GT618958
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT618958 vs. TrEMBL
Match: A5ATE4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024907 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.160e-13 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 2 SKEGINIKQNSQKHSSSTRLSN--SSGPNSYLKPPLNKSHGSHGS-VRVNPVLNVPSANLFGLGSIFSNNRDKSKK 220 SK+G NIK N KH S + + SS SY KPPL K++GSH + VR+NPVLNVP+ +LFGLGSIFSN +DK K Sbjct: 174 SKDGNNIK-NWHKHPSVAPIKSPHSSSSTSYQKPPLKKTYGSHSNGVRINPVLNVPTPSLFGLGSIFSNGKDKINK 248
BLAST of GT618958 vs. TrEMBL
Match: B9N241_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580808 PE=4 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.981e-11 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 17 NIKQNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSHGS-VRVNPVLNVPSANLFGLGSIFSNNRDKSKKK 223 N KQN Q S S SS +Y KPPL K++G +G+ VRV+PVLNVPS NLFGLGSIF N +DK K Sbjct: 178 NHKQNKQAFFKS---SQSSSTKNYQKPPLKKNYGPYGNGVRVSPVLNVPSGNLFGLGSIFFNGKDKKNMK 244
BLAST of GT618958 vs. TrEMBL
Match: B9H306_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_800529 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.894e-11 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 29 NSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSHGS-VRVNPVLNVPSANLFGLGSIFSNNRDKSKKK 223 + Q S + S SS +Y KPPL K++G +G+ VRV+PVLNV S NLFGLGSIF N +DK+KKK Sbjct: 159 HKQHRQSFLKPSQSSSSTNYQKPPLKKNYGPYGNGVRVSPVLNVSSGNLFGLGSIFFNGKDKNKKK 224
BLAST of GT618958 vs. TrEMBL
Match: Q9FZH6_ARATH (F1O19.11 protein OS=Arabidopsis thaliana GN=At1g67050 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.790e-9 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFS-NNRDKSKKK 223 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N RDK+KK+ Sbjct: 190 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 264
BLAST of GT618958 vs. TrEMBL
Match: D7KUY5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475800 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.790e-9 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFS-NNRDKSKKK 223 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N RDK+KK+ Sbjct: 192 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 266
BLAST of GT618958 vs. TrEMBL
Match: B0FU35_ARALP (At1g67050-like protein (Fragment) OS=Arabidopsis lyrata subsp. petraea PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N Sbjct: 187 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 253
BLAST of GT618958 vs. TrEMBL
Match: B0FU34_ARALP (At1g67050-like protein (Fragment) OS=Arabidopsis lyrata subsp. petraea PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N Sbjct: 187 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 253
BLAST of GT618958 vs. TrEMBL
Match: B0FU32_ARATH (At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N Sbjct: 186 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 252
BLAST of GT618958 vs. TrEMBL
Match: B0FU30_ARATH (At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N Sbjct: 185 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 251
BLAST of GT618958 vs. TrEMBL
Match: B0FU29_ARATH (At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N Sbjct: 185 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 251
BLAST of GT618958 vs. TAIR peptide
Match: AT1G67050.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). | chr1:25028862-25029656 REVERSE LENGTH=264) HSP 1 Score: 66.2402 bits (160), Expect = 1.888e-11 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFS-NNRDKSKKK 223 Q S SSS+ S+S N + KPPL KS+G + G +RV+PV+N VPS NLFG GS+FS N RDK+KK+ Sbjct: 190 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 264 The following BLAST results are available for this feature:
BLAST of GT618958 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT618958 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT618958 ID=GT618958; Name=GT618958; organism=Lens culinaris; type=EST; length=696bpback to top |