDACE++HGVFE WLHP+RYRT+ CKDG  C+R++CFFAHT
Sbjct:   45 DYLPANDVGVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHT 173

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.407e-49
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 1

Query:  205 DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D YS DHFRMY+FK+RRC R RSHDWT+CP+AHPGEKARRRDP +Y YSG  CPD+R+G C++GD+CEF+HGVFE WLHP+RYRT+ CKDG NC RKICFFAH+
Sbjct:   73 DAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHS 176

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H35_ORYSJ (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.407e-49
Identity = 83/125 (66.40%), Postives = 97/125 (77.60%), Query Frame = 1

Query:  169 PTNTSADMFSEE---------DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            P+N +A    EE         D Y+ D FRMYEFK+RRC R RSHDWT+CPFAHPGEKARRRDP RY YSG  CPD+R+G C+RGDACEF+HGVFE WLHP+RYRT+ CKDG  C+R++CFFAHT
Sbjct:   50 PSNEAAAAEDEEEAAAVAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHT 174

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.223e-49
Identity = 76/104 (73.08%), Postives = 92/104 (88.46%), Query Frame = 1

Query:  205 DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D Y+ DHFRMYEFK+RRC R RSHDWT+CP+AHPGEKARRRDP ++ YSG  CP++R+G C+RGDACEFSHGVFE WLHP+RYRT+ CKDG NC+R++CFFAH+
Sbjct:   72 DAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHS 175

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.685e-42
Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = 1

Query:  211 YSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            Y+SD FRMY FKIR C+R+ SHDWT+CPF HPGE ARRRDP +Y YS   CPD+R+G C RGD CE++HGVFE WLHP++YRT  CKDG +C R++CFFAHT
Sbjct:  277 YASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHT 378

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.863e-41
Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 1

Query:  211 YSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            Y++D FRMY FK+R C+R+ SHDWT+CPF HPGE ARRRDP ++ YS   CPD+R+G C RGD CE++HGVFE WLHP++YRT  CKDG  C R++CFFAHT
Sbjct:  257 YATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHT 358

[Close]

BLAST of GT618631 vs. SwissProt
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.079e-41
Identity = 70/126 (55.56%), Postives = 91/126 (72.22%), Query Frame = 1

Query:  139 PPRKLLTRRQPTN-TSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAH 513
            PPR    +  P + T  D+  +   Y +D FRMY FKI+ C+R+ SHDWT+CPF HPGE ARRRDP +Y YS   CP++R+G+C RGD CE++HG+FE WLHP++YRT  CKD  NC R++CFFAH
Sbjct:  182 PPRGSERKEYPVDPTLPDI--KNGVYGTDEFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSRGDTCEYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAH 305

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT5G44260.1 (| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr5:17829974-17831119 REVERSE LENGTH=381)

HSP 1 Score: 212.231 bits (539), Expect = 2.504e-55
Identity = 95/142 (66.90%), Postives = 113/142 (79.58%), Query Frame = 1

Query:  133 NIPPRKLLTR-RQPTNTSADM------------FSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDY-RRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +IPPRKLL+  + P++ S+ +               EDPY+ DHFRMYEFKIRRCTRSRSHDWTDCPF+HPGEKARRRDP R+ Y+GEVCP++ R G+C RGD C F+HGVFE WLHPSRYRTEACKDGK+CKRK+CFFAH+
Sbjct:   17 DIPPRKLLSSAKSPSSVSSPLRDYKEQKDYCYDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHS 158

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT1G03790.1 (| Symbols: SOM | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:954589-955770 FORWARD LENGTH=393)

HSP 1 Score: 210.69 bits (535), Expect = 7.284e-55
Identity = 89/106 (83.96%), Postives = 100/106 (94.34%), Query Frame = 1

Query:  202 EDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRR-GNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            +DPY+SDHFRM+EFKIRRCTRSRSHDWTDCPFAHPGEKARRRDP R+QYSGEVCP++RR G+C RGD CEF+HGVFE WLHP RYRTEACKDGK+CKRK+CFFAH+
Sbjct:   75 DDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHS 180

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT2G25900.2 (| Symbols: ATCTH | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:11041817-11042764 FORWARD LENGTH=315)

HSP 1 Score: 195.282 bits (495), Expect = 3.167e-50
Identity = 81/125 (64.80%), Postives = 99/125 (79.20%), Query Frame = 1

Query:  142 PRKLLTRRQPTNTSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            P   LT    +++  +     D +SSD FR+YEFKIRRC R RSHDWT+CPFAHPGEKARRRDP ++ YSG  CP++R+G+C RGD+CEFSHGVFE WLHPSRYRT+ CKDG +C+R+ICFFAHT
Sbjct:   63 PSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHT 187

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT2G25900.1 (| Symbols: ATCTH, ATTZF1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:11041817-11042764 FORWARD LENGTH=315)

HSP 1 Score: 195.282 bits (495), Expect = 3.167e-50
Identity = 81/125 (64.80%), Postives = 99/125 (79.20%), Query Frame = 1

Query:  142 PRKLLTRRQPTNTSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            P   LT    +++  +     D +SSD FR+YEFKIRRC R RSHDWT+CPFAHPGEKARRRDP ++ YSG  CP++R+G+C RGD+CEFSHGVFE WLHPSRYRT+ CKDG +C+R+ICFFAHT
Sbjct:   63 PSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHT 187

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT4G29190.1 (| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr4:14392233-14393303 REVERSE LENGTH=356)

HSP 1 Score: 194.512 bits (493), Expect = 5.402e-50
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 1

Query:  205 DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D YS DHFRMY+FK+RRC R RSHDWT+CP+AHPGEKARRRDP +Y YSG  CPD+R+G C++GD+CEF+HGVFE WLHP+RYRT+ CKDG NC RKICFFAH+
Sbjct:   73 DAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHS 176

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT2G19810.1 (| Symbols: | CCCH-type zinc finger family protein | chr2:8550419-8551498 FORWARD LENGTH=359)

HSP 1 Score: 193.741 bits (491), Expect = 9.215e-50
Identity = 76/104 (73.08%), Postives = 92/104 (88.46%), Query Frame = 1

Query:  205 DPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            D Y+ DHFRMYEFK+RRC R RSHDWT+CP+AHPGEKARRRDP ++ YSG  CP++R+G C+RGDACEFSHGVFE WLHP+RYRT+ CKDG NC+R++CFFAH+
Sbjct:   72 DAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHS 175

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT2G41900.1 (| Symbols: | CCCH-type zinc finger protein with ARM repeat domain | chr2:17491352-17493502 FORWARD LENGTH=716)

HSP 1 Score: 169.474 bits (428), Expect = 1.861e-42
Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 1

Query:  211 YSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAHT 516
            Y++D FRMY FK+R C+R+ SHDWT+CPF HPGE ARRRDP ++ YS   CPD+R+G C RGD CE++HGVFE WLHP++YRT  CKDG  C R++CFFAHT
Sbjct:  257 YATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHT 358

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT5G58620.1 (| Symbols: | zinc finger (CCCH-type) family protein | chr5:23693959-23695782 FORWARD LENGTH=607)

HSP 1 Score: 167.548 bits (423), Expect = 7.072e-42
Identity = 70/126 (55.56%), Postives = 91/126 (72.22%), Query Frame = 1

Query:  139 PPRKLLTRRQPTN-TSADMFSEEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAH 513
            PPR    +  P + T  D+  +   Y +D FRMY FKI+ C+R+ SHDWT+CPF HPGE ARRRDP +Y YS   CP++R+G+C RGD CE++HG+FE WLHP++YRT  CKD  NC R++CFFAH
Sbjct:  182 PPRGSERKEYPVDPTLPDI--KNGVYGTDEFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSRGDTCEYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAH 305

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT5G12850.1 (| Symbols: | CCCH-type zinc finger protein with ARM repeat domain | chr5:4057068-4059188 FORWARD LENGTH=706)

HSP 1 Score: 167.162 bits (422), Expect = 9.236e-42
Identity = 64/101 (63.37%), Postives = 84/101 (83.17%), Query Frame = 1

Query:  211 YSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAH 513
            YS+D FRM+ FKIR C+R+ SHDWT+CPFAHPGE ARRRDP ++ Y+   CPD+++G+C++GD CE++HGVFE WLHP++YRT  CKDG  C R++CFFAH
Sbjct:  253 YSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPCPDFKKGSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAH 353

[Close]

BLAST of GT618631 vs. TAIR peptide
Match: AT5G07500.1 (| Symbols: PEI1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr5:2372716-2373453 FORWARD LENGTH=245)

HSP 1 Score: 166.777 bits (421), Expect = 1.206e-41
Identity = 68/101 (67.33%), Postives = 79/101 (78.22%), Query Frame = 1

Query:  211 YSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCERGDACEFSHGVFESWLHPSRYRTEACKDGKNCKRKICFFAH 513
            Y SD FRMY +KI+RC R+RSHDWT+CP+AH GEKA RRDP RY Y    CP +R G C RGD+CEF+HGVFE WLHP+RYRT AC  G  C+RK+CFFAH
Sbjct:   48 YGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRNGACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAH 148

The following BLAST results are available for this feature:

BLAST of GT618631 vs. TrEMBL
BLAST of GT618631 vs. SwissProt
BLAST of GT618631 vs. TAIR peptide

BLAST of GT618631 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RVV6_RICCO	2.405e-55	62.26	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9HGP6_POPTR	9.138e-55	66.89	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9MYF5_POPTR	3.472e-54	72.18	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7MMK2_ARALY	6.549e-53	66.43	Zinc finger (CCCH-type) family protein OS=Arabidop...	[more]
D7KD80_ARALY	1.117e-52	83.96	Zinc finger (CCCH-type) family protein OS=Arabidop...	[more]
Q5D6A7_GOSHI	3.250e-52	76.92	Putative CCCH-type zinc finger transcription facto...	[more]
B8LMK4_PICSI	5.737e-49	75.96	Putative uncharacterized protein OS=Picea sitchens...	[more]
D7TBD3_VITVI	1.669e-48	73.08	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9T7A9_PHYPA	1.669e-48	69.30	Predicted protein (Fragment) OS=Physcomitrella pat...	[more]
A5C465_VITVI	1.669e-48	73.08	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of GT618631 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
C3H61_ARATH	2.506e-54	66.90	Zinc finger CCCH domain-containing protein 61 OS=A...	[more]
C3H2_ARATH	7.291e-54	83.96	Zinc finger CCCH domain-containing protein 2 OS=Ar...	[more]
C3H23_ARATH	3.170e-49	64.80	Zinc finger CCCH domain-containing protein 23 OS=A...	[more]
C3H2_ORYSJ	4.140e-49	62.02	Zinc finger CCCH domain-containing protein 2 OS=Or...	[more]
C3H49_ARATH	5.407e-49	74.04	Zinc finger CCCH domain-containing protein 49 OS=A...	[more]
C3H35_ORYSJ	5.407e-49	66.40	Zinc finger CCCH domain-containing protein 35 OS=O...	[more]
C3H20_ARATH	9.223e-49	73.08	Zinc finger CCCH domain-containing protein 20 OS=A...	[more]
C3H24_ORYSJ	1.685e-42	67.65	Zinc finger CCCH domain-containing protein 24 OS=O...	[more]
C3H30_ARATH	1.863e-41	64.71	Zinc finger CCCH domain-containing protein 30 OS=A...	[more]
C3H66_ARATH	7.079e-41	55.56	Zinc finger CCCH domain-containing protein 66 OS=A...	[more]

BLAST of GT618631 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G44260.1	2.504e-55	66.90	\| Symbols: \| Zinc finger C-x8-C-x5-C-x3-H type fa...	[more]
AT1G03790.1	7.284e-55	83.96	\| Symbols: SOM \| Zinc finger C-x8-C-x5-C-x3-H type...	[more]
AT2G25900.2	3.167e-50	64.80	\| Symbols: ATCTH \| Zinc finger C-x8-C-x5-C-x3-H ty...	[more]
AT2G25900.1	3.167e-50	64.80	\| Symbols: ATCTH, ATTZF1 \| Zinc finger C-x8-C-x5-C...	[more]
AT4G29190.1	5.402e-50	74.04	\| Symbols: \| Zinc finger C-x8-C-x5-C-x3-H type fa...	[more]
AT2G19810.1	9.215e-50	73.08	\| Symbols: \| CCCH-type zinc finger family protein...	[more]
AT2G41900.1	1.861e-42	64.71	\| Symbols: \| CCCH-type zinc finger protein with A...	[more]
AT5G58620.1	7.072e-42	55.56	\| Symbols: \| zinc finger (CCCH-type) family prote...	[more]
AT5G12850.1	9.236e-42	63.37	\| Symbols: \| CCCH-type zinc finger protein with A...	[more]
AT5G07500.1	1.206e-41	67.33	\| Symbols: PEI1 \| Zinc finger C-x8-C-x5-C-x3-H typ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 105..127 score: 1.1
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	no description	coord: 102..128 score: 1.3e-06coord: 137..160 score:
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 102..129 score: 14.399coord: 137..161 score: 6
None	No IPR available	GENE3D	4.10.1000.10	no description	coord: 103..130 score: 6.4
None	No IPR available	PANTHER	PTHR14493	UNCHARACTERIZED	coord: 84..158 score: 3.1
None	No IPR available	SEG	seg	seg	coord: 14..23 score: NAcoord: 160..180 score: NAcoord: 183..200 score: NAcoord: 209..224 score
None	No IPR available	SUPERFAMILY	90229	CCCH zinc finger	coord: 97..130 score: 0.0
None	No IPR available	SEG	seg	seg	coord: 2..14 score: NAcoord: 19..25 score: NAcoord: 41..55 score: NAcoord: 83..95 score: NAcoord: 145..155 score: NAcoord: 159..176 score
None	No IPR available	SEG	seg	seg	coord: 75..88 score: NAcoord: 118..125 score: NAcoord: 146..152 score: NAcoord: 180..191 score
None	No IPR available	SEG	seg	seg	coord: 34..47 score: NAcoord: 75..90 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT618631 ID=GT618631; Name=GT618631; organism=Lens culinaris; type=EST; length=768bp
CACATCATATTTTCTTCTATCTAATTTATTATTTATTGAAGAAAAAAAAT
GAGTAGTGTACTTTGTGAGGAGCAACAAAAGCTTCTTCTCAATCTCAAAA
AATCTCTCATTATGAGAGACAACATTATCGACAACATCCCACCTAGGAAG
CTCCTCACCCGCCGACAACCCACCAACACCTCCGCCGACATGTTTTCCGA
GGAAGATCCTTATTCCTCCGACCACTTCCGCATGTACGAGTTCAAAATCC
GACGATGCACTCGCAGCCGCAGCCACGACTGGACCGACTGTCCCTTCGCT
CACCCTGGCGAAAAGGCTCGCCGTCGCGATCCTCTCCGGTATCAATACTC
CGGCGAGGTGTGCCCTGATTATCGCCGCGGAAACTGCGAACGCGGCGACG
CGTGTGAATTTTCCCACGGCGTTTTCGAAAGCTGGCTGCACCCTTCGAGA
TACAGAACTGAAGCTTGTAAAGATGGTAAGAATTGTAAGCGGAAAATTTG
CTTTTTTGCTCATACACCCCGTCAACTCAGGGTTTTGCTTTTGCCACCCC
CTCCTTCTCCCCCTCCTCAGAACAACGTTAAAAACTGTTGCTCTTTTTGT
CATTGCTGTTCTAATTCTTCTGCTTCATCACCCACTTCTACTTTGCTGAG
TGGGCCCTATTTTTCTTCTTCAAATTCACCACCTTTATCACCTTTGTCGA
ATTCAAATCCCAAAGATGTGCATGTTCTTAACGAGCTTATTCGATCTATG
GAGAGTTTCAATTTTTGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH

Search form