GT618958

EST Overview
NameGT618958
Unique NameGT618958
TypeEST
OrganismLens culinaris (lentil)
Sequence length696
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT618958 vs. TrEMBL
Match: A5ATE4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024907 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.160e-13
Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 2
Query:    2 SKEGINIKQNSQKHSSSTRLSN--SSGPNSYLKPPLNKSHGSHGS-VRVNPVLNVPSANLFGLGSIFSNNRDKSKK 220
            SK+G NIK N  KH S   + +  SS   SY KPPL K++GSH + VR+NPVLNVP+ +LFGLGSIFSN +DK  K
Sbjct:  174 SKDGNNIK-NWHKHPSVAPIKSPHSSSSTSYQKPPLKKTYGSHSNGVRINPVLNVPTPSLFGLGSIFSNGKDKINK 248          
BLAST of GT618958 vs. TrEMBL
Match: B9N241_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580808 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.981e-11
Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 2
Query:   17 NIKQNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSHGS-VRVNPVLNVPSANLFGLGSIFSNNRDKSKKK 223
            N KQN Q    S   S SS   +Y KPPL K++G +G+ VRV+PVLNVPS NLFGLGSIF N +DK   K
Sbjct:  178 NHKQNKQAFFKS---SQSSSTKNYQKPPLKKNYGPYGNGVRVSPVLNVPSGNLFGLGSIFFNGKDKKNMK 244          
BLAST of GT618958 vs. TrEMBL
Match: B9H306_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_800529 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.894e-11
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2
Query:   29 NSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSHGS-VRVNPVLNVPSANLFGLGSIFSNNRDKSKKK 223
            + Q   S  + S SS   +Y KPPL K++G +G+ VRV+PVLNV S NLFGLGSIF N +DK+KKK
Sbjct:  159 HKQHRQSFLKPSQSSSSTNYQKPPLKKNYGPYGNGVRVSPVLNVSSGNLFGLGSIFFNGKDKNKKK 224          
BLAST of GT618958 vs. TrEMBL
Match: Q9FZH6_ARATH (F1O19.11 protein OS=Arabidopsis thaliana GN=At1g67050 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.790e-9
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFS-NNRDKSKKK 223
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N RDK+KK+
Sbjct:  190 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 264          
BLAST of GT618958 vs. TrEMBL
Match: D7KUY5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475800 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.790e-9
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFS-NNRDKSKKK 223
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N RDK+KK+
Sbjct:  192 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 266          
BLAST of GT618958 vs. TrEMBL
Match: B0FU35_ARALP (At1g67050-like protein (Fragment) OS=Arabidopsis lyrata subsp. petraea PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N
Sbjct:  187 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 253          
BLAST of GT618958 vs. TrEMBL
Match: B0FU34_ARALP (At1g67050-like protein (Fragment) OS=Arabidopsis lyrata subsp. petraea PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N
Sbjct:  187 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 253          
BLAST of GT618958 vs. TrEMBL
Match: B0FU32_ARATH (At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N
Sbjct:  186 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 252          
BLAST of GT618958 vs. TrEMBL
Match: B0FU30_ARATH (At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N
Sbjct:  185 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 251          
BLAST of GT618958 vs. TrEMBL
Match: B0FU29_ARATH (At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.612e-7
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFSNN 202
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N
Sbjct:  185 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGN 251          
BLAST of GT618958 vs. TAIR peptide
Match: AT1G67050.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). | chr1:25028862-25029656 REVERSE LENGTH=264)

HSP 1 Score: 66.2402 bits (160), Expect = 1.888e-11
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   26 QNSQKHSSSTRLSNSSGPNSYLKPPLNKSHGSH-------GSVRVNPVLN-VPSANLFGLGSIFS-NNRDKSKKK 223
            Q S   SSS+  S+S   N + KPPL KS+G +       G +RV+PV+N VPS NLFG GS+FS N RDK+KK+
Sbjct:  190 QQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 264          
The following BLAST results are available for this feature:
BLAST of GT618958 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5ATE4_VITVI4.160e-1357.89Putative uncharacterized protein OS=Vitis vinifera... [more]
B9N241_POPTR2.981e-1157.14Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9H306_POPTR3.894e-1156.06Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9FZH6_ARATH2.790e-950.67F1O19.11 protein OS=Arabidopsis thaliana GN=At1g67... [more]
D7KUY5_ARALY2.790e-950.67Putative uncharacterized protein OS=Arabidopsis ly... [more]
B0FU35_ARALP2.612e-749.25At1g67050-like protein (Fragment) OS=Arabidopsis l... [more]
B0FU34_ARALP2.612e-749.25At1g67050-like protein (Fragment) OS=Arabidopsis l... [more]
B0FU32_ARATH2.612e-749.25At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 ... [more]
B0FU30_ARATH2.612e-749.25At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 ... [more]
B0FU29_ARATH2.612e-749.25At1g67050 (Fragment) OS=Arabidopsis thaliana PE=4 ... [more]
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BLAST of GT618958 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G67050.11.888e-1150.67| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..23
score: NAcoord: 26..42
score
NoneNo IPR availableSEGsegsegcoord: 47..66
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT618958 ID=GT618958; Name=GT618958; organism=Lens culinaris; type=EST; length=696bp
GTCAAAAGAGGGTATTAATATTAAGCAAAATTCTCAGAAACATTCTTCTT
CAACAAGGCTTTCAAATTCATCTGGACCTAACAGTTATCTTAAACCTCCA
TTGAATAAGAGTCATGGATCTCATGGTAGTGTTAGAGTTAATCCTGTTCT
TAATGTTCCTTCTGCAAATTTATTTGGTTTGGGCTCAATCTTCTCCAACA
ATAGAGACAAGAGCAAGAAAAAGTAGCATTTTTTAGTATTAAATATGTTT
TGAATCCTTAAGTTTTATTATTGTCATTTTATGAGGATTAATGACATATT
TAATATAACTATATTGTTTCACTTATTTATGTGTGTAGTTTTTATTTAAG
AACTAGTTGGGTTTTACCATGTGATTAGAAAAAAAAGATACACGTTTGGA
AAGGTGAAGGGTTAGCATCAAGAAGGTAAAGAAGAGGTATGTGAAGGTGA
TGGACAAGAATGGCATAATGCAGGATTTGCACATGTTTTGATAGGGCACA
AAATGACAGGTAGATGTTGTTTTCATGGAGGTCCCTTGCTTGTGTTTTGG
TTTATTTGCTTTTGAAATTTGGTCTACTTGTAAATACATTGATTTTAATT
AGTTTCTTTTGTTTTTGTTTGTTTGGATCTCTCTTATTCTACACATGTAG
TACTTCGAGTCTCTTTTAAGAGGTTTAATGGAAAAACTTGATTGCA
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